BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP11_FL5_D08
(809 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE013599-457|AAM71099.1| 1212|Drosophila melanogaster CG2092-PA,... 52 1e-06
X89858-1|CAA61954.1| 1201|Drosophila melanogaster actin binding ... 51 2e-06
AY069520-1|AAL39665.1| 1239|Drosophila melanogaster LD23793p pro... 48 1e-05
AY069223-1|AAL39368.1| 616|Drosophila melanogaster GH27072p pro... 48 1e-05
AE013599-458|AAM71100.1| 616|Drosophila melanogaster CG2092-PC,... 48 1e-05
AE013599-456|AAF59225.3| 1239|Drosophila melanogaster CG2092-PB,... 48 1e-05
AY070561-1|AAL48032.1| 538|Drosophila melanogaster LD37523p pro... 36 0.066
AE014297-149|AAF52095.1| 538|Drosophila melanogaster CG2503-PA ... 36 0.066
AY321364-1|AAP84718.1| 3241|Drosophila melanogaster PHD zinc fin... 31 1.9
AE014296-31|AAS64921.1| 3241|Drosophila melanogaster CG7036-PB, ... 31 1.9
AE014296-30|AAF47343.1| 3201|Drosophila melanogaster CG7036-PA, ... 31 1.9
AF289493-1|AAG40806.1| 785|Drosophila melanogaster aspartyl bet... 31 2.5
AE014134-2278|AAF53242.2| 1263|Drosophila melanogaster CG5122-PA... 31 2.5
AE013599-2182|AAM70947.1| 785|Drosophila melanogaster CG8421-PA... 31 2.5
AY069568-1|AAL39713.1| 513|Drosophila melanogaster LD29830p pro... 30 3.3
AY069525-1|AAL39670.1| 1150|Drosophila melanogaster LD24034p pro... 30 3.3
AF289494-1|AAG40807.1| 382|Drosophila melanogaster aspartyl bet... 30 3.3
AF055719-1|AAC32822.3| 513|Drosophila melanogaster splicing fac... 30 3.3
AE014296-221|AAF47472.1| 1150|Drosophila melanogaster CG2469-PB,... 30 3.3
AE014296-220|AAN11469.1| 1150|Drosophila melanogaster CG2469-PA,... 30 3.3
AE014134-1720|AAF52825.1| 513|Drosophila melanogaster CG4602-PA... 30 3.3
AE013599-2183|AAF58063.2| 382|Drosophila melanogaster CG8421-PB... 30 3.3
U72492-1|AAB92662.1| 675|Drosophila melanogaster fruitless clas... 30 4.3
D84437-1|BAA12663.1| 855|Drosophila melanogaster fruitless prot... 30 4.3
BT024450-1|ABC86512.1| 960|Drosophila melanogaster GH19932p pro... 30 4.3
AF220177-1|AAG28588.1| 956|Drosophila melanogaster fruitless ty... 30 4.3
AF220176-1|AAG28587.1| 855|Drosophila melanogaster fruitless ty... 30 4.3
AF039231-1|AAB96677.1| 776|Drosophila melanogaster fruitless cl... 30 4.3
AE014297-2540|AAN13777.1| 665|Drosophila melanogaster CG14307-P... 30 4.3
AE014297-2539|AAF55564.2| 516|Drosophila melanogaster CG14307-P... 30 4.3
AE014297-2538|AAS65176.1| 854|Drosophila melanogaster CG14307-P... 30 4.3
AE014297-2537|AAS65175.1| 854|Drosophila melanogaster CG14307-P... 30 4.3
AE014297-2536|AAF55565.2| 854|Drosophila melanogaster CG14307-P... 30 4.3
AE014297-2535|AAS65174.1| 906|Drosophila melanogaster CG14307-P... 30 4.3
AE014297-2534|AAS65173.1| 870|Drosophila melanogaster CG14307-P... 30 4.3
AE014297-2533|AAN13776.1| 955|Drosophila melanogaster CG14307-P... 30 4.3
AE014297-2532|AAN13775.1| 695|Drosophila melanogaster CG14307-P... 30 4.3
AE014297-2531|AAS65172.1| 705|Drosophila melanogaster CG14307-P... 30 4.3
AE014297-2530|AAF55563.2| 796|Drosophila melanogaster CG14307-P... 30 4.3
AE014297-2529|AAN13774.1| 688|Drosophila melanogaster CG14307-P... 30 4.3
AE014297-2528|AAF55562.2| 789|Drosophila melanogaster CG14307-P... 30 4.3
Y17920-1|CAA76940.1| 4116|Drosophila melanogaster CALO protein p... 29 5.7
AF096897-1|AAD20450.1| 5322|Drosophila melanogaster pushover pro... 29 5.7
AF096896-1|AAD20449.1| 4120|Drosophila melanogaster pushover pro... 29 5.7
AE014134-1390|AAF52598.1| 5322|Drosophila melanogaster CG14472-P... 29 5.7
AY118712-1|AAM50572.1| 1266|Drosophila melanogaster AT25667p pro... 29 9.9
>AE013599-457|AAM71099.1| 1212|Drosophila melanogaster CG2092-PA,
isoform A protein.
Length = 1212
Score = 51.6 bits (118), Expect = 1e-06
Identities = 43/150 (28%), Positives = 67/150 (44%), Gaps = 13/150 (8%)
Frame = +1
Query: 61 KPTVSKKPSIKKYHAPTPPDKVLTDDECEMEKDKXXXXXXXXXXXX-DDCIQTKNKPADE 237
KP +S + + +K AP PP K D+ ++ K +D + T P +
Sbjct: 235 KPHLSSRRA-EKGPAPLPPKKDEVDEASRTKQLKWDPKEEAAPASKVEDAVLTAKPPVPQ 293
Query: 238 RPGSGER------GSPIVKRLAPKLNGNIDRSSVLGKAAMFE----AGSPKA--KEKDPA 381
+ + + S + AP ++ V G+AA+FE G + +KDP
Sbjct: 294 KSTTVSQVAKNFASSAPAPKPAPAPAVSVKSGLVSGRAALFENKGTGGQSQGLRNQKDPC 353
Query: 382 EMSLRERKALFEKNKGAAIIPKAPFGLAPS 471
E+SL+ER LFE A++P AP G APS
Sbjct: 354 ELSLKERMKLFETGNNKAMLPMAPIGSAPS 383
>X89858-1|CAA61954.1| 1201|Drosophila melanogaster actin binding
protein protein.
