Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP11_FL5_D02
(857 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Y16281-1|CAA76154.1| 529|Homo sapiens nicotinic acetylcholine r... 34 0.76
U62431-1|AAB40109.1| 529|Homo sapiens nicotinic acetylcholine r... 34 0.76
Y08418-1|CAA69695.1| 503|Homo sapiens nicotinic acetylcholine r... 32 3.1
Y08417-1|CAA69694.1| 458|Homo sapiens nicotinic acetylcholine r... 32 3.1
X67513-1|CAA47851.1| 423|Homo sapiens nicotinic acetylcholine ... 32 3.1
X53559-1|CAA37625.1| 474|Homo sapiens neuronal nicotinic acetyl... 32 3.1
U62438-1|AAB40116.1| 458|Homo sapiens nicotinic acetylcholine r... 32 3.1
U62432-1|AAB40110.1| 504|Homo sapiens nicotinic acetylcholine r... 32 3.1
M86383-1|AAC84176.1| 502|Homo sapiens nicotinic acetylcholine r... 32 3.1
M37981-1|AAA59942.1| 503|Homo sapiens neuronal nicotinic acetyl... 32 3.1
BT006897-1|AAP35543.1| 505|Homo sapiens cholinergic receptor, n... 32 3.1
BT006646-1|AAP35292.1| 489|Homo sapiens cholinergic receptor, n... 32 3.1
BC098443-1|AAH98443.1| 504|Homo sapiens cholinergic receptor, n... 32 3.1
BC069788-1|AAH69788.1| 458|Homo sapiens cholinergic receptor, n... 32 3.1
BC069703-1|AAH69703.1| 458|Homo sapiens cholinergic receptor, n... 32 3.1
BC069681-1|AAH69681.1| 458|Homo sapiens cholinergic receptor, n... 32 3.1
BC006114-1|AAH06114.1| 489|Homo sapiens CHRNA3 protein protein. 32 3.1
BC002996-1|AAH02996.1| 505|Homo sapiens cholinergic receptor, n... 32 3.1
BC001642-1|AAH01642.1| 505|Homo sapiens cholinergic receptor, n... 32 3.1
BC000513-1|AAH00513.1| 505|Homo sapiens cholinergic receptor, n... 32 3.1
AJ007783-1|CAA07682.1| 504|Homo sapiens nicotinic acetylcholine... 32 3.1
AF385584-1|AAK68110.1| 489|Homo sapiens nicotinic cholinergic r... 32 3.1
AF140765-1|AAD33063.1| 458|Homo sapiens neuronal acetylcholine ... 32 3.1
Y08421-1|CAA69698.1| 627|Homo sapiens nicotinic acetylcholine r... 31 4.1
X89741-1|CAA61893.1| 627|Homo sapiens neuronal acetylcholine re... 31 4.1
X87629-1|CAA60959.1| 602|Homo sapiens nicotinic acetylcholine r... 31 4.1
U62433-1|AAB40111.1| 627|Homo sapiens nicotinic acetylcholine r... 31 4.1
L35901-1|AAA64743.1| 627|Homo sapiens nicotinic acetylcholine r... 31 4.1
DQ093071-1|AAY88737.1| 627|Homo sapiens cholinergic receptor, n... 31 4.1
BC096290-1|AAH96290.1| 627|Homo sapiens cholinergic receptor, n... 31 4.1
BC095481-1|AAH95481.1| 591|Homo sapiens enabled homolog (Drosop... 31 4.1
BC065238-1|AAH65238.1| 527|Homo sapiens ENAH protein protein. 31 4.1
AY345143-1|AAR04685.1| 570|Homo sapiens MENA protein. 31 4.1
AL591380-2|CAH71476.1| 570|Homo sapiens enabled homolog (Drosop... 31 4.1
