Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP11_FL5_D11
(841 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 60 2e-11
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 60 2e-11
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 60 2e-11
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 59 4e-11
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 59 6e-11
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 59 6e-11
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 59 6e-11
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 58 8e-11
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 58 1e-10
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 58 1e-10
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 58 1e-10
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 57 2e-10
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 57 2e-10
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 56 4e-10
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 56 4e-10
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 55 9e-10
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 53 4e-09
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 52 7e-09
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 50 3e-08
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 49 5e-08
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 47 2e-07
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 43 3e-06
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 40 2e-05
DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 40 3e-05
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 38 9e-05
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 38 9e-05
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 38 9e-05
DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chlor... 35 0.001
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 35 0.001
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 32 0.006
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 32 0.006
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 32 0.006
DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated... 31 0.010
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 29 0.040
DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated... 28 0.093
AF134816-1|AAD40232.1| 50|Apis mellifera unknown protein. 22 6.1
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 22 8.1
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 60.5 bits (140), Expect = 2e-11
Identities = 32/116 (27%), Positives = 59/116 (50%), Gaps = 2/116 (1%)
Frame = +1
Query: 193 NIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTA- 366
++ E + A L++ W+D L WN E+G L ++ +LW+PD+++ N+A
Sbjct: 93 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 152
Query: 367 GDYALRARVSNNGSVSXIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMD 534
G Y V++NGS + + + + +P D Q C KFGS ++ +++D
Sbjct: 153 GTYQTNVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQVD 208
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 60.5 bits (140), Expect = 2e-11
Identities = 32/116 (27%), Positives = 59/116 (50%), Gaps = 2/116 (1%)
Frame = +1
Query: 193 NIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTA- 366
++ E + A L++ W+D L WN E+G L ++ +LW+PD+++ N+A
Sbjct: 93 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 152
Query: 367 GDYALRARVSNNGSVSXIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMD 534
G Y V++NGS + + + + +P D Q C KFGS ++ +++D
Sbjct: 153 GTYQTNVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQVD 208
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 60.1 bits (139), Expect = 2e-11
Identities = 32/116 (27%), Positives = 59/116 (50%), Gaps = 2/116 (1%)
Frame = +1
Query: 193 NIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTA- 366
++ E + A L++ W+D L WN E+G L ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 367 GDYALRARVSNNGSVSXIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMD 534
G Y V++NGS + + + + +P D Q C KFGS ++ +++D
Sbjct: 85 GTYQTSVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQVD 140
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 59.3 bits (137), Expect = 4e-11
Identities = 32/116 (27%), Positives = 59/116 (50%), Gaps = 2/116 (1%)
Frame = +1
Query: 193 NIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTA- 366
++ E + A L++ W+D L WN E+G L ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 367 GDYALRARVSNNGSVSXIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMD 534
G Y V+++GS + + M + +P D Q C KFGS ++ +++D
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKMDIAWFPFDDQHCDMKFGSWTYDGNQVD 140
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 58.8 bits (136), Expect = 6e-11
Identities = 31/116 (26%), Positives = 58/116 (50%), Gaps = 2/116 (1%)
Frame = +1
Query: 193 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 366
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 367 GDYALRARVSNNGSVSXIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMD 534
G Y V+++GS + + M + +P D Q C KFGS ++ +++D
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKMDVAWFPFDDQHCDMKFGSWTYDGNQVD 140
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 58.8 bits (136), Expect = 6e-11
Identities = 36/132 (27%), Positives = 65/132 (49%), Gaps = 6/132 (4%)
Frame = +1
Query: 154 KIVVNLTL-HLRHANIRESESTVRILADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWR 327
K+ VN L ++ N+ E ++ L+ W D +L W+ ++G + +++W+
Sbjct: 51 KVHVNFGLAFVQLINVNEKNQIMKSNVWLRFIWTDYQLQWDEADYGGIGVLRLPPDKVWK 110
Query: 328 PDVVLLNAAATTAGDYALRAR----VSNNGSVSXIKRLDISTPISMQLDNWPNDMQTCTF 495
PD+VL N A G+Y +R + + NG V + + ++ + +P D QTC
Sbjct: 111 PDIVLFNNAD---GNYEVRYKSNVLIYPNGDVLWVPPAIYQSSCTIDVTYFPFDQQTCIM 167
Query: 496 KFGSRMHNSDEM 531
KFGS N D++
Sbjct: 168 KFGSWTFNGDQV 179
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 58.8 bits (136), Expect = 6e-11
Identities = 32/104 (30%), Positives = 53/104 (50%), Gaps = 2/104 (1%)
Frame = +1
Query: 235 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGS 408
++ +W D +L W+ E+G L V S+ +WRPD+VL N A A +A ++ G
Sbjct: 77 VEQSWYDYKLKWDPKEYGGVEMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGR 136
Query: 409 VSXIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFR 540
V + + ++ +P D QTC KFGS ++ ++D R
Sbjct: 137 VEWKPPAIYKSSCEIDVEYFPFDEQTCVMKFGSWTYDGFQVDLR 180
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 58.4 bits (135), Expect = 8e-11
Identities = 37/132 (28%), Positives = 63/132 (47%), Gaps = 3/132 (2%)
Frame = +1
Query: 154 KIVVNLTL-HLRHANIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWR 327
++ + L L L N++ T + ++ +W D +L W E+G L V S+ +WR
Sbjct: 55 RVCIKLKLSQLIDVNLKNQIMTTNLW--VEQSWYDYKLRWEPKEYGGVKMLHVPSDHIWR 112
Query: 328 PDVVLLNAA-ATTAGDYALRARVSNNGSVSXIKRLDISTPISMQLDNWPNDMQTCTFKFG 504
PD+VL N A A +A + + G V + + ++ +P D QTC KFG
Sbjct: 113 PDIVLYNNADGNFEVTLATKATIYHQGLVEWKPPAIYKSSCEIDVEYFPFDEQTCVLKFG 172
Query: 505 SRMHNSDEMDFR 540
S ++ ++D R
Sbjct: 173 SWTYDGFKVDLR 184
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 58.0 bits (134), Expect = 1e-10
Identities = 30/116 (25%), Positives = 58/116 (50%), Gaps = 2/116 (1%)
Frame = +1
Query: 193 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 366
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 367 GDYALRARVSNNGSVSXIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMD 534
G Y V+++GS + + + + +P D Q C KFGS ++ +++D
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQVD 140
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 57.6 bits (133), Expect = 1e-10
Identities = 30/116 (25%), Positives = 58/116 (50%), Gaps = 2/116 (1%)
Frame = +1
Query: 193 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 366
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 367 GDYALRARVSNNGSVSXIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMD 534
G Y V+++GS + + + + +P D Q C KFGS ++ +++D
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKIDIAWFPFDDQHCDMKFGSWTYDGNQVD 140
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 57.6 bits (133), Expect = 1e-10
Identities = 30/116 (25%), Positives = 58/116 (50%), Gaps = 2/116 (1%)
Frame = +1
Query: 193 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 366
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 367 GDYALRARVSNNGSVSXIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMD 534
G Y V+++GS + + + + +P D Q C KFGS ++ +++D
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFGSTCKIDIAWFPFDDQHCDMKFGSWTYDGNQVD 140
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 57.2 bits (132), Expect = 2e-10
Identities = 40/139 (28%), Positives = 65/139 (46%), Gaps = 5/139 (3%)
Frame = +1
Query: 157 IVVNLTLHLRHA---NIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLW 324
+VV L L L N+++ T + L+ W D + W+ E+G T L V SE +W
Sbjct: 46 VVVKLGLRLSQLIDLNLKDQILTTNVW--LEHEWQDHKFQWDPAEYGGVTELYVPSEHIW 103
Query: 325 RPDVVLLNAAATTAGDYAL-RARVSNNGSVSXIKRLDISTPISMQLDNWPNDMQTCTFKF 501
PD+VL N A G + +A + G V + + + +P D QTC KF
Sbjct: 104 LPDIVLYNNADGEYGVTTMTKAILHYTGKVLWTPPAIFKSSCEIDVRYFPFDQQTCFMKF 163
Query: 502 GSRMHNSDEMDFRD*QKNI 558
GS ++ ++D + +N+
Sbjct: 164 GSWTYDGIQIDLKHINQNM 182
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 57.2 bits (132), Expect = 2e-10
Identities = 34/107 (31%), Positives = 54/107 (50%), Gaps = 5/107 (4%)
Frame = +1
Query: 235 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL----RARVSN 399
++ W D +L WN E+G L V SE +W PD+VL N A G+Y + +A +
Sbjct: 86 VEQRWNDYKLKWNPEEYGGVEMLYVPSENIWLPDIVLYNNAD---GNYEVTLMTKATLKY 142
Query: 400 NGSVSXIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFR 540
G VS + + ++ +P D Q+C KFGS +N ++D +
Sbjct: 143 TGDVSWKPPAIYKSSCEINVEYFPFDEQSCIMKFGSWTYNGAQVDLK 189
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 56.0 bits (129), Expect = 4e-10
Identities = 39/135 (28%), Positives = 67/135 (49%), Gaps = 6/135 (4%)
Frame = +1
Query: 154 KIVVNLTL-HLRHANIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWR 327
++ + L L L N++ T + ++ +W D +L W E+G L V S+ +WR
Sbjct: 55 RVCIKLKLSQLIDVNLKNQIMTTNLW--VEQSWYDYKLRWEPKEYGGVKMLHVPSDHIWR 112
Query: 328 PDVVLLNAAATTAGDYAL----RARVSNNGSVSXIKRLDISTPISMQLDNWPNDMQTCTF 495
PD+VL N A G+Y + +A V +G V + S+ ++ +P D+QTC
Sbjct: 113 PDIVLYNNAD---GNYEVTLMTKATVYYSGLVVWQPPAVYKSSCSIDVEFFPYDVQTCVL 169
Query: 496 KFGSRMHNSDEMDFR 540
K GS ++ ++D R
Sbjct: 170 KLGSWTYDGFKVDLR 184
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 56.0 bits (129), Expect = 4e-10
Identities = 30/104 (28%), Positives = 51/104 (49%), Gaps = 2/104 (1%)
Frame = +1
Query: 235 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGS 408
L++ W D + WN ++G L + RLW+PDV++ N+A G Y V NNG+
Sbjct: 76 LKLEWNDVNMRWNVSDYGGVRDLRIPPHRLWKPDVLMYNSADEGFDGTYPTNVVVKNNGT 135
Query: 409 VSXIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFR 540
+ + + + +P D Q C KFGS ++ ++D +
Sbjct: 136 CLYVPPGIFKSTCKIDITWFPFDDQRCEMKFGSWTYDGFQLDLQ 179
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 54.8 bits (126), Expect = 9e-10
Identities = 33/133 (24%), Positives = 62/133 (46%), Gaps = 6/133 (4%)
Frame = +1
Query: 154 KIVVNLTLHL--RHANIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLW 324
+I N+T+ L + + S + + + + + W D LSW ++ G + V S+ +W
Sbjct: 66 QIANNVTMQLLPKLMEFDDWTSVMELHSWMTLMWTDSHLSWKPSDFDGINYIYVKSDDIW 125
Query: 325 RPDVVLLNAAATT---AGDYALRARVSNNGSVSXIKRLDISTPISMQLDNWPNDMQTCTF 495
PD+ + N+ T G V ++GSVS + + + +WP D C
Sbjct: 126 VPDISVYNSGDMTFDQTGIPPTTCLVFSSGSVSCVPSVKHVAKCATDFSSWPYDTHRCRI 185
Query: 496 KFGSRMHNSDEMD 534
FGS +H+ +E++
Sbjct: 186 NFGSWVHSGEEVN 198
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 52.8 bits (121), Expect = 4e-09
Identities = 40/145 (27%), Positives = 67/145 (46%), Gaps = 6/145 (4%)
Frame = +1
Query: 124 RTIGSLPPYSKIVVNLTL-HLRHANIRESESTVRILADLQMNWIDKRLSWNAGEWG-CST 297
R +G+ + + L L L N++ T + ++ W D +L WN ++G T
Sbjct: 37 RPVGNNSDRLTVKMGLRLSQLIDVNLKNQIMTTNVW--VEQEWNDYKLKWNPDDYGGVDT 94
Query: 298 WLVSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSXIKRLDISTPISMQLDN 465
V SE +W PD+VL N A G+Y + +A + + G V + + ++
Sbjct: 95 LHVPSEHIWLPDIVLYNNA---DGNYEVTIMTKAILHHTGKVVWKPPAIYKSFCEIDVEY 151
Query: 466 WPNDMQTCTFKFGSRMHNSDEMDFR 540
+P D QTC KFGS ++ +D R
Sbjct: 152 FPFDEQTCFMKFGSWTYDGYTVDLR 176
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 52.0 bits (119), Expect = 7e-09
Identities = 30/107 (28%), Positives = 49/107 (45%), Gaps = 3/107 (2%)
Frame = +1
Query: 196 IRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAAAT---TA 366
I E + T + + +W+D+RL++ G+ + + R+W+PD N + T
Sbjct: 44 ISEVDMTYSMDCYFRQSWVDRRLAFQGGKETLALSISMLARIWKPDTYFYNGKHSYLHTI 103
Query: 367 GDYALRARVSNNGSVSXIKRLDISTPISMQLDNWPNDMQTCTFKFGS 507
R+ +G V RL I M L+N+P D Q C +FGS
Sbjct: 104 TSPNKFVRLYQDGRVLYSSRLTIKAGCPMNLENFPMDTQRCPLQFGS 150
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 50.0 bits (114), Expect = 3e-08
Identities = 32/128 (25%), Positives = 61/128 (47%), Gaps = 5/128 (3%)
Frame = +1
Query: 163 VNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVV 339
++ L ++H N+ E TV L++ W L+W + E+ ++ V S +W PD+V
Sbjct: 62 IDFGLSIQHYNVDEYSHTVDFHVMLKLMWEQSHLTWKSSEFDSINSIRVKSYEIWVPDIV 121
Query: 340 L--LNAAATTAGDYALRARVSNNGSVSXIKRLDISTPISMQLDN--WPNDMQTCTFKFGS 507
+ + + ++ V N+G++ + TP+ + D+ WP D+ CT S
Sbjct: 122 MHSVTSVGIDLEMPSVECIVFNSGTILCVP-FTTYTPV-CEYDHTWWPYDILNCTIHIAS 179
Query: 508 RMHNSDEM 531
H S+E+
Sbjct: 180 WSHGSNEI 187
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 49.2 bits (112), Expect = 5e-08
Identities = 32/129 (24%), Positives = 55/129 (42%), Gaps = 3/129 (2%)
Frame = +1
Query: 157 IVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPD 333
+V L+LH ++ E + + W D L WNA E+ G V R+WRPD
Sbjct: 33 VVFGLSLH-HIIDVDEKNQILTTNCWVTQIWTDHHLKWNASEFAGIRVIRVPYNRVWRPD 91
Query: 334 VVLLNAAATTAGDYALRAR--VSNNGSVSXIKRLDISTPISMQLDNWPNDMQTCTFKFGS 507
+L N A + VS+ G V + + + ++ +P D Q C K+ S
Sbjct: 92 TILYNNADPQYSSAVINTNVIVSHTGEVVWLSHGIFRSSCDIDVEFFPFDEQRCVLKWAS 151
Query: 508 RMHNSDEMD 534
++ +++
Sbjct: 152 WTYDGYQLE 160
Score = 21.8 bits (44), Expect = 8.1
Identities = 8/24 (33%), Positives = 14/24 (58%)
Frame = -3
Query: 560 CIFFCQSRKSISSLLCILEPNLNV 489
C+FF + S + +LC P+ N+
Sbjct: 434 CVFFLTTIVSTTVILCGSPPSANI 457
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 47.2 bits (107), Expect = 2e-07
Identities = 28/93 (30%), Positives = 41/93 (44%), Gaps = 3/93 (3%)
Frame = +1
Query: 238 QMNWIDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDYALR---ARVSNNGS 408
+ +W D RLS+ S + ER+WRPD N + + R+S +G
Sbjct: 90 RQSWRDSRLSFLGPIKSLSLSIKMLERIWRPDTYFYNGKHSYVHTITVPNKLLRISQDGD 149
Query: 409 VSXIKRLDISTPISMQLDNWPNDMQTCTFKFGS 507
+ RL I M+L N+P D Q+C GS
Sbjct: 150 ILYSMRLTIKAKCPMELRNFPMDRQSCPLILGS 182
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 43.2 bits (97), Expect = 3e-06
Identities = 33/132 (25%), Positives = 58/132 (43%), Gaps = 6/132 (4%)
Frame = +1
Query: 160 VVNLTLHLRH-ANIRESESTVRILADLQMNWIDKRLSWN--AGEWGCSTWLVSSERLWRP 330
+V + L +R A I + + + + W+D+RL +N G T L + R+W P
Sbjct: 60 IVRVNLFVRSIATISDIKMEYSVQLTFREQWLDERLRFNDFGGRLKYLT-LTDASRVWMP 118
Query: 331 DVVLLNAAATTAGDYALR---ARVSNNGSVSXIKRLDISTPISMQLDNWPNDMQTCTFKF 501
D+ N + + R+ NGSV R+ ++ M L +P D Q C+ +
Sbjct: 119 DLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIRISLTLSCPMNLKLYPLDRQVCSLRM 178
Query: 502 GSRMHNSDEMDF 537
S +D++ F
Sbjct: 179 ASYGWTTDDLVF 190
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 40.3 bits (90), Expect = 2e-05
Identities = 28/102 (27%), Positives = 46/102 (45%), Gaps = 5/102 (4%)
Frame = +1
Query: 247 WIDKRLSWN--AGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSV 411
W+D+RL +N G T L + R+W PD+ N + + R+ NGSV
Sbjct: 90 WLDERLRFNDFGGRLKYLT-LTDASRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSV 148
Query: 412 SXIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDF 537
R+ ++ M L +P D Q C+ + S +D++ F
Sbjct: 149 LYSIRISLTLSCPMNLKLYPLDRQVCSLRMASYGWTTDDLVF 190
>DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel
protein.
Length = 489
Score = 39.9 bits (89), Expect = 3e-05
Identities = 30/107 (28%), Positives = 45/107 (42%), Gaps = 3/107 (2%)
Frame = +1
Query: 196 IRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDY 375
I E I L W D+RL+++ E + +E++W PD N + D
Sbjct: 75 ISEVNMDYTITMYLNQYWKDERLAFSQEEEVLTLSGDFAEKIWVPDTFFANDKNSFLHDV 134
Query: 376 ALR---ARVSNNGSVSXIKRLDISTPISMQLDNWPNDMQTCTFKFGS 507
R R+S +GSV+ R + M L +P D Q CT + S
Sbjct: 135 TERNKLVRLSGDGSVTYGMRFTTTLACMMDLHYYPLDSQNCTVEIES 181
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 38.3 bits (85), Expect = 9e-05
Identities = 29/96 (30%), Positives = 44/96 (45%), Gaps = 9/96 (9%)
Frame = +1
Query: 247 WIDKRLSWNAGEWGCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSN 399
W D RL++ G T V SE +W PD +N ATT+ ++ R+ +
Sbjct: 67 WTDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHH 122
Query: 400 NGSVSXIKRLDISTPISMQLDNWPNDMQTCTFKFGS 507
+GS++ RL I+ M L +P D Q C + S
Sbjct: 123 SGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIES 158
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 38.3 bits (85), Expect = 9e-05
Identities = 29/96 (30%), Positives = 44/96 (45%), Gaps = 9/96 (9%)
Frame = +1
Query: 247 WIDKRLSWNAGEWGCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSN 399
W D RL++ G T V SE +W PD +N ATT+ ++ R+ +
Sbjct: 67 WTDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHH 122
Query: 400 NGSVSXIKRLDISTPISMQLDNWPNDMQTCTFKFGS 507
+GS++ RL I+ M L +P D Q C + S
Sbjct: 123 SGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIES 158
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 38.3 bits (85), Expect = 9e-05
Identities = 29/96 (30%), Positives = 44/96 (45%), Gaps = 9/96 (9%)
Frame = +1
Query: 247 WIDKRLSWNAGEWGCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSN 399
W D RL++ G T V SE +W PD +N ATT+ ++ R+ +
Sbjct: 6 WTDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHH 61
Query: 400 NGSVSXIKRLDISTPISMQLDNWPNDMQTCTFKFGS 507
+GS++ RL I+ M L +P D Q C + S
Sbjct: 62 SGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIES 97
>DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chloride
channel protein.
Length = 383
Score = 34.7 bits (76), Expect = 0.001
Identities = 26/118 (22%), Positives = 54/118 (45%), Gaps = 7/118 (5%)
Frame = +1
Query: 205 SESTVRILAD--LQMNWIDKRLSW--NAGEWGCSTWLVSSERLWRPDVVLLNAAATTAGD 372
+E ++ +AD L +W D RL N E + +WRPD NA T +
Sbjct: 45 NEESMTYVADIFLAQSWRDSRLRLPENMSEDYRILDVDWLHNIWRPDCFFKNAKKVTFHE 104
Query: 373 YALRAR---VSNNGSVSXIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDF 537
++ + ++ ++ + +L + +M+ +++P+D Q C+ S H + ++ F
Sbjct: 105 MSIPNHYLWLYHDKTLLYMSKLTLVLSCAMKFESYPHDTQICSMMIESLSHTTQDLVF 162
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 34.7 bits (76), Expect = 0.001
Identities = 19/79 (24%), Positives = 36/79 (45%), Gaps = 3/79 (3%)
Frame = +1
Query: 313 ERLWRPDVVLLNAAATTAGDYALRAR---VSNNGSVSXIKRLDISTPISMQLDNWPNDMQ 483
+ +WRPD NA + T + + + ++ + +L + +M +P+D Q
Sbjct: 116 KNMWRPDSFFKNAKSVTFQTMTIPNHYLWLYKDKTILYMVKLTLKLSCAMNFLIYPHDTQ 175
Query: 484 TCTFKFGSRMHNSDEMDFR 540
C + S H +DEM F+
Sbjct: 176 ECKLQMESLSHTTDEMIFQ 194
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 32.3 bits (70), Expect = 0.006
Identities = 33/138 (23%), Positives = 57/138 (41%), Gaps = 4/138 (2%)
Frame = +1
Query: 106 STRSSQRTIGSLPPYSKIVVNLT-LHLRHANIRESESTVRILADLQMNWIDKRLSW-NAG 279
STR +R + P + VN++ L L A+ ES + LQ W D RL + N
Sbjct: 71 STRYDKRLLP--PVQGTLTVNVSVLLLSLASPDESSLKYEVEFLLQQQWYDPRLRYSNRS 128
Query: 280 EWGCSTWLVSSERLWRPDV--VLLNAAATTAGDYALRARVSNNGSVSXIKRLDISTPISM 453
++ + + +W PD ++ R+ NG+V+ + R +
Sbjct: 129 QYEFLNAIHHYDDIWLPDTYFIMHGDFKDPLIPVHFALRIYRNGTVNYLMRRHLILSCQG 188
Query: 454 QLDNWPNDMQTCTFKFGS 507
+L+ +P D C+F S
Sbjct: 189 RLNIFPFDDPLCSFAIES 206
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 32.3 bits (70), Expect = 0.006
Identities = 33/138 (23%), Positives = 57/138 (41%), Gaps = 4/138 (2%)
Frame = +1
Query: 106 STRSSQRTIGSLPPYSKIVVNLT-LHLRHANIRESESTVRILADLQMNWIDKRLSW-NAG 279
STR +R + P + VN++ L L A+ ES + LQ W D RL + N
Sbjct: 71 STRYDKRLLP--PVQGTLTVNVSVLLLSLASPDESSLKYEVEFLLQQQWYDPRLRYSNRS 128
Query: 280 EWGCSTWLVSSERLWRPDV--VLLNAAATTAGDYALRARVSNNGSVSXIKRLDISTPISM 453
++ + + +W PD ++ R+ NG+V+ + R +
Sbjct: 129 QYEFLNAIHHYDDIWLPDTYFIMHGDFKDPLIPVHFALRIYRNGTVNYLMRRHLILSCQG 188
Query: 454 QLDNWPNDMQTCTFKFGS 507
+L+ +P D C+F S
Sbjct: 189 RLNIFPFDDPLCSFAIES 206
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 32.3 bits (70), Expect = 0.006
Identities = 33/138 (23%), Positives = 57/138 (41%), Gaps = 4/138 (2%)
Frame = +1
Query: 106 STRSSQRTIGSLPPYSKIVVNLT-LHLRHANIRESESTVRILADLQMNWIDKRLSW-NAG 279
STR +R + P + VN++ L L A+ ES + LQ W D RL + N
Sbjct: 71 STRYDKRLLP--PVQGTLTVNVSVLLLSLASPDESSLKYEVEFLLQQQWYDPRLRYSNRS 128
Query: 280 EWGCSTWLVSSERLWRPDV--VLLNAAATTAGDYALRARVSNNGSVSXIKRLDISTPISM 453
++ + + +W PD ++ R+ NG+V+ + R +
Sbjct: 129 QYEFLNAIHHYDDIWLPDTYFIMHGDFKDPLIPVHFALRIYRNGTVNYLMRRHLILSCQG 188
Query: 454 QLDNWPNDMQTCTFKFGS 507
+L+ +P D C+F S
Sbjct: 189 RLNIFPFDDPLCSFAIES 206
>DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 469
Score = 31.5 bits (68), Expect = 0.010
Identities = 20/74 (27%), Positives = 35/74 (47%), Gaps = 3/74 (4%)
Frame = +1
Query: 319 LWRPDVVLLN--AAATTAGDYA-LRARVSNNGSVSXIKRLDISTPISMQLDNWPNDMQTC 489
+W P V + N ++A T + + + +G V RL + ++L+ +P D+Q C
Sbjct: 97 IWTPTVYVSNEPSSAITGNNVKDVLVSIDPSGMVRLNTRLQATLNCGLRLEKFPFDVQEC 156
Query: 490 TFKFGSRMHNSDEM 531
F S HN +M
Sbjct: 157 PLIFESWTHNVLDM 170
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 29.5 bits (63), Expect = 0.040
Identities = 28/121 (23%), Positives = 50/121 (41%), Gaps = 4/121 (3%)
Frame = +1
Query: 157 IVVNLT-LHLRHANIRESESTVRILADLQMNWIDKRLSW-NAGEWGCSTWLVSSERLWRP 330
+ VN++ L L A+ ES + LQ W D RL + N ++ + + +W P
Sbjct: 137 LTVNVSVLLLSLASPDESSLKYEVEFLLQQQWYDPRLRYSNRSQYEFLNAIHHYDDIWLP 196
Query: 331 DV--VLLNAAATTAGDYALRARVSNNGSVSXIKRLDISTPISMQLDNWPNDMQTCTFKFG 504
D ++ R+ NG+V+ + R + +L+ +P D C+F
Sbjct: 197 DTYFIMHGDFKDPLIPVHFALRIYRNGTVNYLMRRHLILSCQGRLNIFPFDDPLCSFAIE 256
Query: 505 S 507
S
Sbjct: 257 S 257
>DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 391
Score = 28.3 bits (60), Expect = 0.093
Identities = 29/139 (20%), Positives = 57/139 (41%), Gaps = 11/139 (7%)
Frame = +1
Query: 157 IVVNLTLHLRHAN-IRESESTVRILADLQMNWIDKRLS-----WNAGEWGCSTWLVSSER 318
++V+ + + N I + R+ ++ +WI+ RL + G+ + +
Sbjct: 11 VLVDFNIFVADINSINVEDMDFRVDMFVRQSWIESRLDMPDYIFEEGDDYVTLPPEFFDS 70
Query: 319 LWRPDVVLLNAAATTAGDYALRARVSN-----NGSVSXIKRLDISTPISMQLDNWPNDMQ 483
LW+PD LNA + AL + S+ N +V R+ M+ +P D+Q
Sbjct: 71 LWQPDPYFLNAKVSEIA--ALNHKFSSVTLYRNKTVKYSARMHAIIACQMEFQLYPMDIQ 128
Query: 484 TCTFKFGSRMHNSDEMDFR 540
C S ++ ++ R
Sbjct: 129 ICPIYIESFSYHKQKLRLR 147
>AF134816-1|AAD40232.1| 50|Apis mellifera unknown protein.
Length = 50
Score = 22.2 bits (45), Expect = 6.1
Identities = 8/19 (42%), Positives = 13/19 (68%)
Frame = -1
Query: 673 PEKHXGTIPTAXFHLATVL 617
P+ H G+I + +HL TV+
Sbjct: 31 PKDHNGSIYWSMYHLCTVV 49
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 21.8 bits (44), Expect = 8.1
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = -2
Query: 300 PSAAAPFPCVPTQS 259
PSA AP P +P S
Sbjct: 411 PSAGAPMPPIPNMS 424
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 209,620
Number of Sequences: 438
Number of extensions: 4632
Number of successful extensions: 87
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 47
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 50
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26945694
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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