Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP11_FL5_D08
(809 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L10911-1|AAA16347.1| 530|Homo sapiens splicing factor protein. 37 0.099
L10910-1|AAA16346.1| 524|Homo sapiens splicing factor protein. 37 0.099
BC141835-1|AAI41836.1| 530|Homo sapiens RNA binding motif prote... 37 0.099
BC131543-1|AAI31544.1| 508|Homo sapiens RBM39 protein protein. 37 0.099
AL357374-12|CAI13607.1| 193|Homo sapiens RNA binding motif prot... 37 0.099
AL357374-11|CAI13608.1| 202|Homo sapiens RNA binding motif prot... 37 0.099
AL357374-10|CAI13606.1| 231|Homo sapiens RNA binding motif prot... 37 0.099
AL357374-9|CAC11119.1| 524|Homo sapiens RNA binding motif prote... 37 0.099
AL357374-8|CAC11118.1| 530|Homo sapiens RNA binding motif prote... 37 0.099
X59303-1|CAA41990.1| 1265|Homo sapiens valyl-tRNA synthetase pro... 31 4.9
M98326-1|AAA81332.1| 1063|Homo sapiens valyl-tRNA synthetase pro... 31 4.9
BX248133-11|CAM26113.1| 1182|Homo sapiens valyl-tRNA synthetase ... 31 4.9
BC012808-1|AAH12808.1| 1264|Homo sapiens valyl-tRNA synthetase p... 31 4.9
BA000025-12|BAB63303.1| 1264|Homo sapiens valyl tRNA synthetase ... 31 4.9
AL671762-1|CAI18211.1| 1264|Homo sapiens valyl-tRNA synthetase p... 31 4.9
AL662899-2|CAI18384.1| 1264|Homo sapiens valyl-tRNA synthetase p... 31 4.9
AL662834-12|CAI17732.1| 1264|Homo sapiens valyl-tRNA synthetase ... 31 4.9
AF134726-10|AAD21819.1| 1264|Homo sapiens G7A protein. 31 4.9
CR541832-1|CAG46631.1| 273|Homo sapiens HLA-DOB protein. 31 6.5
CR541811-1|CAG46610.1| 273|Homo sapiens HLA-DOB protein. 31 6.5
BC112201-1|AAI12202.1| 1849|Homo sapiens BTAF1 RNA polymerase II... 30 8.6
AL365398-1|CAI14103.1| 1849|Homo sapiens BTAF1 RNA polymerase II... 30 8.6
AL359198-2|CAH73478.1| 1849|Homo sapiens BTAF1 RNA polymerase II... 30 8.6
AJ001017-1|CAA04475.1| 1849|Homo sapiens TBP associated factor p... 30 8.6
AF038362-1|AAC04573.1| 1849|Homo sapiens TBP-associated factor 1... 30 8.6
>L10911-1|AAA16347.1| 530|Homo sapiens splicing factor protein.
Length = 530
Score = 36.7 bits (81), Expect = 0.099
Identities = 20/57 (35%), Positives = 33/57 (57%)
Frame = +3
Query: 87 NKKISRAHTA*QSAHRR*MRNGKRQREQCCSRERKRSGRLYTNKKQTG*RETRFRGK 257
+K SR+H +S + R+ R+R++ SRERKRS + ++ R+ RFRG+
Sbjct: 38 SKSRSRSHERKRSKSKERKRSRDRERKKSKSRERKRSRSKERRRSRSRSRDRRFRGR 94
>L10910-1|AAA16346.1| 524|Homo sapiens splicing factor protein.
Length = 524
Score = 36.7 bits (81), Expect = 0.099
Identities = 20/57 (35%), Positives = 33/57 (57%)
Frame = +3
Query: 87 NKKISRAHTA*QSAHRR*MRNGKRQREQCCSRERKRSGRLYTNKKQTG*RETRFRGK 257
+K SR+H +S + R+ R+R++ SRERKRS + ++ R+ RFRG+
Sbjct: 38 SKSRSRSHERKRSKSKERKRSRDRERKKSKSRERKRSRSKERRRSRSRSRDRRFRGR 94
>BC141835-1|AAI41836.1| 530|Homo sapiens RNA binding motif protein
39 protein.
Length = 530
Score = 36.7 bits (81), Expect = 0.099
Identities = 20/57 (35%), Positives = 33/57 (57%)
Frame = +3
Query: 87 NKKISRAHTA*QSAHRR*MRNGKRQREQCCSRERKRSGRLYTNKKQTG*RETRFRGK 257
+K SR+H +S + R+ R+R++ SRERKRS + ++ R+ RFRG+
Sbjct: 38 SKSRSRSHERKRSKSKERKRSRDRERKKSKSRERKRSRSKERRRSRSRSRDRRFRGR 94
>BC131543-1|AAI31544.1| 508|Homo sapiens RBM39 protein protein.