AL591380-1|CAH71475.1| 817|Homo sapiens enabled homolog (Drosop... 31 4.1
AL356216-3|CAI22019.1| 570|Homo sapiens enabled homolog (Drosop... 31 4.1
AL356216-2|CAI22020.1| 817|Homo sapiens enabled homolog (Drosop... 31 4.1
AK096246-1|BAC04736.1| 467|Homo sapiens protein ( Homo sapiens ... 31 4.1
AF519769-1|AAQ08487.1| 591|Homo sapiens mena protein protein. 31 4.1
Y00762-1|CAA68731.1| 457|Homo sapiens protein ( Human mRNA for ... 30 9.4
X02502-1|CAA26344.1| 457|Homo sapiens acetylcholine receptor pr... 30 9.4
X01715-1|CAA25861.1| 520|Homo sapiens acetylcholine receptor ga... 30 9.4
S77094-1|AAD14247.1| 457|Homo sapiens nicotinic acetylcholine r... 30 9.4
BC111802-1|AAI11803.1| 465|Homo sapiens CHRNG protein protein. 30 9.4
BC006314-1|AAH06314.1| 269|Homo sapiens CHRNA1 protein protein. 30 9.4
AJ306454-1|CAC34819.1| 497|Homo sapiens neuronal nicotinic acet... 30 9.4
AC092165-3|AAY24103.1| 520|Homo sapiens unknown protein. 30 9.4
AC018890-1|AAY14687.1| 457|Homo sapiens unknown protein. 30 9.4
>Y16281-1|CAA76154.1| 529|Homo sapiens nicotinic acetylcholine
receptor alpha2 subunit precursor protein.
Length = 529
Score = 33.9 bits (74), Expect = 0.76
Identities = 20/69 (28%), Positives = 30/69 (43%), Gaps = 1/69 (1%)
Frame = +3
Query: 342 VSSERLWRPDVVLL-NAAATTAGDYALRARVSNTGSXXWIXRLXISTXISMQXXXXPTDM 518
V SE +W PD+VL NA A + +A + +TG+ W+ + S+ P D
Sbjct: 135 VPSEMIWIPDIVLYNNADGEFAVTHMTKAHLFSTGTVHWVPPAIYKSSCSIDVTFFPFDQ 194
Query: 519 XTGXSXSGS 545
GS
Sbjct: 195 QNCKMKFGS 203
>U62431-1|AAB40109.1| 529|Homo sapiens nicotinic acetylcholine
receptor alpha2 subunit precursor protein.
Length = 529
Score = 33.9 bits (74), Expect = 0.76
Identities = 20/69 (28%), Positives = 30/69 (43%), Gaps = 1/69 (1%)
Frame = +3
Query: 342 VSSERLWRPDVVLL-NAAATTAGDYALRARVSNTGSXXWIXRLXISTXISMQXXXXPTDM 518
V SE +W PD+VL NA A + +A + +TG+ W+ + S+ P D
Sbjct: 135 VPSEMIWIPDIVLYNNADGEFAVTHMTKAHLFSTGTVHWVPPAIYKSSCSIDVTFFPFDQ 194
Query: 519 XTGXSXSGS 545
GS
Sbjct: 195 QNCKMKFGS 203
>Y08418-1|CAA69695.1| 503|Homo sapiens nicotinic acetylcholine
receptor alpha3 subunit precursor protein.
Length = 503
Score = 31.9 bits (69), Expect = 3.1
Identities = 17/65 (26%), Positives = 27/65 (41%), Gaps = 1/65 (1%)
Frame = +3
Query: 324 GCSTWLVSSERLWRPDVVLL-NAAATTAGDYALRARVSNTGSXXWIXRLXISTXISMQXX 500
G V ++++W+PD+VL NA D +A + TG WI + +
Sbjct: 103 GAEFMRVPAQKIWKPDIVLYNNAVGDFQVDDKTKALLKYTGEVTWIPPAIFKSSCKIDVT 162
Query: 501 XXPTD 515
P D
Sbjct: 163 YFPFD 167
>Y08417-1|CAA69694.1| 458|Homo sapiens nicotinic acetylcholine
receptor beta3 subunit precursor protein.