Length = 1201
Score = 50.8 bits (116), Expect = 2e-06
Identities = 43/150 (28%), Positives = 67/150 (44%), Gaps = 13/150 (8%)
Frame = +1
Query: 61 KPTVSKKPSIKKYHAPTPPDKVLTDDECEMEKDKXXXXXXXXXXXX-DDCIQTKNKPADE 237
KP +S + + +K AP PP K D+ ++ K +D + T P +
Sbjct: 224 KPHLSSRRA-EKGPAPLPPKKDEVDEASRTKQLKWDPKEEAAPASKVEDAVLTAKPPVPQ 282
Query: 238 RPGSGER------GSPIVKRLAPKLNGNIDRSSVLGKAAMFE----AGSPKA--KEKDPA 381
+ + + S + AP ++ V G+AA+FE G + +KDP
Sbjct: 283 KSTTVSQVAKNFASSAPAPKPAPAPAVSVKSGLVSGRAALFENKGTGGQSQGLRNQKDPC 342
Query: 382 EMSLRERKALFEKNKGAAIIPKAPFGLAPS 471
E+SL+ER LFE A++P AP G APS
Sbjct: 343 ELSLKERMKLFETANNKAMLPMAPIGSAPS 372
>AY069520-1|AAL39665.1| 1239|Drosophila melanogaster LD23793p
protein.
Length = 1239
Score = 48.4 bits (110), Expect = 1e-05
Identities = 28/69 (40%), Positives = 38/69 (55%), Gaps = 6/69 (8%)
Frame = +1
Query: 283 APKLNGNIDRSSVLGKAAMFE----AGSPKA--KEKDPAEMSLRERKALFEKNKGAAIIP 444
AP ++ V G+AA+FE G + +KDP E+SL+ER LFE A++P
Sbjct: 342 APAPAVSVKSGLVSGRAALFENKGTGGQSQGLRNQKDPCELSLKERMKLFETGNNKAMLP 401
Query: 445 KAPFGLAPS 471
AP G APS
Sbjct: 402 MAPIGSAPS 410
>AY069223-1|AAL39368.1| 616|Drosophila melanogaster GH27072p
protein.
Length = 616
Score = 48.4 bits (110), Expect = 1e-05
Identities = 28/69 (40%), Positives = 38/69 (55%), Gaps = 6/69 (8%)
Frame = +1
Query: 283 APKLNGNIDRSSVLGKAAMFE----AGSPKA--KEKDPAEMSLRERKALFEKNKGAAIIP 444
AP ++ V G+AA+FE G + +KDP E+SL+ER LFE A++P
Sbjct: 342 APAPAVSVKSGLVSGRAALFENKGTGGQSQGLRNQKDPCELSLKERMKLFETGNNKAMLP 401
Query: 445 KAPFGLAPS 471
AP G APS
Sbjct: 402 MAPIGSAPS 410
>AE013599-458|AAM71100.1| 616|Drosophila melanogaster CG2092-PC,
isoform C protein.
Length = 616
Score = 48.4 bits (110), Expect = 1e-05
Identities = 28/69 (40%), Positives = 38/69 (55%), Gaps = 6/69 (8%)
Frame = +1
Query: 283 APKLNGNIDRSSVLGKAAMFE----AGSPKA--KEKDPAEMSLRERKALFEKNKGAAIIP 444
AP ++ V G+AA+FE G + +KDP E+SL+ER LFE A++P
Sbjct: 342 APAPAVSVKSGLVSGRAALFENKGTGGQSQGLRNQKDPCELSLKERMKLFETGNNKAMLP 401
Query: 445 KAPFGLAPS 471
AP G APS
Sbjct: 402 MAPIGSAPS 410
>AE013599-456|AAF59225.3| 1239|Drosophila melanogaster CG2092-PB,
isoform B protein.
Length = 1239
Score = 48.4 bits (110), Expect = 1e-05
Identities = 28/69 (40%), Positives = 38/69 (55%), Gaps = 6/69 (8%)
Frame = +1
Query: 283 APKLNGNIDRSSVLGKAAMFE----AGSPKA--KEKDPAEMSLRERKALFEKNKGAAIIP 444
AP ++ V G+AA+FE G + +KDP E+SL+ER LFE A++P
Sbjct: 342 APAPAVSVKSGLVSGRAALFENKGTGGQSQGLRNQKDPCELSLKERMKLFETGNNKAMLP 401
Query: 445 KAPFGLAPS 471
AP G APS
Sbjct: 402 MAPIGSAPS 410
>AY070561-1|AAL48032.1| 538|Drosophila melanogaster LD37523p
protein.
Length = 538
Score = 35.9 bits (79), Expect = 0.066
Identities = 33/101 (32%), Positives = 43/101 (42%)
Frame = +3
Query: 342 RSGQSEGQGKGSRGNVSSRTKSVVREK*GRRNYTESTIRTSPFDENPSXXXXXXXSGQAY 521
RSG S G G GS SSR+KS R G R+ T S S + S S
Sbjct: 430 RSGSSSGSGSGSGSRASSRSKSGSRSGSGSRSRTNSP-AGSQKSGSRSRSVSRSRSRSKS 488
Query: 522 GSTNENNSDKANITKNSRSNSKDSLAEDNVSQSSLSGGIKG 644
GS + + S ++ SRS S+ + S+S SG G
Sbjct: 489 GSRSRSRS-RSKSGSRSRSGSRSGSGSRSPSRSR-SGSPSG 527
>AE014297-149|AAF52095.1| 538|Drosophila melanogaster CG2503-PA
protein.
Length = 538
Score = 35.9 bits (79), Expect = 0.066
Identities = 33/101 (32%), Positives = 43/101 (42%)
Frame = +3
Query: 342 RSGQSEGQGKGSRGNVSSRTKSVVREK*GRRNYTESTIRTSPFDENPSXXXXXXXSGQAY 521
RSG S G G GS SSR+KS R G R+ T S S + S S
Sbjct: 430 RSGSSSGSGSGSGSRASSRSKSGSRSGSGSRSRTNSP-AGSQKSGSRSRSVSRSRSRSKS 488
Query: 522 GSTNENNSDKANITKNSRSNSKDSLAEDNVSQSSLSGGIKG 644
GS + + S ++ SRS S+ + S+S SG G
Sbjct: 489 GSRSRSRS-RSKSGSRSRSGSRSGSGSRSPSRSR-SGSPSG 527
>AY321364-1|AAP84718.1| 3241|Drosophila melanogaster PHD zinc finger
protein rhinoceros protein.
