Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP11_FL5_D07
(825 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X78349-1|CAA55144.1| 686|Drosophila melanogaster Grd protein. 33 0.63
AE014296-2969|AAF49298.2| 686|Drosophila melanogaster CG7446-PA... 33 0.63
U13178-1|AAA86955.1| 404|Drosophila melanogaster RNA binding pr... 31 2.5
M15765-1|AAA70425.1| 365|Drosophila melanogaster unknown protei... 31 2.5
L37083-1|AAC41563.1| 404|Drosophila melanogaster RNA binding pr... 31 2.5
X53583-1|CAA37652.1| 576|Drosophila melanogaster alpha-2-subuni... 30 3.3
X52274-1|CAA36517.1| 576|Drosophila melanogaster nicotinic acet... 30 3.3
AY058446-1|AAL13675.1| 576|Drosophila melanogaster GH22843p pro... 30 3.3
AE014297-3556|AAF56303.1| 576|Drosophila melanogaster CG6844-PB... 30 3.3
AE014297-3555|AAF56302.2| 576|Drosophila melanogaster CG6844-PA... 30 3.3
AE013599-399|AAM68891.2| 409|Drosophila melanogaster CG11112-PB... 29 5.8
AY119486-1|AAM50140.1| 1049|Drosophila melanogaster GH07742p pro... 29 7.7
AY089614-1|AAL90352.1| 417|Drosophila melanogaster RE28792p pro... 29 7.7
AY060989-1|AAL28537.1| 222|Drosophila melanogaster GM14833p pro... 29 7.7
AJ243904-1|CAB64937.1| 773|Drosophila melanogaster SF1 protein ... 29 7.7
AE014297-2366|AAF55430.3| 787|Drosophila melanogaster CG5836-PA... 29 7.7
AE014134-691|AAF51054.1| 1059|Drosophila melanogaster CG3399-PA,... 29 7.7
AE014134-690|AAN10367.1| 1049|Drosophila melanogaster CG3399-PB,... 29 7.7
AE014134-689|AAF51053.2| 1207|Drosophila melanogaster CG3399-PD,... 29 7.7
AE014134-688|AAN10366.1| 1154|Drosophila melanogaster CG3399-PC,... 29 7.7
>X78349-1|CAA55144.1| 686|Drosophila melanogaster Grd protein.
Length = 686
Score = 32.7 bits (71), Expect = 0.63
Identities = 18/70 (25%), Positives = 35/70 (50%), Gaps = 4/70 (5%)
Frame = +1
Query: 97 ECENATSLSLMIDSLLATYDRDSPPD---SKIVVNLTLHLRHAN-IRESESTVRIQADLQ 264
+ N ++S ++D+LL YD PD + + + +R I E + T + +
Sbjct: 102 QSNNHANISELLDNLLRGYDNSIRPDFGGPPATIEVDIMVRSMGPISEVDMTYSMDCYFR 161
Query: 265 MNWIDKRLSW 294
+W+DKRL++
Sbjct: 162 QSWVDKRLAF 171
>AE014296-2969|AAF49298.2| 686|Drosophila melanogaster CG7446-PA
protein.
Length = 686
Score = 32.7 bits (71), Expect = 0.63
Identities = 18/70 (25%), Positives = 35/70 (50%), Gaps = 4/70 (5%)
Frame = +1
Query: 97 ECENATSLSLMIDSLLATYDRDSPPD---SKIVVNLTLHLRHAN-IRESESTVRIQADLQ 264
+ N ++S ++D+LL YD PD + + + +R I E + T + +
Sbjct: 102 QSNNHANISELLDNLLRGYDNSIRPDFGGPPATIEVDIMVRSMGPISEVDMTYSMDCYFR 161
Query: 265 MNWIDKRLSW 294
+W+DKRL++
Sbjct: 162 QSWVDKRLAF 171
>U13178-1|AAA86955.1| 404|Drosophila melanogaster RNA binding
protein protein.
Length = 404
Score = 30.7 bits (66), Expect = 2.5
Identities = 15/36 (41%), Positives = 16/36 (44%)
Frame = +2
Query: 716 GGXRVXXAGGXGXTPXGGGLLXXRXXRXGGGXSGGS 823
GG R GG G GGG R GGG GG+
Sbjct: 241 GGGRFDRGGGGGGNGGGGGGRYDRGGGGGGGGGGGN 276
>M15765-1|AAA70425.1| 365|Drosophila melanogaster unknown protein
protein.
Length = 365
Score = 30.7 bits (66), Expect = 2.5
Identities = 15/36 (41%), Positives = 16/36 (44%)
Frame = +2
Query: 716 GGXRVXXAGGXGXTPXGGGLLXXRXXRXGGGXSGGS 823
GG R GG G GGG R GGG GG+
Sbjct: 203 GGGRFDRGGGGGGNGGGGGGRYDRGGGGGGGGGGGN 238
>L37083-1|AAC41563.1| 404|Drosophila melanogaster RNA binding
protein protein.
Length = 404
Score = 30.7 bits (66), Expect = 2.5
Identities = 15/36 (41%), Positives = 16/36 (44%)
Frame = +2
Query: 716 GGXRVXXAGGXGXTPXGGGLLXXRXXRXGGGXSGGS 823
GG R GG G GGG R GGG GG+
Sbjct: 241 GGGRFDRGGGGGGNGGGGGGRYDRGGGGGGGGGGGN 276
>X53583-1|CAA37652.1| 576|Drosophila melanogaster alpha-2-subunit
nicotinic acetylcholinereceptor precursor protein.
Length = 576
Score = 30.3 bits (65), Expect = 3.3
Identities = 28/79 (35%), Positives = 33/79 (41%), Gaps = 5/79 (6%)
Frame = +2
Query: 305 EWGCSTWL-VSSERLWRPDVVLLNAAXTXAGDYASPRPXXXXGLXLXG*SAWTLAXXF-- 475
E+G T L V SE +W PD+VL N A G+Y L G WT F
Sbjct: 112 EYGGVTELYVPSEHIWLPDIVLYNNAD---GEYVVTTMTKAI-LHYTGKVVWTPPAIFKS 167
Query: 476 LCXXD--XWPXDXXTCXFK 526
C D +P D TC K
Sbjct: 168 SCEIDVRYFPFDQQTCFMK 186
>X52274-1|CAA36517.1| 576|Drosophila melanogaster nicotinic
acetylcholine receptoralpha subunit protein.
Length = 576
Score = 30.3 bits (65), Expect = 3.3
Identities = 28/79 (35%), Positives = 33/79 (41%), Gaps = 5/79 (6%)
Frame = +2
Query: 305 EWGCSTWL-VSSERLWRPDVVLLNAAXTXAGDYASPRPXXXXGLXLXG*SAWTLAXXF-- 475
E+G T L V SE +W PD+VL N A G+Y L G WT F
Sbjct: 112 EYGGVTELYVPSEHIWLPDIVLYNNAD---GEYVVTTMTKAI-LHYTGKVVWTPPAIFKS 167
Query: 476 LCXXD--XWPXDXXTCXFK 526
C D +P D TC K
Sbjct: 168 SCEIDVRYFPFDQQTCFMK 186
>AY058446-1|AAL13675.1| 576|Drosophila melanogaster GH22843p
protein.
Length = 576
Score = 30.3 bits (65), Expect = 3.3
Identities = 28/79 (35%), Positives = 33/79 (41%), Gaps = 5/79 (6%)
Frame = +2
Query: 305 EWGCSTWL-VSSERLWRPDVVLLNAAXTXAGDYASPRPXXXXGLXLXG*SAWTLAXXF-- 475
E+G T L V SE +W PD+VL N A G+Y L G WT F
Sbjct: 112 EYGGVTELYVPSEHIWLPDIVLYNNAD---GEYVVTTMTKAI-LHYTGKVVWTPPAIFKS 167
Query: 476 LCXXD--XWPXDXXTCXFK 526
C D +P D TC K
Sbjct: 168 SCEIDVRYFPFDQQTCFMK 186
>AE014297-3556|AAF56303.1| 576|Drosophila melanogaster CG6844-PB,
isoform B protein.
Length = 576
Score = 30.3 bits (65), Expect = 3.3
Identities = 28/79 (35%), Positives = 33/79 (41%), Gaps = 5/79 (6%)
Frame = +2
Query: 305 EWGCSTWL-VSSERLWRPDVVLLNAAXTXAGDYASPRPXXXXGLXLXG*SAWTLAXXF-- 475
E+G T L V SE +W PD+VL N A G+Y L G WT F
Sbjct: 112 EYGGVTELYVPSEHIWLPDIVLYNNAD---GEYVVTTMTKAI-LHYTGKVVWTPPAIFKS 167
Query: 476 LCXXD--XWPXDXXTCXFK 526
C D +P D TC K
Sbjct: 168 SCEIDVRYFPFDQQTCFMK 186
>AE014297-3555|AAF56302.2| 576|Drosophila melanogaster CG6844-PA,
isoform A protein.
Length = 576
Score = 30.3 bits (65), Expect = 3.3
Identities = 28/79 (35%), Positives = 33/79 (41%), Gaps = 5/79 (6%)
Frame = +2
Query: 305 EWGCSTWL-VSSERLWRPDVVLLNAAXTXAGDYASPRPXXXXGLXLXG*SAWTLAXXF-- 475
E+G T L V SE +W PD+VL N A G+Y L G WT F
Sbjct: 112 EYGGVTELYVPSEHIWLPDIVLYNNAD---GEYVVTTMTKAI-LHYTGKVVWTPPAIFKS 167
Query: 476 LCXXD--XWPXDXXTCXFK 526
C D +P D TC K
Sbjct: 168 SCEIDVRYFPFDQQTCFMK 186
>AE013599-399|AAM68891.2| 409|Drosophila melanogaster CG11112-PB,
isoform B protein.
Length = 409
Score = 29.5 bits (63), Expect = 5.8
Identities = 12/26 (46%), Positives = 13/26 (50%)
Frame = -1
Query: 816 PEXPPPXRXXRXXRRPPPXGVXPXPP 739
P PP + R RRPPP P PP
Sbjct: 213 PRPPPFYKPSRPNRRPPPPPPPPPPP 238
>AY119486-1|AAM50140.1| 1049|Drosophila melanogaster GH07742p
protein.
Length = 1049
Score = 29.1 bits (62), Expect = 7.7
Identities = 13/35 (37%), Positives = 13/35 (37%)
Frame = -1
Query: 819 PPEXPPPXRXXRXXRRPPPXGVXPXPPAXXTRXPP 715
PP PPP PPP P PP PP
Sbjct: 477 PPPPPPPLHAFVAPPPPPPPPPPPPPPLANYGAPP 511
>AY089614-1|AAL90352.1| 417|Drosophila melanogaster RE28792p
protein.
Length = 417
Score = 29.1 bits (62), Expect = 7.7
Identities = 12/35 (34%), Positives = 13/35 (37%)
Frame = -1
Query: 819 PPEXPPPXRXXRXXRRPPPXGVXPXPPAXXTRXPP 715
PP PPP +PPP P P PP
Sbjct: 327 PPPMPPPLMPWMSAPQPPPPATEPLNPPIPGTLPP 361
>AY060989-1|AAL28537.1| 222|Drosophila melanogaster GM14833p
protein.
Length = 222
Score = 29.1 bits (62), Expect = 7.7
Identities = 12/35 (34%), Positives = 13/35 (37%)
Frame = -1
Query: 819 PPEXPPPXRXXRXXRRPPPXGVXPXPPAXXTRXPP 715
PP PPP +PPP P P PP
Sbjct: 132 PPPMPPPLMPWMSAPQPPPPATEPLNPPIPGTLPP 166
>AJ243904-1|CAB64937.1| 773|Drosophila melanogaster SF1 protein
protein.
Length = 773
Score = 29.1 bits (62), Expect = 7.7
Identities = 12/35 (34%), Positives = 13/35 (37%)
Frame = -1
Query: 819 PPEXPPPXRXXRXXRRPPPXGVXPXPPAXXTRXPP 715
PP PPP +PPP P P PP
Sbjct: 697 PPPMPPPLMPWMSAPQPPPPATEPLNPPIPGTLPP 731
>AE014297-2366|AAF55430.3| 787|Drosophila melanogaster CG5836-PA
protein.
Length = 787
Score = 29.1 bits (62), Expect = 7.7
Identities = 12/35 (34%), Positives = 13/35 (37%)
Frame = -1
Query: 819 PPEXPPPXRXXRXXRRPPPXGVXPXPPAXXTRXPP 715
PP PPP +PPP P P PP
Sbjct: 697 PPPMPPPLMPWMSAPQPPPPATEPLNPPIPGTLPP 731
>AE014134-691|AAF51054.1| 1059|Drosophila melanogaster CG3399-PA,
isoform A protein.
Length = 1059
Score = 29.1 bits (62), Expect = 7.7
Identities = 13/35 (37%), Positives = 13/35 (37%)
Frame = -1
Query: 819 PPEXPPPXRXXRXXRRPPPXGVXPXPPAXXTRXPP 715
PP PPP PPP P PP PP
Sbjct: 487 PPPPPPPLHAFVAPPPPPPPPPPPPPPLANYGAPP 521
>AE014134-690|AAN10367.1| 1049|Drosophila melanogaster CG3399-PB,
isoform B protein.
Length = 1049
Score = 29.1 bits (62), Expect = 7.7
Identities = 13/35 (37%), Positives = 13/35 (37%)
Frame = -1
Query: 819 PPEXPPPXRXXRXXRRPPPXGVXPXPPAXXTRXPP 715
PP PPP PPP P PP PP
Sbjct: 477 PPPPPPPLHAFVAPPPPPPPPPPPPPPLANYGAPP 511
>AE014134-689|AAF51053.2| 1207|Drosophila melanogaster CG3399-PD,
isoform D protein.
Length = 1207
Score = 29.1 bits (62), Expect = 7.7
Identities = 13/35 (37%), Positives = 13/35 (37%)
Frame = -1
Query: 819 PPEXPPPXRXXRXXRRPPPXGVXPXPPAXXTRXPP 715
PP PPP PPP P PP PP
Sbjct: 635 PPPPPPPLHAFVAPPPPPPPPPPPPPPLANYGAPP 669
>AE014134-688|AAN10366.1| 1154|Drosophila melanogaster CG3399-PC,
isoform C protein.
Length = 1154
Score = 29.1 bits (62), Expect = 7.7
Identities = 13/35 (37%), Positives = 13/35 (37%)
Frame = -1
Query: 819 PPEXPPPXRXXRXXRRPPPXGVXPXPPAXXTRXPP 715
PP PPP PPP P PP PP
Sbjct: 582 PPPPPPPLHAFVAPPPPPPPPPPPPPPLANYGAPP 616
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,433,358
Number of Sequences: 53049
Number of extensions: 611986
Number of successful extensions: 3179
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1780
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2983
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3901127880
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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