Length = 458
Score = 31.9 bits (69), Expect = 3.1
Identities = 18/59 (30%), Positives = 24/59 (40%), Gaps = 1/59 (1%)
Frame = +3
Query: 342 VSSERLWRPDVVLL-NAAATTAGDYALRARVSNTGSXXWIXRLXISTXISMQXXXXPTD 515
V SE LW PD+VL NA G + V + G+ W + +M P D
Sbjct: 105 VPSESLWLPDIVLFENADGRFEGSLMTKVIVKSNGTVVWTPPASYKSSCTMDVTFFPFD 163
>X67513-1|CAA47851.1| 423|Homo sapiens nicotinic acetylcholine
receptor beta-3 subunit protein.
Length = 423
Score = 31.9 bits (69), Expect = 3.1
Identities = 18/59 (30%), Positives = 24/59 (40%), Gaps = 1/59 (1%)
Frame = +3
Query: 342 VSSERLWRPDVVLL-NAAATTAGDYALRARVSNTGSXXWIXRLXISTXISMQXXXXPTD 515
V SE LW PD+VL NA G + V + G+ W + +M P D
Sbjct: 70 VPSESLWLPDIVLFENADGRFEGSLMTKVIVKSNGTVVWTPPASYKSSCTMDVTFFPFD 128
>X53559-1|CAA37625.1| 474|Homo sapiens neuronal nicotinic
acetylcholine receptor alpha-3merase protein.
Length = 474
Score = 31.9 bits (69), Expect = 3.1
Identities = 17/65 (26%), Positives = 27/65 (41%), Gaps = 1/65 (1%)
Frame = +3
Query: 324 GCSTWLVSSERLWRPDVVLL-NAAATTAGDYALRARVSNTGSXXWIXRLXISTXISMQXX 500
G V ++++W+PD+VL NA D +A + TG WI + +
Sbjct: 74 GAEFMRVPAQKIWKPDIVLYNNAVGDFQVDDKTKALLKYTGEVTWIPPAIFKSSCKIDVT 133
Query: 501 XXPTD 515
P D
Sbjct: 134 YFPFD 138
>U62438-1|AAB40116.1| 458|Homo sapiens nicotinic acetylcholine
receptor beta3 subunit precursor protein.
Length = 458
Score = 31.9 bits (69), Expect = 3.1
Identities = 18/59 (30%), Positives = 24/59 (40%), Gaps = 1/59 (1%)
Frame = +3
Query: 342 VSSERLWRPDVVLL-NAAATTAGDYALRARVSNTGSXXWIXRLXISTXISMQXXXXPTD 515
V SE LW PD+VL NA G + V + G+ W + +M P D
Sbjct: 105 VPSESLWLPDIVLFENADGRFEGSLMTKVIVKSNGTVVWTPPASYKSSCTMDVTFFPFD 163
>U62432-1|AAB40110.1| 504|Homo sapiens nicotinic acetylcholine
receptor alpha3 subunit precursor protein.
Length = 504
Score = 31.9 bits (69), Expect = 3.1
Identities = 17/65 (26%), Positives = 27/65 (41%), Gaps = 1/65 (1%)
Frame = +3
Query: 324 GCSTWLVSSERLWRPDVVLL-NAAATTAGDYALRARVSNTGSXXWIXRLXISTXISMQXX 500
G V ++++W+PD+VL NA D +A + TG WI + +
Sbjct: 104 GAEFMRVPAQKIWKPDIVLYNNAVGDFQVDDKTKALLKYTGEVTWIPPAIFKSSCKIDVT 163
Query: 501 XXPTD 515
P D
Sbjct: 164 YFPFD 168
>M86383-1|AAC84176.1| 502|Homo sapiens nicotinic acetylcholine
receptor alpha 3 subunit precursor protein.
Length = 502
Score = 31.9 bits (69), Expect = 3.1
Identities = 19/71 (26%), Positives = 31/71 (43%), Gaps = 4/71 (5%)
Frame = +3
Query: 315 GEWGCSTWLVSSERLWRPDVVLLNAAATTAGDYAL----RARVSNTGSXXWIXRLXISTX 482
G G V ++++W+PD+VL N A GD+ + +A + TG WI +
Sbjct: 99 GYGGAEFMRVPAQKIWKPDIVLYNNA---VGDFQVTTKTKALLKYTGEVTWIPPAIFKSS 155
Query: 483 ISMQXXXXPTD 515
+ P D
Sbjct: 156 CKIDVTYFPFD 166
>M37981-1|AAA59942.1| 503|Homo sapiens neuronal nicotinic
acetylcholine receptor protein.
