Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP11_FL5_D07
(825 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_06_0039 - 9966744-9967535,9968241-9968482,9969021-9969223,996... 31 0.84
12_02_1174 - 26696869-26698191 31 1.5
05_01_0004 - 34967-35149,35340-35501,36078-36225,36309-36385,365... 31 1.5
02_05_0686 - 30900748-30902167,30903442-30904742 31 1.5
11_01_0288 + 2151552-2151581,2151818-2151893,2152019-2153460 30 1.9
07_01_0516 - 3850252-3852870 30 1.9
04_04_0959 + 29692740-29693035,29693102-29693267,29693433-296936... 30 1.9
04_04_0675 + 27183826-27184443 30 1.9
01_07_0021 - 40533864-40534583,40534779-40534814,40534909-405350... 30 1.9
01_05_0490 + 22672241-22674679 30 2.6
11_01_0066 - 536281-537196,537397-537452 29 3.4
10_08_0870 - 21178136-21178534 29 3.4
08_01_0059 - 394001-394708 29 3.4
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 29 4.5
02_01_0458 + 3291563-3291733,3292082-3292769,3292847-3293363,329... 29 4.5
09_02_0603 - 11150739-11150746,11150791-11151340 29 5.9
03_01_0515 - 3864796-3865425 29 5.9
02_01_0239 + 1589008-1589166,1589874-1589945 29 5.9
08_01_1038 + 10540185-10540709 28 7.8
08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,330... 28 7.8
07_03_0792 - 21541301-21542143,21542426-21542661,21543177-215433... 28 7.8
04_03_0660 + 18463011-18463322,18463424-18463516,18464500-184646... 28 7.8
04_01_0530 - 6928528-6929500,6929514-6930964 28 7.8
02_01_0054 - 404464-405152,406087-406618 28 7.8
>10_06_0039 -
9966744-9967535,9968241-9968482,9969021-9969223,
9969333-9970645
Length = 849
Score = 31.5 bits (68), Expect = 0.84
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = -1
Query: 819 PPEXPPPXRXXRXXRRPPPXGVXPXPP 739
PP PPP R +PPP P PP
Sbjct: 332 PPPPPPPSRFNNTTPKPPPPPPPPEPP 358
>12_02_1174 - 26696869-26698191
Length = 440
Score = 30.7 bits (66), Expect = 1.5
Identities = 12/28 (42%), Positives = 13/28 (46%)
Frame = -1
Query: 822 EPPEXPPPXRXXRXXRRPPPXGVXPXPP 739
EPP PPP + PPP P PP
Sbjct: 136 EPPHRPPPVKPQPPPSLPPPPPPPPPPP 163
Score = 29.1 bits (62), Expect = 4.5
Identities = 16/37 (43%), Positives = 16/37 (43%), Gaps = 2/37 (5%)
Frame = -1
Query: 819 PPEXPPPXRXXR--XXRRPPPXGVXPXPPAXXTRXPP 715
PP PPP R RPPP V P PP PP
Sbjct: 123 PPPPPPPRTRTRVEPPHRPPP--VKPQPPPSLPPPPP 157
>05_01_0004 -
34967-35149,35340-35501,36078-36225,36309-36385,
36507-36577,36850-37263,37518-38268
Length = 601
Score = 30.7 bits (66), Expect = 1.5
Identities = 14/36 (38%), Positives = 15/36 (41%), Gaps = 1/36 (2%)
Frame = -1
Query: 819 PPEXPPPXRXXRXXRRPPPXGV-XPXPPAXXTRXPP 715
PP PPP R +PP P PP T PP
Sbjct: 79 PPPPPPPPRNSPSPPKPPSQAAQSPLPPTTTTTTPP 114
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 30.7 bits (66), Expect = 1.5
Identities = 15/35 (42%), Positives = 15/35 (42%)
Frame = -1
Query: 819 PPEXPPPXRXXRXXRRPPPXGVXPXPPAXXTRXPP 715
PP PPP PPP G P PPA PP
Sbjct: 326 PPPPPPPKAAPPP---PPPKGPPPPPPAKGPPPPP 357
