Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP11_FL5_D07
(825 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81512-8|CAH19099.1| 509|Caenorhabditis elegans Hypothetical pr... 36 0.027
Z81512-7|CAD54133.1| 504|Caenorhabditis elegans Hypothetical pr... 36 0.027
AL033515-2|CAH19093.1| 509|Caenorhabditis elegans Hypothetical ... 36 0.027
AL033515-1|CAD54179.1| 504|Caenorhabditis elegans Hypothetical ... 36 0.027
AL033511-2|CAH19091.1| 509|Caenorhabditis elegans Hypothetical ... 36 0.027
AL033511-1|CAA22072.2| 504|Caenorhabditis elegans Hypothetical ... 36 0.027
Z67737-1|CAA91536.2| 399|Caenorhabditis elegans Hypothetical pr... 35 0.062
AL110479-15|CAB54361.2| 400|Caenorhabditis elegans Hypothetical... 34 0.14
L23649-2|AAA27911.2| 433|Caenorhabditis elegans Coelomocyte upt... 33 0.19
AY611497-1|AAT42012.1| 433|Caenorhabditis elegans CUP-4 protein. 33 0.19
AF022973-5|AAC25797.4| 479|Caenorhabditis elegans Acetylcholine... 33 0.19
X98600-1|CAA67197.1| 511|Caenorhabditis elegans alpha nicotinic... 33 0.25
X98599-1|CAA67196.1| 511|Caenorhabditis elegans alpha nicotinic... 33 0.25
U88175-2|AAB42282.2| 511|Caenorhabditis elegans Uncoordinated p... 33 0.25
Z67737-5|CAA91541.2| 401|Caenorhabditis elegans Hypothetical pr... 32 0.43
AC006834-2|AAF40009.1| 562|Caenorhabditis elegans Acetylcholine... 32 0.57
Z67737-2|CAA91537.3| 400|Caenorhabditis elegans Hypothetical pr... 31 1.0
AC084197-41|AAG23462.3| 493|Caenorhabditis elegans Ligand-gated... 31 1.0
U93842-1|AAB52421.1| 1409|Caenorhabditis elegans regulator of pr... 31 1.3
U49945-3|AAM51509.1| 1408|Caenorhabditis elegans Aboc, expulsion... 31 1.3
U49945-2|AAC47926.1| 1409|Caenorhabditis elegans Aboc, expulsion... 31 1.3
AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical... 31 1.3
AF047656-7|AAC05108.2| 462|Caenorhabditis elegans Ligand-gated ... 31 1.3
AC024783-1|AAY86294.1| 404|Caenorhabditis elegans Hypothetical ... 31 1.3
Z78540-1|CAB01736.1| 409|Caenorhabditis elegans Hypothetical pr... 30 1.7
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 30 2.3
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 30 2.3
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 30 2.3
Z70205-8|CAO78730.1| 270|Caenorhabditis elegans Hypothetical pr... 29 3.1
Z70205-7|CAA94120.2| 996|Caenorhabditis elegans Hypothetical pr... 29 3.1
Z67737-4|CAA91539.2| 401|Caenorhabditis elegans Hypothetical pr... 29 3.1
AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily a... 29 3.1
AF038614-9|AAB92062.2| 445|Caenorhabditis elegans Hypothetical ... 29 3.1
AB054992-1|BAB62002.1| 996|Caenorhabditis elegans peroxin protein. 29 3.1
Z92837-3|CAB07402.3| 502|Caenorhabditis elegans Hypothetical pr... 29 4.0
U10401-10|AAA19062.2| 476|Caenorhabditis elegans Hypothetical p... 29 4.0
AF016445-13|AAC69055.3| 371|Caenorhabditis elegans Ligand-gated... 29 4.0
Z78417-4|CAB01685.2| 531|Caenorhabditis elegans Hypothetical pr... 29 5.3
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 29 5.3
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 29 5.3
AF016664-8|AAY44018.1| 397|Caenorhabditis elegans Hypothetical ... 29 5.3
AC006631-5|AAF39790.3| 469|Caenorhabditis elegans Acetylcholine... 29 5.3
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 28 7.1
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 28 7.1
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 28 7.1
Z99281-1|CAB16504.2| 439|Caenorhabditis elegans Hypothetical pr... 28 9.3
Z83104-2|CAB54203.1| 563|Caenorhabditis elegans Hypothetical pr... 28 9.3
Z83104-1|CAB54204.1| 573|Caenorhabditis elegans Hypothetical pr... 28 9.3
Z67737-3|CAA91538.2| 399|Caenorhabditis elegans Hypothetical pr... 28 9.3
U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical pr... 28 9.3
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 28 9.3
U39855-1|AAA81080.3| 615|Caenorhabditis elegans Hypothetical pr... 28 9.3
AF047659-10|AAC04430.1| 798|Caenorhabditis elegans Hypothetical... 28 9.3
>Z81512-8|CAH19099.1| 509|Caenorhabditis elegans Hypothetical
protein Y44A6E.1b protein.