Length = 503
Score = 31.9 bits (69), Expect = 3.1
Identities = 17/65 (26%), Positives = 27/65 (41%), Gaps = 1/65 (1%)
Frame = +3
Query: 324 GCSTWLVSSERLWRPDVVLL-NAAATTAGDYALRARVSNTGSXXWIXRLXISTXISMQXX 500
G V ++++W+PD+VL NA D +A + TG WI + +
Sbjct: 103 GAEFMRVPAQKIWKPDIVLYNNAVGDFQVDDKTKALLKYTGEVTWIPPAIFKSSCKIDVT 162
Query: 501 XXPTD 515
P D
Sbjct: 163 YFPFD 167
>BT006897-1|AAP35543.1| 505|Homo sapiens cholinergic receptor,
nicotinic, alpha polypeptide 3 protein.
Length = 505
Score = 31.9 bits (69), Expect = 3.1
Identities = 17/65 (26%), Positives = 27/65 (41%), Gaps = 1/65 (1%)
Frame = +3
Query: 324 GCSTWLVSSERLWRPDVVLL-NAAATTAGDYALRARVSNTGSXXWIXRLXISTXISMQXX 500
G V ++++W+PD+VL NA D +A + TG WI + +
Sbjct: 105 GAEFMRVPAQKIWKPDIVLYNNAVGDFQVDDKTKALLKYTGEVTWIPPAIFKSSCKIDVT 164
Query: 501 XXPTD 515
P D
Sbjct: 165 YFPFD 169
>BT006646-1|AAP35292.1| 489|Homo sapiens cholinergic receptor,
nicotinic, alpha polypeptide 3 protein.
Length = 489
Score = 31.9 bits (69), Expect = 3.1
Identities = 17/65 (26%), Positives = 27/65 (41%), Gaps = 1/65 (1%)
Frame = +3
Query: 324 GCSTWLVSSERLWRPDVVLL-NAAATTAGDYALRARVSNTGSXXWIXRLXISTXISMQXX 500
G V ++++W+PD+VL NA D +A + TG WI + +
Sbjct: 105 GAEFMRVPAQKIWKPDIVLYNNAVGDFQVDDKTKALLKYTGEVTWIPPAIFKSSCKIDVT 164
Query: 501 XXPTD 515
P D
Sbjct: 165 YFPFD 169
>BC098443-1|AAH98443.1| 504|Homo sapiens cholinergic receptor,
nicotinic, alpha 3 protein.
Length = 504
Score = 31.9 bits (69), Expect = 3.1
Identities = 17/65 (26%), Positives = 27/65 (41%), Gaps = 1/65 (1%)
Frame = +3
Query: 324 GCSTWLVSSERLWRPDVVLL-NAAATTAGDYALRARVSNTGSXXWIXRLXISTXISMQXX 500
G V ++++W+PD+VL NA D +A + TG WI + +
Sbjct: 104 GAEFMRVPAQKIWKPDIVLYNNAVGDFQVDDKTKALLKYTGEVTWIPPAIFKSSCKIDVT 163
Query: 501 XXPTD 515
P D
Sbjct: 164 YFPFD 168
>BC069788-1|AAH69788.1| 458|Homo sapiens cholinergic receptor,
nicotinic, beta 3 protein.
Length = 458
Score = 31.9 bits (69), Expect = 3.1
Identities = 18/59 (30%), Positives = 24/59 (40%), Gaps = 1/59 (1%)
Frame = +3
Query: 342 VSSERLWRPDVVLL-NAAATTAGDYALRARVSNTGSXXWIXRLXISTXISMQXXXXPTD 515
V SE LW PD+VL NA G + V + G+ W + +M P D
Sbjct: 105 VPSESLWLPDIVLFENADGRFEGSLMTKVIVKSNGTVVWTPPASYKSSCTMDVTFFPFD 163
>BC069703-1|AAH69703.1| 458|Homo sapiens cholinergic receptor,
nicotinic, beta 3 protein.