Length = 3241
Score = 31.1 bits (67), Expect = 1.9
Identities = 23/85 (27%), Positives = 38/85 (44%)
Frame = +3
Query: 369 KGSRGNVSSRTKSVVREK*GRRNYTESTIRTSPFDENPSXXXXXXXSGQAYGSTNENNSD 548
K + G +SSRT S + G + T ++ SP +NP+ S A ST+ +
Sbjct: 763 KLNNGILSSRTSSPEKTVAGSKVGTTTSKVRSPPGKNPTGRRASKSSAAAATSTHNKSQF 822
Query: 549 KANITKNSRSNSKDSLAEDNVSQSS 623
+NI ++ S+S S S+
Sbjct: 823 HSNIRSSTTSHSSSGTISSGNSSSA 847
>AE014296-31|AAS64921.1| 3241|Drosophila melanogaster CG7036-PB,
isoform B protein.
Length = 3241
Score = 31.1 bits (67), Expect = 1.9
Identities = 23/85 (27%), Positives = 38/85 (44%)
Frame = +3
Query: 369 KGSRGNVSSRTKSVVREK*GRRNYTESTIRTSPFDENPSXXXXXXXSGQAYGSTNENNSD 548
K + G +SSRT S + G + T ++ SP +NP+ S A ST+ +
Sbjct: 763 KLNNGILSSRTSSPEKTVAGSKVGTTTSKVRSPPGKNPTGRRASKSSAAAATSTHNKSQF 822
Query: 549 KANITKNSRSNSKDSLAEDNVSQSS 623
+NI ++ S+S S S+
Sbjct: 823 HSNIRSSTTSHSSSGTISSGNSSSA 847
>AE014296-30|AAF47343.1| 3201|Drosophila melanogaster CG7036-PA,
isoform A protein.
Length = 3201
Score = 31.1 bits (67), Expect = 1.9
Identities = 23/85 (27%), Positives = 38/85 (44%)
Frame = +3
Query: 369 KGSRGNVSSRTKSVVREK*GRRNYTESTIRTSPFDENPSXXXXXXXSGQAYGSTNENNSD 548
K + G +SSRT S + G + T ++ SP +NP+ S A ST+ +
Sbjct: 723 KLNNGILSSRTSSPEKTVAGSKVGTTTSKVRSPPGKNPTGRRASKSSAAAATSTHNKSQF 782
Query: 549 KANITKNSRSNSKDSLAEDNVSQSS 623
+NI ++ S+S S S+
Sbjct: 783 HSNIRSSTTSHSSSGTISSGNSSSA 807
>AF289493-1|AAG40806.1| 785|Drosophila melanogaster aspartyl
beta-hydroxylase variant1 protein.
Length = 785
Score = 30.7 bits (66), Expect = 2.5
Identities = 31/127 (24%), Positives = 51/127 (40%), Gaps = 5/127 (3%)
Frame = +1
Query: 73 SKKPSIKKYHAPTPPDKVLTDDECEMEKDKXXXXXXXXXXXXDDCIQTKNKPADERPG-- 246
S +P +Y A + P K DD+ + ++DK Q +N P D P
Sbjct: 261 SVEPERSQYAAQSAPAKDNNDDDDDDDQDKNDADDGDDDEFESLAQQFENDPEDTVPAKA 320
Query: 247 --SGERGSPIVKRLAPKLNGNIDRSSVLGKAAMFEAGSPKAKEKDPAEMSLRE-RKALFE 417
S E+ PK G+ S + + EA A+++DP E LR+ + +
Sbjct: 321 VESEEQDQDQADEEEPKEEGS---SWLASQIKPKEAAPAPAEKEDPFEQELRKANEEMIR 377
Query: 418 KNKGAAI 438
+N A+
Sbjct: 378 ENYAQAL 384
>AE014134-2278|AAF53242.2| 1263|Drosophila melanogaster CG5122-PA
protein.
Length = 1263
Score = 30.7 bits (66), Expect = 2.5
Identities = 37/153 (24%), Positives = 58/153 (37%), Gaps = 12/153 (7%)
Frame = +1
Query: 61 KPTVSKKPSIKKYHAPTPPDKVLTDDECEMEK-DKXXXXXXXXXXXXDDCIQTKNKPADE 237
K S KP I A PP+K TD E K + C+ KN+
Sbjct: 293 KENASAKPKI----ASPPPNKAQTDKSPENPKVGFNMPSNSAFPLGRNPCVDGKNEKKVS 348
Query: 238 RPGSGERGSPIVKRLAPKLNGNID-----------RSSVLGKAAMFEAGSPKAKEKDPAE 384
+ G+ P K PK+ + +SV KAA +GSPK+ E +
Sbjct: 349 K-GAATDSKPQQKAKKPKVAAKSECKQEKKMASCPNASVSKKAATVPSGSPKSPESAAPK 407
Query: 385 MSLRERKALFEKNKGAAIIPKAPFGLAPSTKTL 483
R++K++ + + P P P++K +
Sbjct: 408 AEPRKKKSM----RQGVVNPSKPKSKKPASKAI 436
>AE013599-2182|AAM70947.1| 785|Drosophila melanogaster CG8421-PA,
isoform A protein.
Length = 785
Score = 30.7 bits (66), Expect = 2.5
Identities = 31/127 (24%), Positives = 51/127 (40%), Gaps = 5/127 (3%)
Frame = +1
Query: 73 SKKPSIKKYHAPTPPDKVLTDDECEMEKDKXXXXXXXXXXXXDDCIQTKNKPADERPG-- 246
S +P +Y A + P K DD+ + ++DK Q +N P D P
Sbjct: 261 SVEPERSQYAAQSAPAKDNNDDDDDDDQDKNDADDGDDDEFESLAQQFENDPEDTVPAKA 320
Query: 247 --SGERGSPIVKRLAPKLNGNIDRSSVLGKAAMFEAGSPKAKEKDPAEMSLRE-RKALFE 417
S E+ PK G+ S + + EA A+++DP E LR+ + +
Sbjct: 321 VESEEQDQDQADEEEPKEEGS---SWLASQIKPKEAAPAPAEKEDPFEQELRKANEEMIR 377
Query: 418 KNKGAAI 438
+N A+
Sbjct: 378 ENYAQAL 384
>AY069568-1|AAL39713.1| 513|Drosophila melanogaster LD29830p
protein.