Score = 29.9 bits (64), Expect = 2.6
Identities = 13/35 (37%), Positives = 13/35 (37%)
Frame = -1
Query: 819 PPEXPPPXRXXRXXRRPPPXGVXPXPPAXXTRXPP 715
PP PPP PPP P PP PP
Sbjct: 313 PPPPPPPKPAAAAPPPPPPPKAAPPPPPPKGPPPP 347
Score = 29.9 bits (64), Expect = 2.6
Identities = 14/42 (33%), Positives = 16/42 (38%)
Frame = -1
Query: 819 PPEXPPPXRXXRXXRRPPPXGVXPXPPAXXTRXPPXXXRXGG 694
PP+ PP + PPP P PP PP GG
Sbjct: 331 PPKAAPPPPPPKGPPPPPPAKGPPPPPPPKGPSPPPPPPPGG 372
Score = 28.3 bits (60), Expect = 7.8
Identities = 12/35 (34%), Positives = 12/35 (34%)
Frame = -1
Query: 819 PPEXPPPXRXXRXXRRPPPXGVXPXPPAXXTRXPP 715
PP PP PPP P PP PP
Sbjct: 314 PPPPPPKPAAAAPPPPPPPKAAPPPPPPKGPPPPP 348
>11_01_0288 + 2151552-2151581,2151818-2151893,2152019-2153460
Length = 515
Score = 30.3 bits (65), Expect = 1.9
Identities = 14/35 (40%), Positives = 17/35 (48%)
Frame = +2
Query: 716 GGXRVXXAGGXGXTPXGGGLLXXRXXRXGGGXSGG 820
GG + A G G P GGG + + GGG GG
Sbjct: 308 GGGQPNNAKGGGGAPNGGGNHPAQGKKGGGGQGGG 342
>07_01_0516 - 3850252-3852870
Length = 872
Score = 30.3 bits (65), Expect = 1.9
Identities = 13/32 (40%), Positives = 14/32 (43%)
Frame = -1
Query: 819 PPEXPPPXRXXRXXRRPPPXGVXPXPPAXXTR 724
PP+ PP R PPP P PP TR
Sbjct: 16 PPQPPPTSRPLPPPPPPPPPAHGPSPPPPRTR 47
>04_04_0959 +
29692740-29693035,29693102-29693267,29693433-29693612,
29693703-29693771,29693888-29694088,29694187-29694240,
29694325-29694386,29694488-29694620,29694789-29694899,
29695008-29695104,29695638-29695714,29696129-29696194,
29696431-29696583,29697392-29697447,29697524-29697584,
29697656-29697766,29698010-29698144,29698217-29698447,
29699001-29699075,29699161-29699282,29699381-29699453,
29699538-29699642,29699728-29699895,29700079-29700148,
29700224-29700375,29700574-29700651,29700744-29700836,
29700961-29701098,29701237-29701276,29701350-29701423,
29701777-29701911,29702345-29702464,29702778-29702939
Length = 1287
Score = 30.3 bits (65), Expect = 1.9
Identities = 23/80 (28%), Positives = 30/80 (37%)
Frame = +3
Query: 90 CGRMRKRNITVPHDRLAPRNVRSGLPPRLQNRSQPDPAFETC*HS*VRVHRANTGRSSNE 269
CG V H L V LP R + A C + +R HR ++ RS
Sbjct: 20 CGLAAVAAGQVRHSPLLRAPVPGLLPERQAPEGRRPLAASRCLPTCLRRHRRSSRRSHRR 79
Query: 270 LDRQTTELERRXSGAAALGW 329
R++ L RR LGW
Sbjct: 80 CRRRSPRLWRRSGSGFLLGW 99
>04_04_0675 + 27183826-27184443
Length = 205
Score = 30.3 bits (65), Expect = 1.9
Identities = 16/49 (32%), Positives = 20/49 (40%)
Frame = +1
Query: 553 RRRRPFPGVXSVXXXXXPGVXEXXSMXPGXXPAPXXPPXQPXAXXXKPP 699
+RRRP P + ++ P S P P P PP P A PP
Sbjct: 80 KRRRPCPLLDAIDLLDGPSPSASPSQSPS-PPPPASPPPLPPAPSSPPP 127
>01_07_0021 -
40533864-40534583,40534779-40534814,40534909-40535048,
40535837-40535922,40536430-40536653,40536770-40536865,
40538766-40538833,40539945-40540055,40540799-40540955
Length = 545
Score = 30.3 bits (65), Expect = 1.9
Identities = 12/34 (35%), Positives = 15/34 (44%)
Frame = -1
Query: 816 PEXPPPXRXXRXXRRPPPXGVXPXPPAXXTRXPP 715
P+ PPP +PPP P PP + PP
Sbjct: 415 PQSPPPPLPSDAFEQPPPPPEHPPPPESTSPPPP 448
>01_05_0490 + 22672241-22674679
Length = 812
Score = 29.9 bits (64), Expect = 2.6
Identities = 16/42 (38%), Positives = 19/42 (45%), Gaps = 2/42 (4%)
Frame = -1
Query: 822 EPPEXPPPXRXXRXXRRP--PPXGVXPXPPAXXTRXPPXXXR 703
+PP PPP R R+P PP P PP + PP R
Sbjct: 640 QPPPPPPP--TTRRSRKPPQPPSRPAPPPPPPPQQQPPFYPR 679
>11_01_0066 - 536281-537196,537397-537452
Length = 323
Score = 29.5 bits (63), Expect = 3.4
Identities = 14/35 (40%), Positives = 15/35 (42%)
Frame = -1
Query: 819 PPEXPPPXRXXRXXRRPPPXGVXPXPPAXXTRXPP 715
PP PPP PPP P PP+ T PP
Sbjct: 211 PPASPPPPSIAT----PPPSPASPPPPSTATPPPP 241
>10_08_0870 - 21178136-21178534
Length = 132
Score = 29.5 bits (63), Expect = 3.4
Identities = 12/26 (46%), Positives = 13/26 (50%)
Frame = +1
Query: 652 PXXPPXQPXAXXXKPPXSXXGGGXSC 729
P P +P A KPP GGG SC
Sbjct: 23 PDCPSPKPPAPRPKPPTPHYGGGSSC 48
>08_01_0059 - 394001-394708
Length = 235
Score = 29.5 bits (63), Expect = 3.4
Identities = 13/35 (37%), Positives = 14/35 (40%)
Frame = -1
Query: 819 PPEXPPPXRXXRXXRRPPPXGVXPXPPAXXTRXPP 715
PP PP PPP P PP+ R PP
Sbjct: 2 PPPPPPRRAPPPPATPPPPPRRAPPPPSPPIRPPP 36
>10_01_0100 +
1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 29.1 bits (62), Expect = 4.5
Identities = 13/35 (37%), Positives = 13/35 (37%)
Frame = -1
Query: 819 PPEXPPPXRXXRXXRRPPPXGVXPXPPAXXTRXPP 715
PP PPP P P P P A R PP
Sbjct: 714 PPPPPPPANRSNGPSAPAPPLPPPLPAAANKRNPP 748
Score = 28.3 bits (60), Expect = 7.8
Identities = 11/27 (40%), Positives = 12/27 (44%)
Frame = -1
Query: 819 PPEXPPPXRXXRXXRRPPPXGVXPXPP 739
PP PPP + PPP P PP
Sbjct: 547 PPPPPPPPSGNKPAFSPPPPPPPPPPP 573
>02_01_0458 +
3291563-3291733,3292082-3292769,3292847-3293363,
3293438-3293637,3294137-3294372,3294469-3295302
Length = 881
Score = 29.1 bits (62), Expect = 4.5
Identities = 13/35 (37%), Positives = 13/35 (37%)
Frame = -1
Query: 819 PPEXPPPXRXXRXXRRPPPXGVXPXPPAXXTRXPP 715
PP PPP PPP P PP PP
Sbjct: 353 PPPPPPPPPPPPPPPPPPPRPPPPPPPIKKGAPPP 387
>09_02_0603 - 11150739-11150746,11150791-11151340
Length = 185
Score = 28.7 bits (61), Expect = 5.9
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = -1
Query: 819 PPEXPPPXRXXRXXRRPPPXGVXPXPPAXXTRXP 718
PP PP PPP G P PP T P
Sbjct: 22 PPASRPPRLEKGNFALPPPFGFPPPPPPGSTFVP 55
>03_01_0515 - 3864796-3865425
Length = 209
Score = 28.7 bits (61), Expect = 5.9
Identities = 12/34 (35%), Positives = 13/34 (38%)
Frame = -1
Query: 816 PEXPPPXRXXRXXRRPPPXGVXPXPPAXXTRXPP 715
P PPP PPP + P PP PP
Sbjct: 68 PLMPPPPPPPSVTSSPPPPPLPPPPPPPAASPPP 101
Score = 28.3 bits (60), Expect = 7.8
Identities = 12/35 (34%), Positives = 13/35 (37%)
Frame = -1
Query: 819 PPEXPPPXRXXRXXRRPPPXGVXPXPPAXXTRXPP 715
PP PPP PPP P P + PP
Sbjct: 85 PPPLPPPPPPPAASPPPPPPSPPPPSPVKSSPPPP 119
>02_01_0239 + 1589008-1589166,1589874-1589945
Length = 76
Score = 28.7 bits (61), Expect = 5.9