Length = 458
Score = 31.9 bits (69), Expect = 3.1
Identities = 18/59 (30%), Positives = 24/59 (40%), Gaps = 1/59 (1%)
Frame = +3
Query: 342 VSSERLWRPDVVLL-NAAATTAGDYALRARVSNTGSXXWIXRLXISTXISMQXXXXPTD 515
V SE LW PD+VL NA G + V + G+ W + +M P D
Sbjct: 105 VPSESLWLPDIVLFENADGRFEGSLMTKVIVKSNGTVVWTPPASYKSSCTMDVTFFPFD 163
>BC069681-1|AAH69681.1| 458|Homo sapiens cholinergic receptor,
nicotinic, beta 3 protein.
Length = 458
Score = 31.9 bits (69), Expect = 3.1
Identities = 18/59 (30%), Positives = 24/59 (40%), Gaps = 1/59 (1%)
Frame = +3
Query: 342 VSSERLWRPDVVLL-NAAATTAGDYALRARVSNTGSXXWIXRLXISTXISMQXXXXPTD 515
V SE LW PD+VL NA G + V + G+ W + +M P D
Sbjct: 105 VPSESLWLPDIVLFENADGRFEGSLMTKVIVKSNGTVVWTPPASYKSSCTMDVTFFPFD 163
>BC006114-1|AAH06114.1| 489|Homo sapiens CHRNA3 protein protein.
Length = 489
Score = 31.9 bits (69), Expect = 3.1
Identities = 17/65 (26%), Positives = 27/65 (41%), Gaps = 1/65 (1%)
Frame = +3
Query: 324 GCSTWLVSSERLWRPDVVLL-NAAATTAGDYALRARVSNTGSXXWIXRLXISTXISMQXX 500
G V ++++W+PD+VL NA D +A + TG WI + +
Sbjct: 105 GAEFMRVPAQKIWKPDIVLYNNAVGDFQVDDKTKALLKYTGEVTWIPPAIFKSSCKIDVT 164
Query: 501 XXPTD 515
P D
Sbjct: 165 YFPFD 169
>BC002996-1|AAH02996.1| 505|Homo sapiens cholinergic receptor,
nicotinic, alpha 3 protein.
Length = 505
Score = 31.9 bits (69), Expect = 3.1
Identities = 17/65 (26%), Positives = 27/65 (41%), Gaps = 1/65 (1%)
Frame = +3
Query: 324 GCSTWLVSSERLWRPDVVLL-NAAATTAGDYALRARVSNTGSXXWIXRLXISTXISMQXX 500
G V ++++W+PD+VL NA D +A + TG WI + +
Sbjct: 105 GAEFMRVPAQKIWKPDIVLYNNAVGDFQVDDKTKALLKYTGEVTWIPPAIFKSSCKIDVT 164
Query: 501 XXPTD 515
P D
Sbjct: 165 YFPFD 169
>BC001642-1|AAH01642.1| 505|Homo sapiens cholinergic receptor,
nicotinic, alpha 3 protein.
Length = 505
Score = 31.9 bits (69), Expect = 3.1
Identities = 17/65 (26%), Positives = 27/65 (41%), Gaps = 1/65 (1%)
Frame = +3
Query: 324 GCSTWLVSSERLWRPDVVLL-NAAATTAGDYALRARVSNTGSXXWIXRLXISTXISMQXX 500
G V ++++W+PD+VL NA D +A + TG WI + +
Sbjct: 105 GAEFMRVPAQKIWKPDIVLYNNAVGDFQVDDKTKALLKYTGEVTWIPPAIFKSSCKIDVT 164
Query: 501 XXPTD 515
P D
Sbjct: 165 YFPFD 169
>BC000513-1|AAH00513.1| 505|Homo sapiens cholinergic receptor,
nicotinic, alpha 3 protein.