Length = 513
Score = 30.3 bits (65), Expect = 3.3
Identities = 31/130 (23%), Positives = 55/130 (42%), Gaps = 8/130 (6%)
Frame = +3
Query: 87 NKKISRAHTA*QSAHRR*MRNGKRQREQCCSRERKRSGRLYTNKKQTG*RETRFRGKGIA 266
+++ SR+ + ++ RR R+G R+R R RS ++++ ++ +R R
Sbjct: 295 DRRTSRSRSHRSTSRRRSRRSGSRERRSVSRSRRSRSRGKHSSRSRSKRSRSRHRRSSSR 354
Query: 267 N--CKEIGA*IERKYRQKFGLG*GRD------VRSGQSEGQGKGSRGNVSSRTKSVVREK 422
+ + G R R + R RS +S G G G GN R++S R K
Sbjct: 355 SRRSRSRGGKHSRSSRSRGKRSRSRHRRSTSRSRSSRSHGTGGGGSGN-GKRSRSRERSK 413
Query: 423 *GRRNYTEST 452
R+ S+
Sbjct: 414 KSHRSEKHSS 423
>AY069525-1|AAL39670.1| 1150|Drosophila melanogaster LD24034p protein.
Length = 1150
Score = 30.3 bits (65), Expect = 3.3
Identities = 36/149 (24%), Positives = 61/149 (40%), Gaps = 1/149 (0%)
Frame = +3
Query: 147 NGKRQREQCCSRERKRSGRLYTNKKQTG*RETRFRGKGIANCKEIGA*IERKYRQKFGLG 326
+GKR + + SR R RSG + ++G R + + G+ + K
Sbjct: 1006 DGKRSKSRSRSRSRNRSGSRSGSASRSGSDREASRKRSRSRSGS-GSGSDSDEATKRKRA 1064
Query: 327 *GRDVRSGQSEGQGKGSRGNVSSRTKSVVREK*GRRNYTESTIRTSPFDENPSXXXXXXX 506
R G+S+ G +R SSR++S R K G R+ + S ++ + S
Sbjct: 1065 RNRIESGGESDRSGSRARSKSSSRSRS--RSKSGSRSRSRS--KSGSRSRSRSKSGSRSR 1120
Query: 507 SGQAYGSTNENNS-DKANITKNSRSNSKD 590
S GS + + S ++ SRS S +
Sbjct: 1121 SRSPSGSRSRSRSGSRSKSESRSRSGSPE 1149
>AF289494-1|AAG40807.1| 382|Drosophila melanogaster aspartyl
beta-hydroxylase variant2 protein.
Length = 382
Score = 30.3 bits (65), Expect = 3.3
Identities = 29/113 (25%), Positives = 45/113 (39%), Gaps = 4/113 (3%)
Frame = +1
Query: 73 SKKPSIKKYHAPTPPDKVLTDDECEMEKDKXXXXXXXXXXXXDDCIQTKNKPADERPG-- 246
S +P +Y A + P K DD+ + ++DK Q +N P D P
Sbjct: 261 SVEPERSQYAAQSAPAKDNNDDDDDDDQDKNDADDGDDDEFESLAQQFENDPEDTVPAKA 320
Query: 247 --SGERGSPIVKRLAPKLNGNIDRSSVLGKAAMFEAGSPKAKEKDPAEMSLRE 399
S E+ PK G+ S + + EA A+++DP E LR+
Sbjct: 321 VESEEQDQDQADEEEPKEEGS---SWLASQIKPKEAAPAPAEKEDPFEQELRK 370
>AF055719-1|AAC32822.3| 513|Drosophila melanogaster splicing factor
SRp54 protein.
Length = 513
Score = 30.3 bits (65), Expect = 3.3
Identities = 44/195 (22%), Positives = 80/195 (41%), Gaps = 14/195 (7%)
Frame = +3
Query: 87 NKKISRAHTA*QSAHRR*MRNGKRQREQCC-SR---------ERKRSGRLYTNKKQTG*R 236
+++ SR+ + ++ RR R+G R+R SR R RS R + +++ R
Sbjct: 295 DRRTSRSRSHRSTSRRRSRRSGSRERRSVSRSRRSRSRGKHSSRSRSKRSRSRHRRSSSR 354
Query: 237 ETRFRGKGIANCKEIGA*IER-KYRQKFGLG*GRDVRSGQS--EGQGKGSRGNVSSRTKS 407
R R +G + + + +R + R + R RS + G G G R RTK
Sbjct: 355 SRRSRSRGGKHSRSSRSRGKRSRSRHRRSTSRSRSSRSHGTGGGGSGNGKRSRSRERTKK 414
Query: 408 VVR-EK*GRRNYTESTIRTSPFDENPSXXXXXXXSGQAYGSTNENNSDKANITKNSRSNS 584
R EK R+ + R+SP + + + +S + + ++ +
Sbjct: 415 SHRSEKHSSRSPRSRSKRSSPSPPPATGSKSRSSRSKDPVIVSAKSSRRRDRSRTPETRK 474
Query: 585 KDSLAEDNVSQSSLS 629
S++ED +SS S
Sbjct: 475 LKSISEDTEVKSSRS 489
>AE014296-221|AAF47472.1| 1150|Drosophila melanogaster CG2469-PB,
isoform B protein.
Length = 1150
Score = 30.3 bits (65), Expect = 3.3
Identities = 36/149 (24%), Positives = 61/149 (40%), Gaps = 1/149 (0%)
Frame = +3
Query: 147 NGKRQREQCCSRERKRSGRLYTNKKQTG*RETRFRGKGIANCKEIGA*IERKYRQKFGLG 326
+GKR + + SR R RSG + ++G R + + G+ + K
Sbjct: 1006 DGKRSKSRSRSRSRNRSGSRSGSASRSGSDREASRKRSRSRSGS-GSGSDSDEATKRKRA 1064
Query: 327 *GRDVRSGQSEGQGKGSRGNVSSRTKSVVREK*GRRNYTESTIRTSPFDENPSXXXXXXX 506
R G+S+ G +R SSR++S R K G R+ + S ++ + S
Sbjct: 1065 RNRIESGGESDRSGSRARSKSSSRSRS--RSKSGSRSRSRS--KSGSRSRSRSKSGSRSR 1120
Query: 507 SGQAYGSTNENNS-DKANITKNSRSNSKD 590
S GS + + S ++ SRS S +
Sbjct: 1121 SRSPSGSRSRSRSGSRSKSESRSRSGSPE 1149
>AE014296-220|AAN11469.1| 1150|Drosophila melanogaster CG2469-PA,
isoform A protein.
