Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP11_FL5_D21
(814 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 65 6e-13
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 64 2e-12
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 61 1e-11
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 61 1e-11
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 60 2e-11
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 60 3e-11
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 59 4e-11
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 59 4e-11
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 59 4e-11
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 58 7e-11
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 58 1e-10
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 57 2e-10
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 57 2e-10
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 57 2e-10
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 56 3e-10
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 56 4e-10
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 56 4e-10
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 55 7e-10
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 55 7e-10
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 52 5e-09
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 50 2e-08
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 43 4e-06
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 42 9e-06
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 33 0.003
DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated... 31 0.017
DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated... 29 0.051
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 22 7.8
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 65.3 bits (152), Expect = 6e-13
Identities = 50/168 (29%), Positives = 75/168 (44%), Gaps = 9/168 (5%)
Frame = +3
Query: 93 IASAAECENATSLSLMIDSLLATYDRESPPDSK----IVVNLTLHLRHA---NIRESEST 251
I SA C + D LL+ Y+R P S +VV L L L N+++ T
Sbjct: 9 ILSARICHGNPDAKRLYDDLLSNYNRLIRPVSNNNDTVVVKLGLRLSQLIDLNLKDQILT 68
Query: 252 VRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL-RAR 425
+ L+ W D + W+ E+G T L V SE +W PD+VL N A G + +A
Sbjct: 69 TNVW--LEHEWQDHKFQWDPAEYGGVTELYVPSEHIWLPDIVLYNNADGEYGVTTMTKAI 126
Query: 426 VSNNGSVSWIKRLDIXTPISMQLDNWPNDMXTCPXKFGSRMHNSDEMD 569
+ G V W + + + +P D TC KFGS ++ ++D
Sbjct: 127 LHYTGKVLWTPPAIFKSSCEIDVRYFPFDQQTCFMKFGSWTYDGIQID 174
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 63.7 bits (148), Expect = 2e-12
Identities = 41/149 (27%), Positives = 70/149 (46%), Gaps = 7/149 (4%)
Frame = +3
Query: 117 NATSLSLMIDSLLATYDRESPPD---SKIVVNLTLHLRHAN-IRESESTVRILADLQMNW 284
N +++S ++D+LL YD PD V + + +R I E + T + + +W
Sbjct: 2 NHSNISELLDNLLRGYDNSVRPDFGGPPATVEVDIMVRSMGPISEVDMTYSMDCYFRQSW 61
Query: 285 IDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAAAT---TAGDYALRARVSNNGSVSWI 455
+D+RL++ G+ + + R+W+PD N + T R+ +G V +
Sbjct: 62 VDRRLAFQGGKETLALSISMLARIWKPDTYFYNGKHSYLHTITSPNKFVRLYQDGRVLYS 121