Length = 509
Score = 36.3 bits (80), Expect = 0.027
Identities = 17/63 (26%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Frame = +1
Query: 127 MIDSLLATYDRDSPPDSKIVVNLTLHLRHA-NIRESESTVRIQADLQMNWIDKRLSWNAG 303
+ + LL+ ++ ++PPD + V L L H I E + T+ + + +W+D L+W+
Sbjct: 70 LTEYLLSRHNLNAPPDGLLYVEYELELVHILGIDELKQTMTVLIYVDEHWVDPSLTWDPA 129
Query: 304 XVG 312
G
Sbjct: 130 LFG 132
>Z81512-7|CAD54133.1| 504|Caenorhabditis elegans Hypothetical
protein Y44A6E.1a protein.
Length = 504
Score = 36.3 bits (80), Expect = 0.027
Identities = 17/63 (26%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Frame = +1
Query: 127 MIDSLLATYDRDSPPDSKIVVNLTLHLRHA-NIRESESTVRIQADLQMNWIDKRLSWNAG 303
+ + LL+ ++ ++PPD + V L L H I E + T+ + + +W+D L+W+
Sbjct: 70 LTEYLLSRHNLNAPPDGLLYVEYELELVHILGIDELKQTMTVLIYVDEHWVDPSLTWDPA 129
Query: 304 XVG 312
G
Sbjct: 130 LFG 132
>AL033515-2|CAH19093.1| 509|Caenorhabditis elegans Hypothetical
protein Y44A6E.1b protein.
Length = 509
Score = 36.3 bits (80), Expect = 0.027
Identities = 17/63 (26%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Frame = +1
Query: 127 MIDSLLATYDRDSPPDSKIVVNLTLHLRHA-NIRESESTVRIQADLQMNWIDKRLSWNAG 303
+ + LL+ ++ ++PPD + V L L H I E + T+ + + +W+D L+W+
Sbjct: 70 LTEYLLSRHNLNAPPDGLLYVEYELELVHILGIDELKQTMTVLIYVDEHWVDPSLTWDPA 129
Query: 304 XVG 312
G
Sbjct: 130 LFG 132
>AL033515-1|CAD54179.1| 504|Caenorhabditis elegans Hypothetical
protein Y44A6E.1a protein.
Length = 504
Score = 36.3 bits (80), Expect = 0.027
Identities = 17/63 (26%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Frame = +1
Query: 127 MIDSLLATYDRDSPPDSKIVVNLTLHLRHA-NIRESESTVRIQADLQMNWIDKRLSWNAG 303
+ + LL+ ++ ++PPD + V L L H I E + T+ + + +W+D L+W+
Sbjct: 70 LTEYLLSRHNLNAPPDGLLYVEYELELVHILGIDELKQTMTVLIYVDEHWVDPSLTWDPA 129
Query: 304 XVG 312
G
Sbjct: 130 LFG 132
>AL033511-2|CAH19091.1| 509|Caenorhabditis elegans Hypothetical
protein Y44A6E.1b protein.
Length = 509
Score = 36.3 bits (80), Expect = 0.027
Identities = 17/63 (26%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Frame = +1
Query: 127 MIDSLLATYDRDSPPDSKIVVNLTLHLRHA-NIRESESTVRIQADLQMNWIDKRLSWNAG 303
+ + LL+ ++ ++PPD + V L L H I E + T+ + + +W+D L+W+
Sbjct: 70 LTEYLLSRHNLNAPPDGLLYVEYELELVHILGIDELKQTMTVLIYVDEHWVDPSLTWDPA 129
Query: 304 XVG 312
G
Sbjct: 130 LFG 132
>AL033511-1|CAA22072.2| 504|Caenorhabditis elegans Hypothetical
protein Y44A6E.1a protein.
Length = 504
Score = 36.3 bits (80), Expect = 0.027
Identities = 17/63 (26%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Frame = +1
Query: 127 MIDSLLATYDRDSPPDSKIVVNLTLHLRHA-NIRESESTVRIQADLQMNWIDKRLSWNAG 303
+ + LL+ ++ ++PPD + V L L H I E + T+ + + +W+D L+W+
Sbjct: 70 LTEYLLSRHNLNAPPDGLLYVEYELELVHILGIDELKQTMTVLIYVDEHWVDPSLTWDPA 129
Query: 304 XVG 312
G
Sbjct: 130 LFG 132
>Z67737-1|CAA91536.2| 399|Caenorhabditis elegans Hypothetical
protein T01H10.1 protein.
Length = 399
Score = 35.1 bits (77), Expect = 0.062
Identities = 18/50 (36%), Positives = 25/50 (50%)
Frame = +1
Query: 151 YDRDSPPDSKIVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNA 300
YD D+P + L +L+ + E E V + +L W D RLSWNA
Sbjct: 65 YDPDAPQRYNYTLFL-YNLKLIQVNEPEEQVSVVLELMEYWYDPRLSWNA 113
>AL110479-15|CAB54361.2| 400|Caenorhabditis elegans Hypothetical
protein Y105C5B.16 protein.