Length = 1150
Score = 30.3 bits (65), Expect = 3.3
Identities = 36/149 (24%), Positives = 61/149 (40%), Gaps = 1/149 (0%)
Frame = +3
Query: 147 NGKRQREQCCSRERKRSGRLYTNKKQTG*RETRFRGKGIANCKEIGA*IERKYRQKFGLG 326
+GKR + + SR R RSG + ++G R + + G+ + K
Sbjct: 1006 DGKRSKSRSRSRSRNRSGSRSGSASRSGSDREASRKRSRSRSGS-GSGSDSDEATKRKRA 1064
Query: 327 *GRDVRSGQSEGQGKGSRGNVSSRTKSVVREK*GRRNYTESTIRTSPFDENPSXXXXXXX 506
R G+S+ G +R SSR++S R K G R+ + S ++ + S
Sbjct: 1065 RNRIESGGESDRSGSRARSKSSSRSRS--RSKSGSRSRSRS--KSGSRSRSRSKSGSRSR 1120
Query: 507 SGQAYGSTNENNS-DKANITKNSRSNSKD 590
S GS + + S ++ SRS S +
Sbjct: 1121 SRSPSGSRSRSRSGSRSKSESRSRSGSPE 1149
>AE014134-1720|AAF52825.1| 513|Drosophila melanogaster CG4602-PA
protein.
Length = 513
Score = 30.3 bits (65), Expect = 3.3
Identities = 31/130 (23%), Positives = 55/130 (42%), Gaps = 8/130 (6%)
Frame = +3
Query: 87 NKKISRAHTA*QSAHRR*MRNGKRQREQCCSRERKRSGRLYTNKKQTG*RETRFRGKGIA 266
+++ SR+ + ++ RR R+G R+R R RS ++++ ++ +R R
Sbjct: 295 DRRTSRSRSHRSTSRRRSRRSGSRERRSVSRSRRSRSRGKHSSRSRSKRSRSRHRRSSSR 354
Query: 267 N--CKEIGA*IERKYRQKFGLG*GRD------VRSGQSEGQGKGSRGNVSSRTKSVVREK 422
+ + G R R + R RS +S G G G GN R++S R K
Sbjct: 355 SRRSRSRGGKHSRSSRSRGKRSRSRHRRSTSRSRSSRSHGTGGGGSGN-GKRSRSRERSK 413
Query: 423 *GRRNYTEST 452
R+ S+
Sbjct: 414 KSHRSEKHSS 423
>AE013599-2183|AAF58063.2| 382|Drosophila melanogaster CG8421-PB,
isoform B protein.
Length = 382
Score = 30.3 bits (65), Expect = 3.3
Identities = 29/113 (25%), Positives = 45/113 (39%), Gaps = 4/113 (3%)
Frame = +1
Query: 73 SKKPSIKKYHAPTPPDKVLTDDECEMEKDKXXXXXXXXXXXXDDCIQTKNKPADERPG-- 246
S +P +Y A + P K DD+ + ++DK Q +N P D P
Sbjct: 261 SVEPERSQYAAQSAPAKDNNDDDDDDDQDKNDADDGDDDEFESLAQQFENDPEDTVPAKA 320
Query: 247 --SGERGSPIVKRLAPKLNGNIDRSSVLGKAAMFEAGSPKAKEKDPAEMSLRE 399
S E+ PK G+ S + + EA A+++DP E LR+
Sbjct: 321 VESEEQDQDQADEEEPKEEGS---SWLASQIKPKEAAPAPAEKEDPFEQELRK 370
>U72492-1|AAB92662.1| 675|Drosophila melanogaster fruitless class I
female isoform protein.
Length = 675
Score = 29.9 bits (64), Expect = 4.3
Identities = 23/90 (25%), Positives = 39/90 (43%)
Frame = +3
Query: 3 LECNSSPRDGDNGGQRAAG*THRV*ETFNKKISRAHTA*QSAHRR*MRNGKRQREQCCSR 182
L+ + S +D +N + G + N S ++ S++R +G+R+RE+ R
Sbjct: 266 LQLDYSNKDNNNSNSSSTGGNNNN-NNNNNNNSSSNNNNSSSNRERNNSGERERERERER 324
Query: 183 ERKRSGRLYTNKKQTG*RETRFRGKGIANC 272
ER R L T + R R +NC
Sbjct: 325 ERDRDRELSTTPVEQLSSSKRRRKNSSSNC 354
>D84437-1|BAA12663.1| 855|Drosophila melanogaster fruitless protein
protein.
Length = 855
Score = 29.9 bits (64), Expect = 4.3
Identities = 23/90 (25%), Positives = 39/90 (43%)
Frame = +3
Query: 3 LECNSSPRDGDNGGQRAAG*THRV*ETFNKKISRAHTA*QSAHRR*MRNGKRQREQCCSR 182
L+ + S +D +N + G + N S ++ S++R +G+R+RE+ R
Sbjct: 279 LQLDYSNKDNNNSNSSSTGGNNNN-NNNNNNNSSSNNNNSSSNRERNNSGERERERERER 337
Query: 183 ERKRSGRLYTNKKQTG*RETRFRGKGIANC 272
ER R L T + R R +NC
Sbjct: 338 ERDRDRELSTTPVEQLSSSKRRRKNSSSNC 367
>BT024450-1|ABC86512.1| 960|Drosophila melanogaster GH19932p
protein.