Length = 505
Score = 31.9 bits (69), Expect = 3.1
Identities = 17/65 (26%), Positives = 27/65 (41%), Gaps = 1/65 (1%)
Frame = +3
Query: 324 GCSTWLVSSERLWRPDVVLL-NAAATTAGDYALRARVSNTGSXXWIXRLXISTXISMQXX 500
G V ++++W+PD+VL NA D +A + TG WI + +
Sbjct: 105 GAEFMRVPAQKIWKPDIVLYNNAVGDFQVDDKTKALLKYTGEVTWIPPAIFKSSCKIDVT 164
Query: 501 XXPTD 515
P D
Sbjct: 165 YFPFD 169
>AJ007783-1|CAA07682.1| 504|Homo sapiens nicotinic acetylcholine
receptor alpha-3 subunit protein.
Length = 504
Score = 31.9 bits (69), Expect = 3.1
Identities = 17/65 (26%), Positives = 27/65 (41%), Gaps = 1/65 (1%)
Frame = +3
Query: 324 GCSTWLVSSERLWRPDVVLL-NAAATTAGDYALRARVSNTGSXXWIXRLXISTXISMQXX 500
G V ++++W+PD+VL NA D +A + TG WI + +
Sbjct: 104 GAEFMRVPAQKIWKPDIVLYNNAVGDFQVDDKTKALLKYTGEVTWIPPAIFKSSCKIDVT 163
Query: 501 XXPTD 515
P D
Sbjct: 164 YFPFD 168
>AF385584-1|AAK68110.1| 489|Homo sapiens nicotinic cholinergic
receptor alpha 3 protein.
Length = 489
Score = 31.9 bits (69), Expect = 3.1
Identities = 17/65 (26%), Positives = 27/65 (41%), Gaps = 1/65 (1%)
Frame = +3
Query: 324 GCSTWLVSSERLWRPDVVLL-NAAATTAGDYALRARVSNTGSXXWIXRLXISTXISMQXX 500
G V ++++W+PD+VL NA D +A + TG WI + +
Sbjct: 99 GAEFMRVPAQKIWKPDIVLYNNAVGDFQVDDKTKALLKYTGEVTWIPPAIFKSSCKIDVT 158
Query: 501 XXPTD 515
P D
Sbjct: 159 YFPFD 163
>AF140765-1|AAD33063.1| 458|Homo sapiens neuronal acetylcholine
receptor beta-3 subunit precursor protein.
Length = 458
Score = 31.9 bits (69), Expect = 3.1
Identities = 18/59 (30%), Positives = 24/59 (40%), Gaps = 1/59 (1%)
Frame = +3
Query: 342 VSSERLWRPDVVLL-NAAATTAGDYALRARVSNTGSXXWIXRLXISTXISMQXXXXPTD 515
V SE LW PD+VL NA G + V + G+ W + +M P D
Sbjct: 105 VPSESLWLPDIVLFENADGRFEGSLMTKVIVKSNGTVVWTPPASYKSSCTMDVTFFPFD 163
>Y08421-1|CAA69698.1| 627|Homo sapiens nicotinic acetylcholine
receptor alpha4 subunit precursor protein.
Length = 627
Score = 31.5 bits (68), Expect = 4.1
Identities = 19/69 (27%), Positives = 28/69 (40%), Gaps = 1/69 (1%)
Frame = +3
Query: 342 VSSERLWRPDVVLL-NAAATTAGDYALRARVSNTGSXXWIXRLXISTXISMQXXXXPTDM 518
+ SE +WRPD+VL NA A + +A + + G W + S+ P D
Sbjct: 113 IPSELIWRPDIVLYNNADGDFAVTHLTKAHLFHDGRVQWTPPAIYKSSCSIDVTFFPFDQ 172
Query: 519 XTGXSXSGS 545
GS
Sbjct: 173 QNCTMKFGS 181
>X89741-1|CAA61893.1| 627|Homo sapiens neuronal acetylcholine
receptor alpha-4 subunit protein.
Length = 627
Score = 31.5 bits (68), Expect = 4.1
Identities = 19/69 (27%), Positives = 28/69 (40%), Gaps = 1/69 (1%)
Frame = +3
Query: 342 VSSERLWRPDVVLL-NAAATTAGDYALRARVSNTGSXXWIXRLXISTXISMQXXXXPTDM 518
+ SE +WRPD+VL NA A + +A + + G W + S+ P D
Sbjct: 113 IPSELIWRPDIVLYNNADGDFAVTHLTKAHLFHDGRVQWTPPAIYKSSCSIDVTFFPFDQ 172
Query: 519 XTGXSXSGS 545
GS
Sbjct: 173 QNCTMKFGS 181
>X87629-1|CAA60959.1| 602|Homo sapiens nicotinic acetylcholine
receptor protein.