Length = 400
Score = 33.9 bits (74), Expect = 0.14
Identities = 14/50 (28%), Positives = 26/50 (52%)
Frame = +1
Query: 151 YDRDSPPDSKIVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNA 300
YD ++P + L +L+ ++E + + + ++ W D RLSWNA
Sbjct: 64 YDNEAPKRYNYTIFL-YYLKLVEVQEPQEKISVVMEIMEYWYDARLSWNA 112
>L23649-2|AAA27911.2| 433|Caenorhabditis elegans Coelomocyte uptake
defective protein4 protein.
Length = 433
Score = 33.5 bits (73), Expect = 0.19
Identities = 11/38 (28%), Positives = 22/38 (57%)
Frame = +1
Query: 184 VVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWN 297
+V++ H+ H +I + E T+ + + M W D+ L W+
Sbjct: 74 IVDVHWHIIHVSINQREQTMTVHGHIYMRWFDEFLVWD 111
>AY611497-1|AAT42012.1| 433|Caenorhabditis elegans CUP-4 protein.
Length = 433
Score = 33.5 bits (73), Expect = 0.19
Identities = 11/38 (28%), Positives = 22/38 (57%)
Frame = +1
Query: 184 VVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWN 297
+V++ H+ H +I + E T+ + + M W D+ L W+
Sbjct: 74 IVDVHWHIIHVSINQREQTMTVHGHIYMRWFDEFLVWD 111
>AF022973-5|AAC25797.4| 479|Caenorhabditis elegans Acetylcholine
receptor protein 15 protein.
Length = 479
Score = 33.5 bits (73), Expect = 0.19
Identities = 20/61 (32%), Positives = 34/61 (55%), Gaps = 5/61 (8%)
Frame = +1
Query: 127 MIDSLLATYDRDSPP--DSK--IVVNLTLHLRHA-NIRESESTVRIQADLQMNWIDKRLS 291
+I+ L++ Y R+ P DS +VV+L + L+ N+ E E + + A L+ W D+ L
Sbjct: 25 LINDLMSGYVREERPTLDSSKPVVVSLGVFLQQIINLSEKEEQLEVNAWLKFQWRDENLR 84
Query: 292 W 294
W
Sbjct: 85 W 85
>X98600-1|CAA67197.1| 511|Caenorhabditis elegans alpha nicotinic
acetylcholine receptorsubunit protein.
Length = 511
Score = 33.1 bits (72), Expect = 0.25
Identities = 16/62 (25%), Positives = 31/62 (50%), Gaps = 5/62 (8%)
Frame = +1
Query: 127 MIDSLLATYDR----DSPPDSKIVVNLTLHLRHA-NIRESESTVRIQADLQMNWIDKRLS 291
+ D L+ Y+R + P+ + + L L L ++ E + + L+ WID++LS
Sbjct: 30 LYDDLMVNYNRHRRPSTSPNKPLTIKLKLRLSQIIDVHEIDQIMTCSVWLKQTWIDRKLS 89
Query: 292 WN 297
W+
Sbjct: 90 WD 91
>X98599-1|CAA67196.1| 511|Caenorhabditis elegans alpha nicotinic
acetylcholine receptorsubunit protein.
Length = 511
Score = 33.1 bits (72), Expect = 0.25
Identities = 16/62 (25%), Positives = 31/62 (50%), Gaps = 5/62 (8%)
Frame = +1
Query: 127 MIDSLLATYDR----DSPPDSKIVVNLTLHLRHA-NIRESESTVRIQADLQMNWIDKRLS 291
+ D L+ Y+R + P+ + + L L L ++ E + + L+ WID++LS
Sbjct: 30 LYDDLMVNYNRHRRPSTSPNKPLTIKLKLRLSQIIDVHEIDQIMTCSVWLKQTWIDRKLS 89
Query: 292 WN 297
W+
Sbjct: 90 WD 91
>U88175-2|AAB42282.2| 511|Caenorhabditis elegans Uncoordinated
protein 38 protein.
Length = 511
Score = 33.1 bits (72), Expect = 0.25
Identities = 16/62 (25%), Positives = 31/62 (50%), Gaps = 5/62 (8%)
Frame = +1
Query: 127 MIDSLLATYDR----DSPPDSKIVVNLTLHLRHA-NIRESESTVRIQADLQMNWIDKRLS 291
+ D L+ Y+R + P+ + + L L L ++ E + + L+ WID++LS
Sbjct: 30 LYDDLMVNYNRHRRPSTSPNKPLTIKLKLRLSQIIDVHEIDQIMTCSVWLKQTWIDRKLS 89
Query: 292 WN 297
W+
Sbjct: 90 WD 91
>Z67737-5|CAA91541.2| 401|Caenorhabditis elegans Hypothetical
protein T01H10.6 protein.
Length = 401
Score = 32.3 bits (70), Expect = 0.43
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +1
Query: 193 LTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNA 300
L +L+ ++E E V + +L W D RLSWN+
Sbjct: 79 LLYYLKLVEVQEPEEKVSVVLELVEQWYDPRLSWNS 114
>AC006834-2|AAF40009.1| 562|Caenorhabditis elegans Acetylcholine
receptor protein 6 protein.
Length = 562
Score = 31.9 bits (69), Expect = 0.57
Identities = 13/41 (31%), Positives = 22/41 (53%), Gaps = 3/41 (7%)
Frame = +1
Query: 217 NIRESESTVRIQADLQMNWIDKRLSWNA---GXVGLQHLAG 330
++ E + + ++ L +W+D RLSWN G + L H G
Sbjct: 44 DVHEKDQVITLKGTLIHHWLDYRLSWNPDEFGNITLMHFPG 84
>Z67737-2|CAA91537.3| 400|Caenorhabditis elegans Hypothetical
protein T01H10.2 protein.
Length = 400
Score = 31.1 bits (67), Expect = 1.0
Identities = 16/50 (32%), Positives = 23/50 (46%)
Frame = +1
Query: 151 YDRDSPPDSKIVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNA 300
YD D+P + L L+ + E V + ++ W D RLSWNA
Sbjct: 64 YDPDAPKRYNYSIML-YSLKLVEVNEPAEKVAVVMEIMEYWYDIRLSWNA 112
>AC084197-41|AAG23462.3| 493|Caenorhabditis elegans Ligand-gated
ion channel protein 10 protein.
Length = 493
Score = 31.1 bits (67), Expect = 1.0
Identities = 21/76 (27%), Positives = 35/76 (46%), Gaps = 7/76 (9%)
Frame = +1
Query: 91 AAECENATSL----SLMIDSLLATYDRDSPP--DSKIVVNLTLHLRHA-NIRESESTVRI 249
A CEN +L S +++ + YDR P ++VN+T+ L ++E++
Sbjct: 57 ALNCENFRTLDNETSAILNDIFVGYDRRVLPFVQGPVLVNMTIVLGILIELKENQQLAAY 116
Query: 250 QADLQMNWIDKRLSWN 297
W D RLSW+
Sbjct: 117 VISHTQRWYDGRLSWD 132
>U93842-1|AAB52421.1| 1409|Caenorhabditis elegans regulator of
presynaptic activity protein.
Length = 1409
Score = 30.7 bits (66), Expect = 1.3
Identities = 14/39 (35%), Positives = 14/39 (35%)
Frame = -1
Query: 819 PPEXPPPXRXXRXXRRPPPXGVXPXPPAXXTRXPPXXXR 703
PP PP R PPP G P P PP R
Sbjct: 965 PPPVPPREAPPIPKRNPPPLGAPPKVPEGARAPPPLPPR 1003
>U49945-3|AAM51509.1| 1408|Caenorhabditis elegans Aboc, expulsion
defective protein3, isoform b protein.
Length = 1408
Score = 30.7 bits (66), Expect = 1.3
Identities = 14/39 (35%), Positives = 14/39 (35%)
Frame = -1
Query: 819 PPEXPPPXRXXRXXRRPPPXGVXPXPPAXXTRXPPXXXR 703
PP PP R PPP G P P PP R
Sbjct: 965 PPPVPPREAPPIPKRNPPPLGAPPKVPEGARAPPPLPPR 1003
>U49945-2|AAC47926.1| 1409|Caenorhabditis elegans Aboc, expulsion
defective protein3, isoform a protein.
Length = 1409
Score = 30.7 bits (66), Expect = 1.3
Identities = 14/39 (35%), Positives = 14/39 (35%)
Frame = -1
Query: 819 PPEXPPPXRXXRXXRRPPPXGVXPXPPAXXTRXPPXXXR 703
PP PP R PPP G P P PP R
Sbjct: 965 PPPVPPREAPPIPKRNPPPLGAPPKVPEGARAPPPLPPR 1003
>AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical
protein Y43F8C.20 protein.
Length = 193
Score = 30.7 bits (66), Expect = 1.3
Identities = 13/36 (36%), Positives = 14/36 (38%)
Frame = +1
Query: 712 GGGXSCXSGXGXRXYSXRGGPSXXXXXAXGGWXLGG 819
GGG G G + GGP GGW GG
Sbjct: 26 GGGPGRWGGWGGNRWGGGGGPGGWGNNGGGGWGRGG 61
>AF047656-7|AAC05108.2| 462|Caenorhabditis elegans Ligand-gated ion
channel protein 6 protein.