Length = 960
Score = 29.9 bits (64), Expect = 4.3
Identities = 23/90 (25%), Positives = 39/90 (43%)
Frame = +3
Query: 3 LECNSSPRDGDNGGQRAAG*THRV*ETFNKKISRAHTA*QSAHRR*MRNGKRQREQCCSR 182
L+ + S +D +N + G + N S ++ S++R +G+R+RE+ R
Sbjct: 385 LQLDYSNKDNNNSNSSSTGGNNNN-NNNNNNNSSSNNNNSSSNRERNNSGERERERERER 443
Query: 183 ERKRSGRLYTNKKQTG*RETRFRGKGIANC 272
ER R L T + R R +NC
Sbjct: 444 ERDRDRELSTTPVEQLSSSKRRRKNSSSNC 473
>AF220177-1|AAG28588.1| 956|Drosophila melanogaster fruitless
type-A protein.
Length = 956
Score = 29.9 bits (64), Expect = 4.3
Identities = 23/90 (25%), Positives = 39/90 (43%)
Frame = +3
Query: 3 LECNSSPRDGDNGGQRAAG*THRV*ETFNKKISRAHTA*QSAHRR*MRNGKRQREQCCSR 182
L+ + S +D +N + G + N S ++ S++R +G+R+RE+ R
Sbjct: 380 LQLDYSNKDNNNSNSSSTGGNNNN-NNNNNNNSSSNNNNSSSNRERNNSGERERERERER 438
Query: 183 ERKRSGRLYTNKKQTG*RETRFRGKGIANC 272
ER R L T + R R +NC
Sbjct: 439 ERDRDRELSTTPVEQLSSSKRRRKNSSSNC 468
>AF220176-1|AAG28587.1| 855|Drosophila melanogaster fruitless
type-A protein.
Length = 855
Score = 29.9 bits (64), Expect = 4.3
Identities = 23/90 (25%), Positives = 39/90 (43%)
Frame = +3
Query: 3 LECNSSPRDGDNGGQRAAG*THRV*ETFNKKISRAHTA*QSAHRR*MRNGKRQREQCCSR 182
L+ + S +D +N + G + N S ++ S++R +G+R+RE+ R
Sbjct: 279 LQLDYSNKDNNNSNSSSTGGNNNN-NNNNNNNSSSNNNNSSSNRERNNSGERERERERER 337
Query: 183 ERKRSGRLYTNKKQTG*RETRFRGKGIANC 272
ER R L T + R R +NC
Sbjct: 338 ERDRDRELSTTPVEQLSSSKRRRKNSSSNC 367
>AF039231-1|AAB96677.1| 776|Drosophila melanogaster fruitless class
I male isoform protein.
Length = 776
Score = 29.9 bits (64), Expect = 4.3
Identities = 23/90 (25%), Positives = 39/90 (43%)
Frame = +3
Query: 3 LECNSSPRDGDNGGQRAAG*THRV*ETFNKKISRAHTA*QSAHRR*MRNGKRQREQCCSR 182
L+ + S +D +N + G + N S ++ S++R +G+R+RE+ R
Sbjct: 367 LQLDYSNKDNNNSNSSSTGGNNNN-NNNNNNNSSSNNNNSSSNRERNNSGERERERERER 425
Query: 183 ERKRSGRLYTNKKQTG*RETRFRGKGIANC 272
ER R L T + R R +NC
Sbjct: 426 ERDRDRELSTTPVEQLSSSKRRRKNSSSNC 455
>AE014297-2540|AAN13777.1| 665|Drosophila melanogaster CG14307-PD,
isoform D protein.
Length = 665
Score = 29.9 bits (64), Expect = 4.3
Identities = 23/90 (25%), Positives = 39/90 (43%)
Frame = +3
Query: 3 LECNSSPRDGDNGGQRAAG*THRV*ETFNKKISRAHTA*QSAHRR*MRNGKRQREQCCSR 182
L+ + S +D +N + G + N S ++ S++R +G+R+RE+ R
Sbjct: 279 LQLDYSNKDNNNSNSSSTGGNNNN-NNNNNNNSSSNNNNSSSNRERNNSGERERERERER 337
Query: 183 ERKRSGRLYTNKKQTG*RETRFRGKGIANC 272
ER R L T + R R +NC
Sbjct: 338 ERDRDRELSTTPVEQLSSSKRRRKNSSSNC 367
>AE014297-2539|AAF55564.2| 516|Drosophila melanogaster CG14307-PA,
isoform A protein.
Length = 516
Score = 29.9 bits (64), Expect = 4.3
Identities = 23/90 (25%), Positives = 39/90 (43%)
Frame = +3
Query: 3 LECNSSPRDGDNGGQRAAG*THRV*ETFNKKISRAHTA*QSAHRR*MRNGKRQREQCCSR 182
L+ + S +D +N + G + N S ++ S++R +G+R+RE+ R
Sbjct: 279 LQLDYSNKDNNNSNSSSTGGNNNN-NNNNNNNSSSNNNNSSSNRERNNSGERERERERER 337
Query: 183 ERKRSGRLYTNKKQTG*RETRFRGKGIANC 272
ER R L T + R R +NC
Sbjct: 338 ERDRDRELSTTPVEQLSSSKRRRKNSSSNC 367
>AE014297-2538|AAS65176.1| 854|Drosophila melanogaster CG14307-PM,
isoform M protein.
Length = 854
Score = 29.9 bits (64), Expect = 4.3
Identities = 23/90 (25%), Positives = 39/90 (43%)
Frame = +3
Query: 3 LECNSSPRDGDNGGQRAAG*THRV*ETFNKKISRAHTA*QSAHRR*MRNGKRQREQCCSR 182
L+ + S +D +N + G + N S ++ S++R +G+R+RE+ R
Sbjct: 279 LQLDYSNKDNNNSNSSSTGGNNNN-NNNNNNNSSSNNNNSSSNRERNNSGERERERERER 337
Query: 183 ERKRSGRLYTNKKQTG*RETRFRGKGIANC 272
ER R L T + R R +NC
Sbjct: 338 ERDRDRELSTTPVEQLSSSKRRRKNSSSNC 367
>AE014297-2537|AAS65175.1| 854|Drosophila melanogaster CG14307-PL,
isoform L protein.