Length = 508
Score = 36.7 bits (81), Expect = 0.099
Identities = 20/57 (35%), Positives = 33/57 (57%)
Frame = +3
Query: 87 NKKISRAHTA*QSAHRR*MRNGKRQREQCCSRERKRSGRLYTNKKQTG*RETRFRGK 257
+K SR+H +S + R+ R+R++ SRERKRS + ++ R+ RFRG+
Sbjct: 38 SKSRSRSHERKRSKSKERKRSRDRERKKSKSRERKRSRSKERRRSRSRSRDRRFRGR 94
>AL357374-12|CAI13607.1| 193|Homo sapiens RNA binding motif protein
39 protein.
Length = 193
Score = 36.7 bits (81), Expect = 0.099
Identities = 20/57 (35%), Positives = 33/57 (57%)
Frame = +3
Query: 87 NKKISRAHTA*QSAHRR*MRNGKRQREQCCSRERKRSGRLYTNKKQTG*RETRFRGK 257
+K SR+H +S + R+ R+R++ SRERKRS + ++ R+ RFRG+
Sbjct: 38 SKSRSRSHERKRSKSKERKRSRDRERKKSKSRERKRSRSKERRRSRSRSRDRRFRGR 94
>AL357374-11|CAI13608.1| 202|Homo sapiens RNA binding motif protein
39 protein.
Length = 202
Score = 36.7 bits (81), Expect = 0.099
Identities = 20/57 (35%), Positives = 33/57 (57%)
Frame = +3
Query: 87 NKKISRAHTA*QSAHRR*MRNGKRQREQCCSRERKRSGRLYTNKKQTG*RETRFRGK 257
+K SR+H +S + R+ R+R++ SRERKRS + ++ R+ RFRG+
Sbjct: 38 SKSRSRSHERKRSKSKERKRSRDRERKKSKSRERKRSRSKERRRSRSRSRDRRFRGR 94
>AL357374-10|CAI13606.1| 231|Homo sapiens RNA binding motif protein
39 protein.
Length = 231
Score = 36.7 bits (81), Expect = 0.099
Identities = 20/57 (35%), Positives = 33/57 (57%)
Frame = +3
Query: 87 NKKISRAHTA*QSAHRR*MRNGKRQREQCCSRERKRSGRLYTNKKQTG*RETRFRGK 257
+K SR+H +S + R+ R+R++ SRERKRS + ++ R+ RFRG+
Sbjct: 38 SKSRSRSHERKRSKSKERKRSRDRERKKSKSRERKRSRSKERRRSRSRSRDRRFRGR 94
>AL357374-9|CAC11119.1| 524|Homo sapiens RNA binding motif protein
39 protein.
Length = 524
Score = 36.7 bits (81), Expect = 0.099
Identities = 20/57 (35%), Positives = 33/57 (57%)
Frame = +3
Query: 87 NKKISRAHTA*QSAHRR*MRNGKRQREQCCSRERKRSGRLYTNKKQTG*RETRFRGK 257
+K SR+H +S + R+ R+R++ SRERKRS + ++ R+ RFRG+
Sbjct: 38 SKSRSRSHERKRSKSKERKRSRDRERKKSKSRERKRSRSKERRRSRSRSRDRRFRGR 94
>AL357374-8|CAC11118.1| 530|Homo sapiens RNA binding motif protein
39 protein.
Length = 530
Score = 36.7 bits (81), Expect = 0.099
Identities = 20/57 (35%), Positives = 33/57 (57%)
Frame = +3
Query: 87 NKKISRAHTA*QSAHRR*MRNGKRQREQCCSRERKRSGRLYTNKKQTG*RETRFRGK 257
+K SR+H +S + R+ R+R++ SRERKRS + ++ R+ RFRG+
Sbjct: 38 SKSRSRSHERKRSKSKERKRSRDRERKKSKSRERKRSRSKERRRSRSRSRDRRFRGR 94
>X59303-1|CAA41990.1| 1265|Homo sapiens valyl-tRNA synthetase protein.
Length = 1265
Score = 31.1 bits (67), Expect = 4.9
Identities = 19/52 (36%), Positives = 25/52 (48%)
Frame = -2
Query: 403 FVREETFPRDPFPWPSDCPLRTSRPYPRPNFCLYFRSI*APISLQLAIPFPR 248
FV EE F R P P P PYP P+ C + + A +L+LA+ R
Sbjct: 1067 FVTEELFQRLPRRMPQAPPSLCVTPYPEPSECSW-KDPEAEAALELALSITR 1117
>M98326-1|AAA81332.1| 1063|Homo sapiens valyl-tRNA synthetase protein.
Length = 1063
Score = 31.1 bits (67), Expect = 4.9
Identities = 19/52 (36%), Positives = 25/52 (48%)
Frame = -2
Query: 403 FVREETFPRDPFPWPSDCPLRTSRPYPRPNFCLYFRSI*APISLQLAIPFPR 248
FV EE F R P P P PYP P+ C + + A +L+LA+ R
Sbjct: 866 FVTEELFQRLPRRMPQAPPSLCVTPYPEPSECSW-KDPEAEAALELALSITR 916
>BX248133-11|CAM26113.1| 1182|Homo sapiens valyl-tRNA synthetase
protein.
Length = 1182
Score = 31.1 bits (67), Expect = 4.9
Identities = 19/52 (36%), Positives = 25/52 (48%)
Frame = -2
Query: 403 FVREETFPRDPFPWPSDCPLRTSRPYPRPNFCLYFRSI*APISLQLAIPFPR 248
FV EE F R P P P PYP P+ C + + A +L+LA+ R
Sbjct: 984 FVTEELFQRLPRRMPQAPPSLCVTPYPEPSECSW-KDPEAEAALELALSITR 1034
>BC012808-1|AAH12808.1| 1264|Homo sapiens valyl-tRNA synthetase
protein.
Length = 1264
Score = 31.1 bits (67), Expect = 4.9
Identities = 19/52 (36%), Positives = 25/52 (48%)
Frame = -2
Query: 403 FVREETFPRDPFPWPSDCPLRTSRPYPRPNFCLYFRSI*APISLQLAIPFPR 248
FV EE F R P P P PYP P+ C + + A +L+LA+ R
Sbjct: 1066 FVTEELFQRLPRRMPQAPPSLCVTPYPEPSECSW-KDPEAEAALELALSITR 1116
>BA000025-12|BAB63303.1| 1264|Homo sapiens valyl tRNA synthetase
protein.
Length = 1264
Score = 31.1 bits (67), Expect = 4.9
Identities = 19/52 (36%), Positives = 25/52 (48%)
Frame = -2
Query: 403 FVREETFPRDPFPWPSDCPLRTSRPYPRPNFCLYFRSI*APISLQLAIPFPR 248
FV EE F R P P P PYP P+ C + + A +L+LA+ R
Sbjct: 1066 FVTEELFQRLPRRMPQAPPSLCVTPYPEPSECSW-KDPEAEAALELALSITR 1116
>AL671762-1|CAI18211.1| 1264|Homo sapiens valyl-tRNA synthetase
protein.
Length = 1264
Score = 31.1 bits (67), Expect = 4.9
Identities = 19/52 (36%), Positives = 25/52 (48%)
Frame = -2
Query: 403 FVREETFPRDPFPWPSDCPLRTSRPYPRPNFCLYFRSI*APISLQLAIPFPR 248
FV EE F R P P P PYP P+ C + + A +L+LA+ R
Sbjct: 1066 FVTEELFQRLPRRMPQAPPSLCVTPYPEPSECSW-KDPEAEAALELALSITR 1116
>AL662899-2|CAI18384.1| 1264|Homo sapiens valyl-tRNA synthetase
protein.
Length = 1264
Score = 31.1 bits (67), Expect = 4.9
Identities = 19/52 (36%), Positives = 25/52 (48%)
Frame = -2
Query: 403 FVREETFPRDPFPWPSDCPLRTSRPYPRPNFCLYFRSI*APISLQLAIPFPR 248
FV EE F R P P P PYP P+ C + + A +L+LA+ R
Sbjct: 1066 FVTEELFQRLPRRMPQAPPSLCVTPYPEPSECSW-KDPEAEAALELALSITR 1116
>AL662834-12|CAI17732.1| 1264|Homo sapiens valyl-tRNA synthetase
protein.
Length = 1264
Score = 31.1 bits (67), Expect = 4.9
Identities = 19/52 (36%), Positives = 25/52 (48%)
Frame = -2
Query: 403 FVREETFPRDPFPWPSDCPLRTSRPYPRPNFCLYFRSI*APISLQLAIPFPR 248
FV EE F R P P P PYP P+ C + + A +L+LA+ R
Sbjct: 1066 FVTEELFQRLPRRMPQAPPSLCVTPYPEPSECSW-KDPEAEAALELALSITR 1116
>AF134726-10|AAD21819.1| 1264|Homo sapiens G7A protein.
Length = 1264
Score = 31.1 bits (67), Expect = 4.9
Identities = 19/52 (36%), Positives = 25/52 (48%)
Frame = -2
Query: 403 FVREETFPRDPFPWPSDCPLRTSRPYPRPNFCLYFRSI*APISLQLAIPFPR 248
FV EE F R P P P PYP P+ C + + A +L+LA+ R
Sbjct: 1066 FVTEELFQRLPRRMPQAPPSLCVTPYPEPSECSW-KDPEAEAALELALSITR 1116
>CR541832-1|CAG46631.1| 273|Homo sapiens HLA-DOB protein.
Length = 273
Score = 30.7 bits (66), Expect = 6.5
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = -3
Query: 303 ISVQFRRQSLYNWRSPFPGTGSLVSRFVFCLYTIV 199
ISV++R QS Y+WR G + + +F L IV
Sbjct: 210 ISVEWRAQSEYSWRKMLSGIAAFLLGLIFLLVGIV 244
>CR541811-1|CAG46610.1| 273|Homo sapiens HLA-DOB protein.
Length = 273
Score = 30.7 bits (66), Expect = 6.5
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = -3
Query: 303 ISVQFRRQSLYNWRSPFPGTGSLVSRFVFCLYTIV 199
ISV++R QS Y+WR G + + +F L IV
Sbjct: 210 ISVEWRAQSEYSWRKMLSGIAAFLLGLIFLLVGIV 244
>BC112201-1|AAI12202.1| 1849|Homo sapiens BTAF1 RNA polymerase II,
B-TFIID transcription factor-associated, 170kDa protein.
Length = 1849
Score = 30.3 bits (65), Expect = 8.6
Identities = 21/46 (45%), Positives = 26/46 (56%), Gaps = 4/46 (8%)
Frame = +1
Query: 313 SSVLGKA-AMFEAGSPKAKEKDPAEMSLRERKALFEK---NKGAAI 438
+S+LG A A FE K+ E DP E R+RK L +K N G AI
Sbjct: 116 ASLLGSAGAEFEVQDEKSGEVDPKERIARQRKLLQKKLGLNMGEAI 161
>AL365398-1|CAI14103.1| 1849|Homo sapiens BTAF1 RNA polymerase II,
B-TFIID transcription factor-associated, 170kDa (Mot1
protein.
Length = 1849
Score = 30.3 bits (65), Expect = 8.6
Identities = 21/46 (45%), Positives = 26/46 (56%), Gaps = 4/46 (8%)
Frame = +1
Query: 313 SSVLGKA-AMFEAGSPKAKEKDPAEMSLRERKALFEK---NKGAAI 438
+S+LG A A FE K+ E DP E R+RK L +K N G AI
Sbjct: 116 ASLLGSAGAEFEVQDEKSGEVDPKERIARQRKLLQKKLGLNMGEAI 161
>AL359198-2|CAH73478.1| 1849|Homo sapiens BTAF1 RNA polymerase II,
B-TFIID transcription factor-associated, 170kDa (Mot1
protein.
Length = 1849
Score = 30.3 bits (65), Expect = 8.6
Identities = 21/46 (45%), Positives = 26/46 (56%), Gaps = 4/46 (8%)
Frame = +1
Query: 313 SSVLGKA-AMFEAGSPKAKEKDPAEMSLRERKALFEK---NKGAAI 438
+S+LG A A FE K+ E DP E R+RK L +K N G AI
Sbjct: 116 ASLLGSAGAEFEVQDEKSGEVDPKERIARQRKLLQKKLGLNMGEAI 161
>AJ001017-1|CAA04475.1| 1849|Homo sapiens TBP associated factor
protein.
Length = 1849
Score = 30.3 bits (65), Expect = 8.6
Identities = 21/46 (45%), Positives = 26/46 (56%), Gaps = 4/46 (8%)
Frame = +1
Query: 313 SSVLGKA-AMFEAGSPKAKEKDPAEMSLRERKALFEK---NKGAAI 438
+S+LG A A FE K+ E DP E R+RK L +K N G AI
Sbjct: 116 ASLLGSAGAEFEVQDEKSGEVDPKERIARQRKLLQKKLGLNMGEAI 161
>AF038362-1|AAC04573.1| 1849|Homo sapiens TBP-associated factor 172
protein.
Length = 1849
Score = 30.3 bits (65), Expect = 8.6
Identities = 21/46 (45%), Positives = 26/46 (56%), Gaps = 4/46 (8%)
Frame = +1
Query: 313 SSVLGKA-AMFEAGSPKAKEKDPAEMSLRERKALFEK---NKGAAI 438
+S+LG A A FE K+ E DP E R+RK L +K N G AI
Sbjct: 116 ASLLGSAGAEFEVQDEKSGEVDPKERIARQRKLLQKKLGLNMGEAI 161
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 98,999,548
Number of Sequences: 237096
Number of extensions: 1997729
Number of successful extensions: 5103
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 4873
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5089
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10036353240
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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