Length = 462
Score = 30.7 bits (66), Expect = 1.3
Identities = 18/82 (21%), Positives = 38/82 (46%), Gaps = 2/82 (2%)
Frame = +1
Query: 82 IASAAECENATSLSLMIDSLLATYDRD-SPPDSKIVVNLTLH-LRHANIRESESTVRIQA 255
+ + A E + + +L+ TYD D P D +V +T + ++ +++ T++
Sbjct: 17 LTAVAFLETSNTETLLQQLFNQTYDVDMKPSDDLTMVTITPNTFILLSMDQTQETIQYSE 76
Query: 256 DLQMNWIDKRLSWNAGXVGLQH 321
+ + W D L WN V ++
Sbjct: 77 EFLLRWYDPILHWNQSAVSYEN 98
>AC024783-1|AAY86294.1| 404|Caenorhabditis elegans Hypothetical
protein Y45G5AL.2 protein.
Length = 404
Score = 30.7 bits (66), Expect = 1.3
Identities = 15/54 (27%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = +1
Query: 166 PPDSKIVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGXV-GLQHL 324
PP +I + L++ ++ + E E D + +W D RLSW+ G+ H+
Sbjct: 79 PPRFEITIQLSM-MKLVEVVEPEEKATFLFDYRADWYDTRLSWDPEDYGGINHI 131
>Z78540-1|CAB01736.1| 409|Caenorhabditis elegans Hypothetical
protein C33G3.3 protein.
Length = 409
Score = 30.3 bits (65), Expect = 1.7
Identities = 18/67 (26%), Positives = 31/67 (46%), Gaps = 2/67 (2%)
Frame = +1
Query: 103 ENATSLS-LMIDSLLATYDRDSPPDSKIVVNLT-LHLRHANIRESESTVRIQADLQMNWI 276
E+A L+ L I +A+ + + +N L+H + E + I L+++W
Sbjct: 33 ESAKKLAKLNIPHAIASIPPNYLSQQPVTINFAQFTLQHFELNEHLKDISIHGYLELSWH 92
Query: 277 DKRLSWN 297
D RL WN
Sbjct: 93 DDRLMWN 99
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 29.9 bits (64), Expect = 2.3
Identities = 14/31 (45%), Positives = 15/31 (48%)
Frame = -1
Query: 807 PPPXRXXRXXRRPPPXGVXPXPPAXXTRXPP 715
PPP R PPP G P PPA + PP
Sbjct: 264 PPPPRTGSPP--PPPTGSPPPPPAGGSPPPP 292
Score = 28.7 bits (61), Expect = 5.3
Identities = 13/35 (37%), Positives = 13/35 (37%)
Frame = -1
Query: 819 PPEXPPPXRXXRXXRRPPPXGVXPXPPAXXTRXPP 715
PP PPP PPP PPA PP
Sbjct: 297 PPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPP 331
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 29.9 bits (64), Expect = 2.3
Identities = 14/31 (45%), Positives = 15/31 (48%)
Frame = -1
Query: 807 PPPXRXXRXXRRPPPXGVXPXPPAXXTRXPP 715
PPP R PPP G P PPA + PP
Sbjct: 285 PPPPRTGSPP--PPPTGSPPPPPAGGSPPPP 313
Score = 28.7 bits (61), Expect = 5.3
Identities = 13/35 (37%), Positives = 13/35 (37%)
Frame = -1
Query: 819 PPEXPPPXRXXRXXRRPPPXGVXPXPPAXXTRXPP 715
PP PPP PPP PPA PP
Sbjct: 318 PPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPP 352
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 29.9 bits (64), Expect = 2.3
Identities = 14/31 (45%), Positives = 15/31 (48%)
Frame = -1
Query: 807 PPPXRXXRXXRRPPPXGVXPXPPAXXTRXPP 715
PPP R PPP G P PPA + PP
Sbjct: 270 PPPPRTGSPP--PPPTGSPPPPPAGGSPPPP 298
Score = 28.7 bits (61), Expect = 5.3
Identities = 13/35 (37%), Positives = 13/35 (37%)
Frame = -1
Query: 819 PPEXPPPXRXXRXXRRPPPXGVXPXPPAXXTRXPP 715
PP PPP PPP PPA PP
Sbjct: 303 PPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPP 337
>Z70205-8|CAO78730.1| 270|Caenorhabditis elegans Hypothetical
protein C11H1.4b protein.
Length = 270
Score = 29.5 bits (63), Expect = 3.1
Identities = 18/69 (26%), Positives = 30/69 (43%)
Frame = -1
Query: 336 EDTSQVLQPHSPCVPTQSFVDPIHLKICLYSHGGLGLTNVSMSQMQGQVDYDFGVGGGVP 157
E+ V + C P F D + H G+T+ ++Q+ ++D G GV
Sbjct: 82 ENVRLVFEKARSCAPCILFFDELDSLAPKRGHDSTGVTDRVVNQLLTELDGAEGGMKGVI 141
Query: 156 IVRCEERVD 130
I+ C R+D
Sbjct: 142 ILGCTSRID 150
>Z70205-7|CAA94120.2| 996|Caenorhabditis elegans Hypothetical protein
C11H1.4a protein.