Length = 854
Score = 29.9 bits (64), Expect = 4.3
Identities = 23/90 (25%), Positives = 39/90 (43%)
Frame = +3
Query: 3 LECNSSPRDGDNGGQRAAG*THRV*ETFNKKISRAHTA*QSAHRR*MRNGKRQREQCCSR 182
L+ + S +D +N + G + N S ++ S++R +G+R+RE+ R
Sbjct: 279 LQLDYSNKDNNNSNSSSTGGNNNN-NNNNNNNSSSNNNNSSSNRERNNSGERERERERER 337
Query: 183 ERKRSGRLYTNKKQTG*RETRFRGKGIANC 272
ER R L T + R R +NC
Sbjct: 338 ERDRDRELSTTPVEQLSSSKRRRKNSSSNC 367
>AE014297-2536|AAF55565.2| 854|Drosophila melanogaster CG14307-PC,
isoform C protein.
Length = 854
Score = 29.9 bits (64), Expect = 4.3
Identities = 23/90 (25%), Positives = 39/90 (43%)
Frame = +3
Query: 3 LECNSSPRDGDNGGQRAAG*THRV*ETFNKKISRAHTA*QSAHRR*MRNGKRQREQCCSR 182
L+ + S +D +N + G + N S ++ S++R +G+R+RE+ R
Sbjct: 279 LQLDYSNKDNNNSNSSSTGGNNNN-NNNNNNNSSSNNNNSSSNRERNNSGERERERERER 337
Query: 183 ERKRSGRLYTNKKQTG*RETRFRGKGIANC 272
ER R L T + R R +NC
Sbjct: 338 ERDRDRELSTTPVEQLSSSKRRRKNSSSNC 367
>AE014297-2535|AAS65174.1| 906|Drosophila melanogaster CG14307-PJ,
isoform J protein.
Length = 906
Score = 29.9 bits (64), Expect = 4.3
Identities = 23/90 (25%), Positives = 39/90 (43%)
Frame = +3
Query: 3 LECNSSPRDGDNGGQRAAG*THRV*ETFNKKISRAHTA*QSAHRR*MRNGKRQREQCCSR 182
L+ + S +D +N + G + N S ++ S++R +G+R+RE+ R
Sbjct: 331 LQLDYSNKDNNNSNSSSTGGNNNN-NNNNNNNSSSNNNNSSSNRERNNSGERERERERER 389
Query: 183 ERKRSGRLYTNKKQTG*RETRFRGKGIANC 272
ER R L T + R R +NC
Sbjct: 390 ERDRDRELSTTPVEQLSSSKRRRKNSSSNC 419
>AE014297-2534|AAS65173.1| 870|Drosophila melanogaster CG14307-PI,
isoform I protein.
Length = 870
Score = 29.9 bits (64), Expect = 4.3
Identities = 23/90 (25%), Positives = 39/90 (43%)
Frame = +3
Query: 3 LECNSSPRDGDNGGQRAAG*THRV*ETFNKKISRAHTA*QSAHRR*MRNGKRQREQCCSR 182
L+ + S +D +N + G + N S ++ S++R +G+R+RE+ R
Sbjct: 295 LQLDYSNKDNNNSNSSSTGGNNNN-NNNNNNNSSSNNNNSSSNRERNNSGERERERERER 353
Query: 183 ERKRSGRLYTNKKQTG*RETRFRGKGIANC 272
ER R L T + R R +NC
Sbjct: 354 ERDRDRELSTTPVEQLSSSKRRRKNSSSNC 383
>AE014297-2533|AAN13776.1| 955|Drosophila melanogaster CG14307-PE,
isoform E protein.
Length = 955
Score = 29.9 bits (64), Expect = 4.3
Identities = 23/90 (25%), Positives = 39/90 (43%)
Frame = +3
Query: 3 LECNSSPRDGDNGGQRAAG*THRV*ETFNKKISRAHTA*QSAHRR*MRNGKRQREQCCSR 182
L+ + S +D +N + G + N S ++ S++R +G+R+RE+ R
Sbjct: 380 LQLDYSNKDNNNSNSSSTGGNNNN-NNNNNNNSSSNNNNSSSNRERNNSGERERERERER 438
Query: 183 ERKRSGRLYTNKKQTG*RETRFRGKGIANC 272
ER R L T + R R +NC
Sbjct: 439 ERDRDRELSTTPVEQLSSSKRRRKNSSSNC 468
>AE014297-2532|AAN13775.1| 695|Drosophila melanogaster CG14307-PH,
isoform H protein.
Length = 695
Score = 29.9 bits (64), Expect = 4.3
Identities = 23/90 (25%), Positives = 39/90 (43%)
Frame = +3
Query: 3 LECNSSPRDGDNGGQRAAG*THRV*ETFNKKISRAHTA*QSAHRR*MRNGKRQREQCCSR 182
L+ + S +D +N + G + N S ++ S++R +G+R+RE+ R
Sbjct: 279 LQLDYSNKDNNNSNSSSTGGNNNN-NNNNNNNSSSNNNNSSSNRERNNSGERERERERER 337
Query: 183 ERKRSGRLYTNKKQTG*RETRFRGKGIANC 272
ER R L T + R R +NC
Sbjct: 338 ERDRDRELSTTPVEQLSSSKRRRKNSSSNC 367
>AE014297-2531|AAS65172.1| 705|Drosophila melanogaster CG14307-PK,
isoform K protein.
Length = 705
Score = 29.9 bits (64), Expect = 4.3
Identities = 23/90 (25%), Positives = 39/90 (43%)
Frame = +3
Query: 3 LECNSSPRDGDNGGQRAAG*THRV*ETFNKKISRAHTA*QSAHRR*MRNGKRQREQCCSR 182
L+ + S +D +N + G + N S ++ S++R +G+R+RE+ R
Sbjct: 289 LQLDYSNKDNNNSNSSSTGGNNNN-NNNNNNNSSSNNNNSSSNRERNNSGERERERERER 347
Query: 183 ERKRSGRLYTNKKQTG*RETRFRGKGIANC 272
ER R L T + R R +NC
Sbjct: 348 ERDRDRELSTTPVEQLSSSKRRRKNSSSNC 377
>AE014297-2530|AAF55563.2| 796|Drosophila melanogaster CG14307-PG,
isoform G protein.