Identities = 14/28 (50%), Positives = 14/28 (50%)
Frame = +2
Query: 740 GGXGXTPXGGGLLXXRXXRXGGGXSGGS 823
GG G GG L R GGG SGGS
Sbjct: 24 GGVGSDQEEGGTLLEREGGVGGGESGGS 51
>08_01_1038 + 10540185-10540709
Length = 174
Score = 28.3 bits (60), Expect = 7.8
Identities = 15/35 (42%), Positives = 15/35 (42%)
Frame = +2
Query: 716 GGXRVXXAGGXGXTPXGGGLLXXRXXRXGGGXSGG 820
GG V GG G GGGL GGG GG
Sbjct: 20 GGGGVGLGGGSGLGGGGGGLGKGGVRGGGGGLGGG 54
>08_01_0375 -
3307206-3307316,3307870-3307965,3308061-3308132,
3308247-3308315,3308427-3308513,3308753-3308858,
3309118-3309237,3309327-3309406,3309497-3309878,
3310746-3310814,3311460-3312202
Length = 644
Score = 28.3 bits (60), Expect = 7.8
Identities = 12/34 (35%), Positives = 13/34 (38%)
Frame = -1
Query: 816 PEXPPPXRXXRXXRRPPPXGVXPXPPAXXTRXPP 715
P PPP + PPP P PP PP
Sbjct: 92 PPPPPPPYGVNSSQPPPPPPPPPSPPPSAPPPPP 125
>07_03_0792 -
21541301-21542143,21542426-21542661,21543177-21543373,
21543459-21544173,21544250-21544892,21545970-21546139,
21546442-21546943
Length = 1101
Score = 28.3 bits (60), Expect = 7.8
Identities = 14/35 (40%), Positives = 14/35 (40%)
Frame = -1
Query: 819 PPEXPPPXRXXRXXRRPPPXGVXPXPPAXXTRXPP 715
PPE PP PPP P PP R PP
Sbjct: 586 PPEPSPPPAPKAAPPPPPPKSTGPGPP----RPPP 616
>04_03_0660 +
18463011-18463322,18463424-18463516,18464500-18464607,
18464892-18465044,18465256-18465354,18465443-18465571,
18465987-18466166,18466208-18466246,18466247-18466363,
18466445-18466609
Length = 464
Score = 28.3 bits (60), Expect = 7.8
Identities = 15/37 (40%), Positives = 15/37 (40%)
Frame = +1
Query: 634 PGXXPAPXXPPXQPXAXXXKPPXSXXGGGXSCXSGXG 744
P P P PP QP A PP GGG S G
Sbjct: 49 PPRPPPPPPPPTQP-APPPPPPARSGGGGGSDDGSDG 84
>04_01_0530 - 6928528-6929500,6929514-6930964
Length = 807
Score = 28.3 bits (60), Expect = 7.8
Identities = 16/47 (34%), Positives = 27/47 (57%)
Frame = +3
Query: 63 VSPHLCYS*CGRMRKRNITVPHDRLAPRNVRSGLPPRLQNRSQPDPA 203
+SP+LCY+ C RK+ +L+ + SGLPP++ S+ + A
Sbjct: 475 LSPNLCYAFCITSRKKT------QLSQPSNNSGLPPKIFTYSELEKA 515
>02_01_0054 - 404464-405152,406087-406618
Length = 406
Score = 28.3 bits (60), Expect = 7.8
Identities = 26/79 (32%), Positives = 32/79 (40%), Gaps = 7/79 (8%)
Frame = -1
Query: 336 EDTSQVLQPHSPCVPTQSFVDPIHL-------KICLYSHGGLGLTNVSMSQMQGQVDYDF 178
E S + P V + +VDP L K +YS G L L ++ S G D
Sbjct: 260 EGFSAAVAPTRAAVGSPGYVDPFFLRTGIVSKKSDVYSFGVLLLEAITGSPAAGIPGPDG 319
Query: 177 GVGGGVPIVRCEERVDHEG 121
G GGG R RV EG
Sbjct: 320 GAGGGNLTARLLPRVRTEG 338
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,771,458
Number of Sequences: 37544
Number of extensions: 404728
Number of successful extensions: 2250
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1336
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2070
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2268190812
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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