Length = 996
Score = 29.5 bits (63), Expect = 3.1
Identities = 18/69 (26%), Positives = 30/69 (43%)
Frame = -1
Query: 336 EDTSQVLQPHSPCVPTQSFVDPIHLKICLYSHGGLGLTNVSMSQMQGQVDYDFGVGGGVP 157
E+ V + C P F D + H G+T+ ++Q+ ++D G GV
Sbjct: 808 ENVRLVFEKARSCAPCILFFDELDSLAPKRGHDSTGVTDRVVNQLLTELDGAEGGMKGVI 867
Query: 156 IVRCEERVD 130
I+ C R+D
Sbjct: 868 ILGCTSRID 876
>Z67737-4|CAA91539.2| 401|Caenorhabditis elegans Hypothetical
protein T01H10.5 protein.
Length = 401
Score = 29.5 bits (63), Expect = 3.1
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = +1
Query: 193 LTLHLRHANIRESESTVRIQADLQMNWIDKRLSWN 297
L +L+ ++E V + +L W D RLSWN
Sbjct: 79 LLYYLKLVEVQEPAEKVSVVLELVERWYDPRLSWN 113
>AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily
assigned gene nameprotein 268 protein.
Length = 881
Score = 29.5 bits (63), Expect = 3.1
Identities = 12/35 (34%), Positives = 14/35 (40%)
Frame = -1
Query: 819 PPEXPPPXRXXRXXRRPPPXGVXPXPPAXXTRXPP 715
PP PPP ++ PP P PP PP
Sbjct: 67 PPPPPPPPPLISILQQAPPPPPPPPPPTLKAPPPP 101
>AF038614-9|AAB92062.2| 445|Caenorhabditis elegans Hypothetical
protein F15E6.2 protein.
Length = 445
Score = 29.5 bits (63), Expect = 3.1
Identities = 16/79 (20%), Positives = 32/79 (40%)
Frame = +1
Query: 88 SAAECENATSLSLMIDSLLATYDRDSPPDSKIVVNLTLHLRHANIRESESTVRIQADLQM 267
S C+ + + TY + +K+V ++ + + I E V++ +
Sbjct: 54 SCHSCQGGDRAWKLRTHIQTTYQNATDNKTKVVRVESVRINNVEIDERRQNVKVFGRFVL 113
Query: 268 NWIDKRLSWNAGXVGLQHL 324
+W D +SW+ GL L
Sbjct: 114 SWNDTMVSWDKEQWGLSWL 132
>AB054992-1|BAB62002.1| 996|Caenorhabditis elegans peroxin protein.
Length = 996
Score = 29.5 bits (63), Expect = 3.1
Identities = 18/69 (26%), Positives = 30/69 (43%)
Frame = -1
Query: 336 EDTSQVLQPHSPCVPTQSFVDPIHLKICLYSHGGLGLTNVSMSQMQGQVDYDFGVGGGVP 157
E+ V + C P F D + H G+T+ ++Q+ ++D G GV
Sbjct: 808 ENVRLVFEKARSCAPCILFFDELDSLAPKRGHDSTGVTDRVVNQLLTELDGAEGGMKGVI 867
Query: 156 IVRCEERVD 130
I+ C R+D
Sbjct: 868 ILGCTSRID 876
>Z92837-3|CAB07402.3| 502|Caenorhabditis elegans Hypothetical
protein R03E1.3 protein.
Length = 502
Score = 29.1 bits (62), Expect = 4.0
Identities = 12/39 (30%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Frame = +1
Query: 187 VNLTLHLRHAN-IRESESTVRIQADLQMNWIDKRLSWNA 300
VN+ L + H + E E T + + WID+ + W+A
Sbjct: 54 VNVFLSIAHVEKVDEHEQTALVHGHIWATWIDEYMQWDA 92
>U10401-10|AAA19062.2| 476|Caenorhabditis elegans Hypothetical
protein T20B12.9 protein.
Length = 476
Score = 29.1 bits (62), Expect = 4.0
Identities = 22/69 (31%), Positives = 35/69 (50%), Gaps = 3/69 (4%)
Frame = +1
Query: 97 ECENATSLSLMIDSLLATYDRDSPPDSKIVVNLTLHLRHANIRE-SESTVRIQADLQMN- 270
E + +L +ID+LL YD P+++ VN+T+ L + SE T D+ +
Sbjct: 9 EFNSRINLGKLIDTLLTDYDTHLLPEAE-GVNVTIELHVQGVSGISEITGDFSLDVMYSE 67
Query: 271 -WIDKRLSW 294
W D RLS+
Sbjct: 68 IWQDPRLSF 76
>AF016445-13|AAC69055.3| 371|Caenorhabditis elegans Ligand-gated
ion channel protein 1 protein.