Length = 796
Score = 29.9 bits (64), Expect = 4.3
Identities = 23/90 (25%), Positives = 39/90 (43%)
Frame = +3
Query: 3 LECNSSPRDGDNGGQRAAG*THRV*ETFNKKISRAHTA*QSAHRR*MRNGKRQREQCCSR 182
L+ + S +D +N + G + N S ++ S++R +G+R+RE+ R
Sbjct: 380 LQLDYSNKDNNNSNSSSTGGNNNN-NNNNNNNSSSNNNNSSSNRERNNSGERERERERER 438
Query: 183 ERKRSGRLYTNKKQTG*RETRFRGKGIANC 272
ER R L T + R R +NC
Sbjct: 439 ERDRDRELSTTPVEQLSSSKRRRKNSSSNC 468
>AE014297-2529|AAN13774.1| 688|Drosophila melanogaster CG14307-PF,
isoform F protein.
Length = 688
Score = 29.9 bits (64), Expect = 4.3
Identities = 23/90 (25%), Positives = 39/90 (43%)
Frame = +3
Query: 3 LECNSSPRDGDNGGQRAAG*THRV*ETFNKKISRAHTA*QSAHRR*MRNGKRQREQCCSR 182
L+ + S +D +N + G + N S ++ S++R +G+R+RE+ R
Sbjct: 279 LQLDYSNKDNNNSNSSSTGGNNNN-NNNNNNNSSSNNNNSSSNRERNNSGERERERERER 337
Query: 183 ERKRSGRLYTNKKQTG*RETRFRGKGIANC 272
ER R L T + R R +NC
Sbjct: 338 ERDRDRELSTTPVEQLSSSKRRRKNSSSNC 367
>AE014297-2528|AAF55562.2| 789|Drosophila melanogaster CG14307-PB,
isoform B protein.
Length = 789
Score = 29.9 bits (64), Expect = 4.3
Identities = 23/90 (25%), Positives = 39/90 (43%)
Frame = +3
Query: 3 LECNSSPRDGDNGGQRAAG*THRV*ETFNKKISRAHTA*QSAHRR*MRNGKRQREQCCSR 182
L+ + S +D +N + G + N S ++ S++R +G+R+RE+ R
Sbjct: 380 LQLDYSNKDNNNSNSSSTGGNNNN-NNNNNNNSSSNNNNSSSNRERNNSGERERERERER 438
Query: 183 ERKRSGRLYTNKKQTG*RETRFRGKGIANC 272
ER R L T + R R +NC
Sbjct: 439 ERDRDRELSTTPVEQLSSSKRRRKNSSSNC 468
>Y17920-1|CAA76940.1| 4116|Drosophila melanogaster CALO protein
protein.
Length = 4116
Score = 29.5 bits (63), Expect = 5.7
Identities = 21/68 (30%), Positives = 34/68 (50%), Gaps = 4/68 (5%)
Frame = +3
Query: 447 STIRTSPFDENPSXXXXXXXSG-QAYGSTNENNS---DKANITKNSRSNSKDSLAEDNVS 614
ST+RTSP + S SG ++ G T+ +S D AN + + ++KD + S
Sbjct: 1803 STLRTSPAEPAGSGGSESGGSGVESIGGTSARSSNFGDHANASPPRQGSTKDDQEQPGPS 1862
Query: 615 QSSLSGGI 638
+ SGG+
Sbjct: 1863 GVAGSGGV 1870
>AF096897-1|AAD20450.1| 5322|Drosophila melanogaster pushover protein.
Length = 5322
Score = 29.5 bits (63), Expect = 5.7
Identities = 21/68 (30%), Positives = 34/68 (50%), Gaps = 4/68 (5%)
Frame = +3
Query: 447 STIRTSPFDENPSXXXXXXXSG-QAYGSTNENNS---DKANITKNSRSNSKDSLAEDNVS 614
ST+RTSP + S SG ++ G T+ +S D AN + + ++KD + S
Sbjct: 3009 STLRTSPAEPAGSGGSESGGSGVESIGGTSARSSNFGDHANASPPRQGSTKDDQEQPGPS 3068
Query: 615 QSSLSGGI 638
+ SGG+
Sbjct: 3069 GVAGSGGV 3076
>AF096896-1|AAD20449.1| 4120|Drosophila melanogaster pushover protein.
Length = 4120
Score = 29.5 bits (63), Expect = 5.7
Identities = 21/68 (30%), Positives = 34/68 (50%), Gaps = 4/68 (5%)
Frame = +3
Query: 447 STIRTSPFDENPSXXXXXXXSG-QAYGSTNENNS---DKANITKNSRSNSKDSLAEDNVS 614
ST+RTSP + S SG ++ G T+ +S D AN + + ++KD + S
Sbjct: 3009 STLRTSPAEPAGSGGSESGGSGVESIGGTSARSSNFGDHANASPPRQGSTKDDQEQPGPS 3068
Query: 615 QSSLSGGI 638
+ SGG+
Sbjct: 3069 GVAGSGGV 3076
>AE014134-1390|AAF52598.1| 5322|Drosophila melanogaster CG14472-PA
protein.
Length = 5322
Score = 29.5 bits (63), Expect = 5.7
Identities = 21/68 (30%), Positives = 34/68 (50%), Gaps = 4/68 (5%)
Frame = +3
Query: 447 STIRTSPFDENPSXXXXXXXSG-QAYGSTNENNS---DKANITKNSRSNSKDSLAEDNVS 614
ST+RTSP + S SG ++ G T+ +S D AN + + ++KD + S
Sbjct: 3009 STLRTSPAEPAGSGGSESGGSGVESIGGTSARSSNFGDHANASPPRQGSTKDDQEQPGPS 3068
Query: 615 QSSLSGGI 638
+ SGG+
Sbjct: 3069 GVAGSGGV 3076
>AY118712-1|AAM50572.1| 1266|Drosophila melanogaster AT25667p
protein.
Length = 1266
Score = 28.7 bits (61), Expect = 9.9
Identities = 17/65 (26%), Positives = 31/65 (47%)
Frame = +1
Query: 289 KLNGNIDRSSVLGKAAMFEAGSPKAKEKDPAEMSLRERKALFEKNKGAAIIPKAPFGLAP 468
K + +SV KAA +GSPK+ E + R++K++ + + P P P
Sbjct: 379 KKKASCPNASVSKKAATVPSGSPKSPENGAPKAEPRKKKSM----RQGVVNPSKPKSKKP 434
Query: 469 STKTL 483
++K +
Sbjct: 435 ASKAI 439
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,914,550
Number of Sequences: 53049
Number of extensions: 622603
Number of successful extensions: 2882
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 2605
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2863
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3798466620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -