Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP11_FL5_D03
         (779 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_05_0686 - 30900748-30902167,30903442-30904742                       30   1.8  
02_01_0458 + 3291563-3291733,3292082-3292769,3292847-3293363,329...    29   4.1  
03_02_0071 + 5425722-5427154,5427259-5427464,5428445-5428686,542...    28   7.2  
11_02_0065 - 7938007-7938393,7939292-7939435,7940597-7940665,794...    28   9.6  
07_01_0080 + 587674-588510                                             28   9.6  
04_03_0660 + 18463011-18463322,18463424-18463516,18464500-184646...    28   9.6  

>02_05_0686 - 30900748-30902167,30903442-30904742
          Length = 906

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 13/31 (41%), Positives = 13/31 (41%)
 Frame = -1

Query: 560 PPPPPXXXXXXXXPPXPPXFIXGGXXXXXPK 468
           PPPPP        PP PP    GG     PK
Sbjct: 353 PPPPPPPKGPSPPPPPPPGGKKGGPPPPPPK 383


>02_01_0458 +
           3291563-3291733,3292082-3292769,3292847-3293363,
           3293438-3293637,3294137-3294372,3294469-3295302
          Length = 881

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 12/31 (38%), Positives = 12/31 (38%)
 Frame = -1

Query: 560 PPPPPXXXXXXXXPPXPPXFIXGGXXXXXPK 468
           PPPPP        PP PP    G      PK
Sbjct: 361 PPPPPPPPPPPRPPPPPPPIKKGAPPPAPPK 391


>03_02_0071 +
           5425722-5427154,5427259-5427464,5428445-5428686,
           5428788-5429570
          Length = 887

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 10/18 (55%), Positives = 10/18 (55%)
 Frame = -3

Query: 561 PPPPPXXXXXXKXPPXPP 508
           PPPPP      K PP PP
Sbjct: 361 PPPPPKLNTAPKPPPPPP 378


>11_02_0065 -
           7938007-7938393,7939292-7939435,7940597-7940665,
           7940762-7940809,7941488-7941584,7941688-7941767,
           7941841-7941912,7942256-7942350,7943903-7943984,
           7945176-7945209,7945255-7945262,7945657-7946058
          Length = 505

 Score = 27.9 bits (59), Expect = 9.6
 Identities = 10/20 (50%), Positives = 10/20 (50%)
 Frame = -1

Query: 560 PPPPPXXXXXXXXPPXPPXF 501
           PPPPP        PP PP F
Sbjct: 67  PPPPPAAFFAAVPPPPPPPF 86


>07_01_0080 + 587674-588510
          Length = 278

 Score = 27.9 bits (59), Expect = 9.6
 Identities = 10/20 (50%), Positives = 10/20 (50%)
 Frame = -3

Query: 561 PPPPPXXXXXXKXPPXPPXF 502
           PPPPP        PP PP F
Sbjct: 104 PPPPPPPPPPPPPPPPPPLF 123



 Score = 27.9 bits (59), Expect = 9.6
 Identities = 10/20 (50%), Positives = 10/20 (50%)
 Frame = -1

Query: 560 PPPPPXXXXXXXXPPXPPXF 501
           PPPPP        PP PP F
Sbjct: 104 PPPPPPPPPPPPPPPPPPLF 123


>04_03_0660 +
           18463011-18463322,18463424-18463516,18464500-18464607,
           18464892-18465044,18465256-18465354,18465443-18465571,
           18465987-18466166,18466208-18466246,18466247-18466363,
           18466445-18466609
          Length = 464

 Score = 27.9 bits (59), Expect = 9.6
 Identities = 11/24 (45%), Positives = 11/24 (45%)
 Frame = -1

Query: 560 PPPPPXXXXXXXXPPXPPXFIXGG 489
           PPPPP        PP PP    GG
Sbjct: 52  PPPPPPPPTQPAPPPPPPARSGGG 75


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,839,956
Number of Sequences: 37544
Number of extensions: 306090
Number of successful extensions: 1873
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 579
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1361
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2091906552
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)