Length = 371
Score = 29.1 bits (62), Expect = 4.0
Identities = 13/44 (29%), Positives = 23/44 (52%)
Frame = +1
Query: 166 PPDSKIVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWN 297
PP +++ + + + L+ ++ E E V D W D+RL WN
Sbjct: 51 PPITELKLTMAM-LKLVDVVEVEEKVTFLFDYLAEWTDQRLKWN 93
>Z78417-4|CAB01685.2| 531|Caenorhabditis elegans Hypothetical
protein C35C5.5 protein.
Length = 531
Score = 28.7 bits (61), Expect = 5.3
Identities = 17/65 (26%), Positives = 32/65 (49%), Gaps = 5/65 (7%)
Frame = +1
Query: 118 LSLMIDSLLATYDRDSPP----DSKIVVNLTLHL-RHANIRESESTVRIQADLQMNWIDK 282
+S ++++LL Y++ P + V +L R ++ E + L+M W DK
Sbjct: 29 VSQLLENLLTDYNKAVRPVHNASDALKVKFGANLCRLIDVDEVNQVLTTSLWLEMQWYDK 88
Query: 283 RLSWN 297
+L+WN
Sbjct: 89 KLTWN 93
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 28.7 bits (61), Expect = 5.3
Identities = 13/35 (37%), Positives = 13/35 (37%)
Frame = -1
Query: 819 PPEXPPPXRXXRXXRRPPPXGVXPXPPAXXTRXPP 715
P PPP PPP G P PP PP
Sbjct: 285 PRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPP 319
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 28.7 bits (61), Expect = 5.3
Identities = 13/35 (37%), Positives = 13/35 (37%)
Frame = -1
Query: 819 PPEXPPPXRXXRXXRRPPPXGVXPXPPAXXTRXPP 715
P PPP PPP G P PP PP
Sbjct: 295 PRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPP 329
>AF016664-8|AAY44018.1| 397|Caenorhabditis elegans Hypothetical
protein D2062.12 protein.
Length = 397
Score = 28.7 bits (61), Expect = 5.3
Identities = 10/34 (29%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Frame = +1
Query: 199 LHLRHAN-IRESESTVRIQADLQMNWIDKRLSWN 297
LH+ H + I++ + +++ W+D+RL WN
Sbjct: 62 LHVDHIHDIQDEQGVLKMALTFTFTWMDERLMWN 95
>AC006631-5|AAF39790.3| 469|Caenorhabditis elegans Acetylcholine
receptor protein 21 protein.
Length = 469
Score = 28.7 bits (61), Expect = 5.3
Identities = 19/70 (27%), Positives = 29/70 (41%), Gaps = 4/70 (5%)
Frame = +2
Query: 329 VSSERLWRPDVVLLNAAXTXAGDYASPRPXXXXGLXLXG*SAWTLAXXFL--CXXD--XW 496
+ S+++W+PD++L N A Y + G W L+ F C D +
Sbjct: 76 IPSDKIWKPDIILYNNAD---AQYMKSVMSTDVIVDYLGNIHWPLSAIFTSSCPLDVKHY 132
Query: 497 PXDXXTCXFK 526
P D TC K
Sbjct: 133 PFDRQTCILK 142
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 28.3 bits (60), Expect = 7.1
Identities = 15/40 (37%), Positives = 16/40 (40%), Gaps = 2/40 (5%)
Frame = -1
Query: 807 PPPXRXXRXXRRPPPXG--VXPXPPAXXTRXPPXXXRXGG 694
PPP PPP G V P PP T P + GG
Sbjct: 106 PPPPMFGAPPPPPPPSGLGVAPQPPRPKTPVNPALAKLGG 145
Score = 27.9 bits (59), Expect = 9.3
Identities = 13/38 (34%), Positives = 14/38 (36%)
Frame = -1
Query: 807 PPPXRXXRXXRRPPPXGVXPXPPAXXTRXPPXXXRXGG 694
PPP P P G+ P PP PP GG
Sbjct: 66 PPPVPNGFIPPPPGPGGIPPPPPMFAGGIPPPPPMMGG 103
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 28.3 bits (60), Expect = 7.1
Identities = 19/58 (32%), Positives = 21/58 (36%)
Frame = +1
Query: 646 PAPXXPPXQPXAXXXKPPXSXXGGGXSCXSGXGXRXYSXRGGPSXXXXXAXGGWXLGG 819
PA PP P P GGG S S G S GG + GG+ GG
Sbjct: 298 PAAAPPPPPPPPPPPAPAPVSSGGGYSEQSSGGGGGSSYSGG-GEASSSSGGGYSGGG 354
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 28.3 bits (60), Expect = 7.1
Identities = 19/58 (32%), Positives = 21/58 (36%)
Frame = +1
Query: 646 PAPXXPPXQPXAXXXKPPXSXXGGGXSCXSGXGXRXYSXRGGPSXXXXXAXGGWXLGG 819
PA PP P P GGG S S G S GG + GG+ GG
Sbjct: 298 PAAAPPPPPPPPPPPAPAPVSSGGGYSEQSSGGGGGSSYSGG-GEASSSSGGGYSGGG 354
>Z99281-1|CAB16504.2| 439|Caenorhabditis elegans Hypothetical
protein Y57G11C.2 protein.
Length = 439
Score = 27.9 bits (59), Expect = 9.3
Identities = 15/72 (20%), Positives = 33/72 (45%), Gaps = 5/72 (6%)
Frame = +1
Query: 97 ECENATSLSLMIDSLLATYDRDSPPDSK----IVVNLTLHLRHA-NIRESESTVRIQADL 261
E + T + D L+ YD P + +++N++++ + +E T+ ++
Sbjct: 21 EVDGITVAEQLKDVLMEGYDSSIRPVNNERDILIINISMNTMSVLTLDPAEETINFSSEF 80
Query: 262 QMNWIDKRLSWN 297
+ W D+ L WN
Sbjct: 81 ILQWKDEFLFWN 92
>Z83104-2|CAB54203.1| 563|Caenorhabditis elegans Hypothetical
protein F09B12.1b protein.
Length = 563
Score = 27.9 bits (59), Expect = 9.3
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +3
Query: 111 NITVPHDRLAPRNVRSGLPPRLQNRSQPDP 200
N+ P D+L + SG+P +LQNR P P
Sbjct: 114 NVPPPDDQL-DWQIASGVPVQLQNRGVPQP 142
>Z83104-1|CAB54204.1| 573|Caenorhabditis elegans Hypothetical
protein F09B12.1a protein.
Length = 573
Score = 27.9 bits (59), Expect = 9.3
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +3
Query: 111 NITVPHDRLAPRNVRSGLPPRLQNRSQPDP 200
N+ P D+L + SG+P +LQNR P P
Sbjct: 124 NVPPPDDQL-DWQIASGVPVQLQNRGVPQP 152
>Z67737-3|CAA91538.2| 399|Caenorhabditis elegans Hypothetical
protein T01H10.3 protein.
Length = 399
Score = 27.9 bits (59), Expect = 9.3
Identities = 13/49 (26%), Positives = 23/49 (46%)
Frame = +1
Query: 151 YDRDSPPDSKIVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWN 297
+D D+P + L L+ + E + V + ++ W D RL+WN
Sbjct: 65 HDPDAPGRWNYTL-LLFSLKLVEVTEPQEKVSVVMEVMEYWFDARLTWN 112
>U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical
protein C50F7.5 protein.
Length = 309
Score = 27.9 bits (59), Expect = 9.3
Identities = 16/39 (41%), Positives = 17/39 (43%), Gaps = 3/39 (7%)
Frame = -1
Query: 822 EPPEXP-PPXRXXRXXRRPP--PXGVXPXPPAXXTRXPP 715
+PP P PP R PP P P PP TR PP
Sbjct: 242 DPPGPPGPPGPPTRRPPGPPGPPTRRPPGPPGPPTRRPP 280
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 27.9 bits (59), Expect = 9.3
Identities = 13/35 (37%), Positives = 14/35 (40%)
Frame = -1
Query: 819 PPEXPPPXRXXRXXRRPPPXGVXPXPPAXXTRXPP 715
PP PPP + PPP P PP PP
Sbjct: 122 PPPPPPPRKSRAGGSSPPP----PPPPRVPRTPPP 152
Score = 27.9 bits (59), Expect = 9.3
Identities = 13/35 (37%), Positives = 13/35 (37%)
Frame = -1
Query: 819 PPEXPPPXRXXRXXRRPPPXGVXPXPPAXXTRXPP 715
PP PPP R PP P P R PP
Sbjct: 138 PPPPPPPRVPRTPPPRSPPPRRPPMTPPSPQRRPP 172
>U39855-1|AAA81080.3| 615|Caenorhabditis elegans Hypothetical
protein F18G5.4 protein.
Length = 615
Score = 27.9 bits (59), Expect = 9.3
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +1
Query: 226 ESESTVRIQADLQMNWIDKRLSWN 297
E + ++ L +NW+D RLSWN
Sbjct: 154 ERNQALTTRSWLNINWMDPRLSWN 177
>AF047659-10|AAC04430.1| 798|Caenorhabditis elegans Hypothetical
protein K07H8.10 protein.
Length = 798
Score = 27.9 bits (59), Expect = 9.3
Identities = 16/37 (43%), Positives = 16/37 (43%), Gaps = 2/37 (5%)
Frame = +2
Query: 716 GGXRVXXAGGXGXTP--XGGGLLXXRXXRXGGGXSGG 820
GG R GG G TP GGG R GG GG
Sbjct: 12 GGFRGGRGGGSGFTPRGGGGGFRGGDRGRSPGGFRGG 48
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,608,104
Number of Sequences: 27780
Number of extensions: 260840
Number of successful extensions: 1325
Number of sequences better than 10.0: 53
Number of HSP's better than 10.0 without gapping: 884
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1225
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2040452812
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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