Query: 456 KRLDIXTPISMQLDNWPNDMXTCPXKFGS 542
RL I M L+N+P D CP +FGS
Sbjct: 122 SRLTIKAGCPMNLENFPMDTQRCPLQFGS 150
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 61.3 bits (142), Expect = 1e-11
Identities = 41/162 (25%), Positives = 73/162 (45%), Gaps = 9/162 (5%)
Frame = +3
Query: 111 CENATSLSLMIDSLLATYDRESPPDSKIVVNLTLHLR-------HANIRESESTVRILAD 269
C + D LL+ Y++ P + LT+ ++ N++ T +
Sbjct: 19 CSGNPDAKRLYDDLLSNYNKLVRPVVNVTDALTVKIKLKLSQLIDVNLKNQIMTTNLW-- 76
Query: 270 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGS 443
++ +W D +L W+ E+G L V S+ +WRPD+VL N A A +A ++ G
Sbjct: 77 VEQSWYDYKLKWDPKEYGGVEMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGR 136
Query: 444 VSWIKRLDIXTPISMQLDNWPNDMXTCPXKFGSRMHNSDEMD 569
V W + + ++ +P D TC KFGS ++ ++D
Sbjct: 137 VEWKPPAIYKSSCEIDVEYFPFDEQTCVMKFGSWTYDGFQVD 178
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 60.9 bits (141), Expect = 1e-11
Identities = 45/154 (29%), Positives = 73/154 (47%), Gaps = 10/154 (6%)
Frame = +3
Query: 138 MIDSLLATYDRESPPDSKIVVNLT--LHLRHANIRESESTVRILAD---LQMNWIDKRLS 302
+ D LL+ Y+R P LT L L+ + + E +++ ++ W D +L
Sbjct: 37 LYDDLLSNYNRLIRPVMNNTETLTVQLGLKLSQLIEMNLKNQVMTTNVWVEQRWNDYKLK 96
Query: 303 WNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSWIKRLD 467
WN E+G L V SE +W PD+VL N A G+Y + +A + G VSW
Sbjct: 97 WNPEEYGGVEMLYVPSENIWLPDIVLYNNAD---GNYEVTLMTKATLKYTGDVSWKPPAI 153
Query: 468 IXTPISMQLDNWPNDMXTCPXKFGSRMHNSDEMD 569
+ + ++ +P D +C KFGS +N ++D
Sbjct: 154 YKSSCEINVEYFPFDEQSCIMKFGSWTYNGAQVD 187
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 60.1 bits (139), Expect = 2e-11
Identities = 36/136 (26%), Positives = 66/136 (48%), Gaps = 6/136 (4%)
Frame = +3
Query: 189 KIVVNLTL-HLRHANIRESESTVRILADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWR 362
K+ VN L ++ N+ E ++ L+ W D +L W+ ++G + +++W+
Sbjct: 51 KVHVNFGLAFVQLINVNEKNQIMKSNVWLRFIWTDYQLQWDEADYGGIGVLRLPPDKVWK 110
Query: 363 PDVVLLNAAATTAGDYALRAR----VSNNGSVSWIKRLDIXTPISMQLDNWPNDMXTCPX 530
PD+VL N A G+Y +R + + NG V W+ + ++ + +P D TC
Sbjct: 111 PDIVLFNNAD---GNYEVRYKSNVLIYPNGDVLWVPPAIYQSSCTIDVTYFPFDQQTCIM 167
Query: 531 KFGSRMHNSDEMDFXI 578
KFGS N D++ +
Sbjct: 168 KFGSWTFNGDQVSLAL 183
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 59.7 bits (138), Expect = 3e-11
Identities = 41/164 (25%), Positives = 75/164 (45%), Gaps = 8/164 (4%)
Frame = +3
Query: 114 ENATSLSLMIDSLLATYDRESPPDS--KIVVNLTLHL--RHANIRESESTVRILADLQMN 281
++ T+L + L YD P S +I N+T+ L + + S + + + + +
Sbjct: 39 DHPTTLLKLKRYLFCEYDPNVRPISSHQIANNVTMQLLPKLMEFDDWTSVMELHSWMTLM 98
Query: 282 WIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAAATT---AGDYALRARVSNNGSVS 449
W D LSW ++ G + V S+ +W PD+ + N+ T G V ++GSVS
Sbjct: 99 WTDSHLSWKPSDFDGINYIYVKSDDIWVPDISVYNSGDMTFDQTGIPPTTCLVFSSGSVS 158
Query: 450 WIKRLDIXTPISMQLDNWPNDMXTCPXKFGSRMHNSDEMDFXID 581
+ + + +WP D C FGS +H+ +E++ +D
Sbjct: 159 CVPSVKHVAKCATDFSSWPYDTHRCRINFGSWVHSGEEVNIFLD 202
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 59.3 bits (137), Expect = 4e-11
Identities = 36/154 (23%), Positives = 74/154 (48%), Gaps = 7/154 (4%)
Frame = +3
Query: 138 MIDSLLATYDRESPP----DSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLS 302
+++ LL++Y+ P + V + L+ ++ E + A L++ W+D L
Sbjct: 58 LLNELLSSYNTLERPVANESEPLEVKFGITLQQIIDVDEKNQILTTNAWLKLEWVDYNLQ 117
Query: 303 WNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWIKRLDIXT 476
WN E+ G ++ +LW+PD+++ N+A G Y V++NGS ++ +
Sbjct: 118 WNESEYGGVKDLRITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNGSCLYVPPGIFKS 177
Query: 477 PISMQLDNWPNDMXTCPXKFGSRMHNSDEMDFXI 578
+ + +P D C KFGS ++ +++D +
Sbjct: 178 TCKIDITWFPFDDQHCDMKFGSWTYDGNQVDLVL 211
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 59.3 bits (137), Expect = 4e-11
Identities = 36/154 (23%), Positives = 74/154 (48%), Gaps = 7/154 (4%)
Frame = +3
Query: 138 MIDSLLATYDRESPP----DSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLS 302
+++ LL++Y+ P + V + L+ ++ E + A L++ W+D L
Sbjct: 58 LLNELLSSYNTLERPVANESEPLEVKFGITLQQIIDVDEKNQILTTNAWLKLEWVDYNLQ 117
Query: 303 WNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWIKRLDIXT 476
WN E+ G ++ +LW+PD+++ N+A G Y V++NGS ++ +
Sbjct: 118 WNESEYGGVKDLRITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNGSCLYVPPGIFKS 177
Query: 477 PISMQLDNWPNDMXTCPXKFGSRMHNSDEMDFXI 578
+ + +P D C KFGS ++ +++D +
Sbjct: 178 TCKIDITWFPFDDQHCDMKFGSWTYDGNQVDLVL 211
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 59.3 bits (137), Expect = 4e-11
Identities = 39/151 (25%), Positives = 74/151 (49%), Gaps = 7/151 (4%)
Frame = +3
Query: 138 MIDSLLATYDRESPP--DSKIVVNLTLHLRHANIRESESTVRILAD---LQMNWIDKRLS 302
+ D LL+ Y++ P ++ V+ + + L+ + + + +I+ ++ +W D +L
Sbjct: 32 LYDDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLR 91
Query: 303 WNAGEWGCSTWL-VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWIKRLDIXT 476
W E+G L V S+ +WRPD+VL N A A +A + + G V W +
Sbjct: 92 WEPKEYGGVKMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATIYHQGLVEWKPPAIYKS 151
Query: 477 PISMQLDNWPNDMXTCPXKFGSRMHNSDEMD 569
+ ++ +P D TC KFGS ++ ++D
Sbjct: 152 SCEIDVEYFPFDEQTCVLKFGSWTYDGFKVD 182
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 58.4 bits (135), Expect = 7e-11
Identities = 30/119 (25%), Positives = 59/119 (49%), Gaps = 2/119 (1%)
Frame = +3
Query: 228 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 401
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 402 GDYALRARVSNNGSVSWIKRLDIXTPISMQLDNWPNDMXTCPXKFGSRMHNSDEMDFXI 578
G Y V++NGS ++ + + + +P D C KFGS ++ +++D +
Sbjct: 85 GTYQTSVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 57.6 bits (133), Expect = 1e-10
Identities = 30/119 (25%), Positives = 59/119 (49%), Gaps = 2/119 (1%)
Frame = +3
Query: 228 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 401
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 402 GDYALRARVSNNGSVSWIKRLDIXTPISMQLDNWPNDMXTCPXKFGSRMHNSDEMDFXI 578
G Y V+++GS ++ + M + +P D C KFGS ++ +++D +
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKMDIAWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 57.2 bits (132), Expect = 2e-10
Identities = 30/119 (25%), Positives = 59/119 (49%), Gaps = 2/119 (1%)
Frame = +3
Query: 228 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 401
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 402 GDYALRARVSNNGSVSWIKRLDIXTPISMQLDNWPNDMXTCPXKFGSRMHNSDEMDFXI 578
G Y V+++GS ++ + M + +P D C KFGS ++ +++D +
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKMDVAWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 57.2 bits (132), Expect = 2e-10
Identities = 45/174 (25%), Positives = 77/174 (44%), Gaps = 12/174 (6%)
Frame = +3
Query: 84 TCAIASAAECENATSLSLMIDSLLATYDRESPP----DSKIVVNLTLHLRH---ANIRES 242
+C +A + + D LL+ Y+R P ++ V + L L N++
Sbjct: 6 SCLVAPFPGASANSEAKRLYDDLLSNYNRLIRPVGNNSDRLTVKMGLRLSQLIDVNLKNQ 65
Query: 243 ESTVRILADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLNAAATTAGDYAL- 416
T + ++ W D +L WN ++G T V SE +W PD+VL N A G+Y +
Sbjct: 66 IMTTNVW--VEQEWNDYKLKWNPDDYGGVDTLHVPSEHIWLPDIVLYNNA---DGNYEVT 120
Query: 417 ---RARVSNNGSVSWIKRLDIXTPISMQLDNWPNDMXTCPXKFGSRMHNSDEMD 569
+A + + G V W + + ++ +P D TC KFGS ++ +D
Sbjct: 121 IMTKAILHHTGKVVWKPPAIYKSFCEIDVEYFPFDEQTCFMKFGSWTYDGYTVD 174
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 56.8 bits (131), Expect = 2e-10
Identities = 41/154 (26%), Positives = 78/154 (50%), Gaps = 10/154 (6%)
Frame = +3
Query: 138 MIDSLLATYDRESPP--DSKIVVNLTLHLRHANIRESESTVRILAD---LQMNWIDKRLS 302
+ D LL+ Y++ P ++ V+ + + L+ + + + +I+ ++ +W D +L
Sbjct: 32 LYDDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLR 91
Query: 303 WNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSWIKRLD 467
W E+G L V S+ +WRPD+VL N A G+Y + +A V +G V W
Sbjct: 92 WEPKEYGGVKMLHVPSDHIWRPDIVLYNNA---DGNYEVTLMTKATVYYSGLVVWQPPAV 148
Query: 468 IXTPISMQLDNWPNDMXTCPXKFGSRMHNSDEMD 569
+ S+ ++ +P D+ TC K GS ++ ++D
Sbjct: 149 YKSSCSIDVEFFPYDVQTCVLKLGSWTYDGFKVD 182
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 56.4 bits (130), Expect = 3e-10
Identities = 29/119 (24%), Positives = 59/119 (49%), Gaps = 2/119 (1%)
Frame = +3
Query: 228 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 401
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 402 GDYALRARVSNNGSVSWIKRLDIXTPISMQLDNWPNDMXTCPXKFGSRMHNSDEMDFXI 578
G Y V+++GS ++ + + + +P D C KFGS ++ +++D +
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 56.0 bits (129), Expect = 4e-10
Identities = 29/119 (24%), Positives = 59/119 (49%), Gaps = 2/119 (1%)
Frame = +3
Query: 228 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 401
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 402 GDYALRARVSNNGSVSWIKRLDIXTPISMQLDNWPNDMXTCPXKFGSRMHNSDEMDFXI 578
G Y V+++GS ++ + + + +P D C KFGS ++ +++D +
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKIDIAWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 56.0 bits (129), Expect = 4e-10
Identities = 29/119 (24%), Positives = 59/119 (49%), Gaps = 2/119 (1%)
Frame = +3
Query: 228 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 401
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 402 GDYALRARVSNNGSVSWIKRLDIXTPISMQLDNWPNDMXTCPXKFGSRMHNSDEMDFXI 578
G Y V+++GS ++ + + + +P D C KFGS ++ +++D +
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFGSTCKIDIAWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 55.2 bits (127), Expect = 7e-10
Identities = 41/162 (25%), Positives = 75/162 (46%), Gaps = 10/162 (6%)
Frame = +3
Query: 111 CENATSLSLMIDS---LLATYDRESPPDSKIV--VNLTLHLRHANIRESESTVRILADLQ 275
C++ TS S + L YDR+ P+ K ++ L ++H N+ E TV L+
Sbjct: 28 CKDITSTSALYRLKLYLFCDYDRDIIPEQKNATKIDFGLSIQHYNVDEYSHTVDFHVMLK 87
Query: 276 MNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVL--LNAAATTAGDYALRARVSNNGSV 446
+ W L+W + E+ ++ V S +W PD+V+ + + ++ V N+G++
Sbjct: 88 LMWEQSHLTWKSSEFDSINSIRVKSYEIWVPDIVMHSVTSVGIDLEMPSVECIVFNSGTI 147
Query: 447 SWIKRLDIXTPISMQLDN--WPNDMXTCPXKFGSRMHNSDEM 566
+ TP+ + D+ WP D+ C S H S+E+
Sbjct: 148 LCVP-FTTYTPV-CEYDHTWWPYDILNCTIHIASWSHGSNEI 187
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 55.2 bits (127), Expect = 7e-10
Identities = 41/170 (24%), Positives = 79/170 (46%), Gaps = 7/170 (4%)
Frame = +3
Query: 90 AIASAAECENATSLSLMIDSLLATYD-RESPPDSK---IVVNLTLHLRHA-NIRESESTV 254
A+A++ + +++ LL TY+ E P ++ +V++ L L ++ E +
Sbjct: 11 ALAASGLVNGGSHEKRLLNDLLDTYNVLERPVGNESEPLVLSFGLTLMQIIDVDEKNQLL 70
Query: 255 RILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTA-GDYALRARV 428
L++ W D + WN ++G L + RLW+PDV++ N+A G Y V
Sbjct: 71 ITNLWLKLEWNDVNMRWNVSDYGGVRDLRIPPHRLWKPDVLMYNSADEGFDGTYPTNVVV 130
Query: 429 SNNGSVSWIKRLDIXTPISMQLDNWPNDMXTCPXKFGSRMHNSDEMDFXI 578
NNG+ ++ + + + +P D C KFGS ++ ++D +
Sbjct: 131 KNNGTCLYVPPGIFKSTCKIDITWFPFDDQRCEMKFGSWTYDGFQLDLQL 180
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 52.4 bits (120), Expect = 5e-09
Identities = 36/147 (24%), Positives = 65/147 (44%), Gaps = 8/147 (5%)
Frame = +3
Query: 126 SLSLMIDSLLATYDRESPPD----SKIVVNLTLHLRHAN-IRESESTVRILADLQMNWID 290
++++++++LL Y+ P + VV + +R + E + + + +W D
Sbjct: 36 NITMVLENLLMNYENNQLPTHGKGTPTVVKTNILIRSMGPVSELDMDYSMDCYFRQSWRD 95
Query: 291 KRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSWIKR 461
RLS+ S + ER+WRPD N + + R+S +G + + R
Sbjct: 96 SRLSFLGPIKSLSLSIKMLERIWRPDTYFYNGKHSYVHTITVPNKLLRISQDGDILYSMR 155
Query: 462 LDIXTPISMQLDNWPNDMXTCPXKFGS 542
L I M+L N+P D +CP GS
Sbjct: 156 LTIKAKCPMELRNFPMDRQSCPLILGS 182
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 50.4 bits (115), Expect = 2e-08
Identities = 32/129 (24%), Positives = 55/129 (42%), Gaps = 3/129 (2%)
Frame = +3
Query: 192 IVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPD 368
+V L+LH ++ E + + W D L WNA E+ G V R+WRPD
Sbjct: 33 VVFGLSLH-HIIDVDEKNQILTTNCWVTQIWTDHHLKWNASEFAGIRVIRVPYNRVWRPD 91
Query: 369 VVLLNAAATTAGDYALRAR--VSNNGSVSWIKRLDIXTPISMQLDNWPNDMXTCPXKFGS 542
+L N A + VS+ G V W+ + + ++ +P D C K+ S
Sbjct: 92 TILYNNADPQYSSAVINTNVIVSHTGEVVWLSHGIFRSSCDIDVEFFPFDEQRCVLKWAS 151
Query: 543 RMHNSDEMD 569
++ +++
Sbjct: 152 WTYDGYQLE 160
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 42.7 bits (96), Expect = 4e-06
Identities = 38/149 (25%), Positives = 68/149 (45%), Gaps = 13/149 (8%)
Frame = +3
Query: 117 NATSLSLMIDSLLATYDRESPPD---SKIVVNLTLH-LRHANIRESESTVRILADLQMNW 284
N ++S ++DS +YD+ P+ + V +T++ L +++ E + + + W
Sbjct: 8 NDVNISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSLSEVKMDFTLDFYFRQFW 67
Query: 285 IDKRLSWNAGEWGCSTWLVSSE---RLWRPDVVLLNA------AATTAGDYALRARVSNN 437
D RL++ G T V SE +W PD +N ATT+ ++ R+ ++
Sbjct: 68 TDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEF---IRIHHS 123
Query: 438 GSVSWIKRLDIXTPISMQLDNWPNDMXTC 524
GS++ RL I M L +P D C
Sbjct: 124 GSITRSIRLTITASCPMNLQYFPMDRQLC 152
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 41.5 bits (93), Expect = 9e-06
Identities = 38/149 (25%), Positives = 67/149 (44%), Gaps = 13/149 (8%)
Frame = +3
Query: 117 NATSLSLMIDSLLATYDRESPPD---SKIVVNLTLH-LRHANIRESESTVRILADLQMNW 284
N ++S ++DS +YD+ P+ + V +T++ L +++ E + + W
Sbjct: 8 NDVNISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSVSEVLMDFTLDFYFRQFW 67
Query: 285 IDKRLSWNAGEWGCSTWLVSSE---RLWRPDVVLLNA------AATTAGDYALRARVSNN 437
D RL++ G T V SE +W PD +N ATT+ ++ R+ ++
Sbjct: 68 TDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEF---IRIHHS 123
Query: 438 GSVSWIKRLDIXTPISMQLDNWPNDMXTC 524
GS++ RL I M L +P D C
Sbjct: 124 GSITRSIRLTITASCPMNLQYFPMDRQLC 152
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 33.1 bits (72), Expect = 0.003
Identities = 19/81 (23%), Positives = 36/81 (44%), Gaps = 3/81 (3%)
Frame = +3
Query: 348 ERLWRPDVVLLNAAATTAGDYALRAR---VSNNGSVSWIKRLDIXTPISMQLDNWPNDMX 518
+ +WRPD NA + T + + + ++ ++ +L + +M +P+D
Sbjct: 116 KNMWRPDSFFKNAKSVTFQTMTIPNHYLWLYKDKTILYMVKLTLKLSCAMNFLIYPHDTQ 175
Query: 519 TCPXKFGSRMHNSDEMDFXID 581
C + S H +DEM F D
Sbjct: 176 ECKLQMESLSHTTDEMIFQWD 196
>DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 469
Score = 30.7 bits (66), Expect = 0.017
Identities = 20/74 (27%), Positives = 34/74 (45%), Gaps = 3/74 (4%)
Frame = +3
Query: 354 LWRPDVVLLN--AAATTAGDYA-LRARVSNNGSVSWIKRLDIXTPISMQLDNWPNDMXTC 524
+W P V + N ++A T + + + +G V RL ++L+ +P D+ C
Sbjct: 97 IWTPTVYVSNEPSSAITGNNVKDVLVSIDPSGMVRLNTRLQATLNCGLRLEKFPFDVQEC 156
Query: 525 PXKFGSRMHNSDEM 566
P F S HN +M
Sbjct: 157 PLIFESWTHNVLDM 170
>DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 391
Score = 29.1 bits (62), Expect = 0.051
Identities = 28/136 (20%), Positives = 57/136 (41%), Gaps = 11/136 (8%)
Frame = +3
Query: 192 IVVNLTLHLRHAN-IRESESTVRILADLQMNWIDKRLS-----WNAGEWGCSTWLVSSER 353
++V+ + + N I + R+ ++ +WI+ RL + G+ + +
Sbjct: 11 VLVDFNIFVADINSINVEDMDFRVDMFVRQSWIESRLDMPDYIFEEGDDYVTLPPEFFDS 70
Query: 354 LWRPDVVLLNAAATTAGDYALRARVSN-----NGSVSWIKRLDIXTPISMQLDNWPNDMX 518
LW+PD LNA + AL + S+ N +V + R+ M+ +P D+
Sbjct: 71 LWQPDPYFLNAKVSEIA--ALNHKFSSVTLYRNKTVKYSARMHAIIACQMEFQLYPMDIQ 128
Query: 519 TCPXKFGSRMHNSDEM 566
CP S ++ ++
Sbjct: 129 ICPIYIESFSYHKQKL 144
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 21.8 bits (44), Expect = 7.8
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = -3
Query: 335 PSAAAPFPCVPTQS 294
PSA AP P +P S
Sbjct: 411 PSAGAPMPPIPNMS 424
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 207,958
Number of Sequences: 438
Number of extensions: 4290
Number of successful extensions: 77
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 45
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25853301
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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