Length = 602
Score = 31.5 bits (68), Expect = 4.1
Identities = 19/69 (27%), Positives = 28/69 (40%), Gaps = 1/69 (1%)
Frame = +3
Query: 342 VSSERLWRPDVVLL-NAAATTAGDYALRARVSNTGSXXWIXRLXISTXISMQXXXXPTDM 518
+ SE +WRPD+VL NA A + +A + + G W + S+ P D
Sbjct: 88 IPSELIWRPDIVLYNNADGDFAVTHLTKAHLFHDGRVQWTPPAIYKSSCSIDVTFFPFDQ 147
Query: 519 XTGXSXSGS 545
GS
Sbjct: 148 QNCTMKFGS 156
>U62433-1|AAB40111.1| 627|Homo sapiens nicotinic acetylcholine
receptor alpha4 subunit precursor protein.
Length = 627
Score = 31.5 bits (68), Expect = 4.1
Identities = 19/69 (27%), Positives = 28/69 (40%), Gaps = 1/69 (1%)
Frame = +3
Query: 342 VSSERLWRPDVVLL-NAAATTAGDYALRARVSNTGSXXWIXRLXISTXISMQXXXXPTDM 518
+ SE +WRPD+VL NA A + +A + + G W + S+ P D
Sbjct: 113 IPSELIWRPDIVLYNNADGDFAVTHLTKAHLFHDGRVQWTPPAIYKSSCSIDVTFFPFDQ 172
Query: 519 XTGXSXSGS 545
GS
Sbjct: 173 QNCTMKFGS 181
>L35901-1|AAA64743.1| 627|Homo sapiens nicotinic acetylcholine
receptor alpha 4 subunit protein.
Length = 627
Score = 31.5 bits (68), Expect = 4.1
Identities = 19/69 (27%), Positives = 28/69 (40%), Gaps = 1/69 (1%)
Frame = +3
Query: 342 VSSERLWRPDVVLL-NAAATTAGDYALRARVSNTGSXXWIXRLXISTXISMQXXXXPTDM 518
+ SE +WRPD+VL NA A + +A + + G W + S+ P D
Sbjct: 113 IPSELIWRPDIVLYNNADGDFAVTHLTKAHLFHDGRVQWTPPAIYKSSCSIDVTFFPFDQ 172
Query: 519 XTGXSXSGS 545
GS
Sbjct: 173 QNCTMKFGS 181
>DQ093071-1|AAY88737.1| 627|Homo sapiens cholinergic receptor,
nicotinic, alpha polypeptide 4 protein.
Length = 627
Score = 31.5 bits (68), Expect = 4.1
Identities = 19/69 (27%), Positives = 28/69 (40%), Gaps = 1/69 (1%)
Frame = +3
Query: 342 VSSERLWRPDVVLL-NAAATTAGDYALRARVSNTGSXXWIXRLXISTXISMQXXXXPTDM 518
+ SE +WRPD+VL NA A + +A + + G W + S+ P D
Sbjct: 113 IPSELIWRPDIVLYNNADGDFAVTHLTKAHLFHDGRVQWTPPAIYKSSCSIDVTFFPFDQ 172
Query: 519 XTGXSXSGS 545
GS
Sbjct: 173 QNCTMKFGS 181
>BC096290-1|AAH96290.1| 627|Homo sapiens cholinergic receptor,
nicotinic, alpha 4 protein.
Length = 627
Score = 31.5 bits (68), Expect = 4.1
Identities = 19/69 (27%), Positives = 28/69 (40%), Gaps = 1/69 (1%)
Frame = +3
Query: 342 VSSERLWRPDVVLL-NAAATTAGDYALRARVSNTGSXXWIXRLXISTXISMQXXXXPTDM 518
+ SE +WRPD+VL NA A + +A + + G W + S+ P D
Sbjct: 113 IPSELIWRPDIVLYNNADGDFAVTHLTKAHLFHDGRVQWTPPAIYKSSCSIDVTFFPFDQ 172
Query: 519 XTGXSXSGS 545
GS
Sbjct: 173 QNCTMKFGS 181
>BC095481-1|AAH95481.1| 591|Homo sapiens enabled homolog
(Drosophila) protein.
Length = 591
Score = 31.5 bits (68), Expect = 4.1
Identities = 14/33 (42%), Positives = 14/33 (42%)
Frame = -3
Query: 834 PGXAXXXXAXXXPPGXPXPAXXGXXGXPPGXPP 736
PG A A PPG P P G PP PP
Sbjct: 321 PGPAQASVALPPPPGPPPPPPLPSTGPPPPPPP 353
>BC065238-1|AAH65238.1| 527|Homo sapiens ENAH protein protein.
Length = 527
Score = 31.5 bits (68), Expect = 4.1
Identities = 14/33 (42%), Positives = 14/33 (42%)
Frame = -3
Query: 834 PGXAXXXXAXXXPPGXPXPAXXGXXGXPPGXPP 736
PG A A PPG P P G PP PP
Sbjct: 278 PGPAQASVALPPPPGPPPPPPLPSTGPPPPPPP 310
>AY345143-1|AAR04685.1| 570|Homo sapiens MENA protein.
Length = 570
Score = 31.5 bits (68), Expect = 4.1
Identities = 14/33 (42%), Positives = 14/33 (42%)
Frame = -3
Query: 834 PGXAXXXXAXXXPPGXPXPAXXGXXGXPPGXPP 736
PG A A PPG P P G PP PP
Sbjct: 321 PGPAQASVALPPPPGPPPPPPLPSTGPPPPPPP 353
>AL591380-2|CAH71476.1| 570|Homo sapiens enabled homolog
(Drosophila) protein.
Length = 570
Score = 31.5 bits (68), Expect = 4.1
Identities = 14/33 (42%), Positives = 14/33 (42%)
Frame = -3
Query: 834 PGXAXXXXAXXXPPGXPXPAXXGXXGXPPGXPP 736
PG A A PPG P P G PP PP
Sbjct: 321 PGPAQASVALPPPPGPPPPPPLPSTGPPPPPPP 353
>AL591380-1|CAH71475.1| 817|Homo sapiens enabled homolog
(Drosophila) protein.
Length = 817
Score = 31.5 bits (68), Expect = 4.1
Identities = 14/33 (42%), Positives = 14/33 (42%)
Frame = -3
Query: 834 PGXAXXXXAXXXPPGXPXPAXXGXXGXPPGXPP 736
PG A A PPG P P G PP PP
Sbjct: 568 PGPAQASVALPPPPGPPPPPPLPSTGPPPPPPP 600
>AL356216-3|CAI22019.1| 570|Homo sapiens enabled homolog
(Drosophila) protein.
Length = 570
Score = 31.5 bits (68), Expect = 4.1
Identities = 14/33 (42%), Positives = 14/33 (42%)
Frame = -3
Query: 834 PGXAXXXXAXXXPPGXPXPAXXGXXGXPPGXPP 736
PG A A PPG P P G PP PP
Sbjct: 321 PGPAQASVALPPPPGPPPPPPLPSTGPPPPPPP 353
>AL356216-2|CAI22020.1| 817|Homo sapiens enabled homolog
(Drosophila) protein.
Length = 817
Score = 31.5 bits (68), Expect = 4.1
Identities = 14/33 (42%), Positives = 14/33 (42%)
Frame = -3
Query: 834 PGXAXXXXAXXXPPGXPXPAXXGXXGXPPGXPP 736
PG A A PPG P P G PP PP
Sbjct: 568 PGPAQASVALPPPPGPPPPPPLPSTGPPPPPPP 600
>AK096246-1|BAC04736.1| 467|Homo sapiens protein ( Homo sapiens
cDNA FLJ38927 fis, clone NT2NE2012505, highly similar to
Gallus gallus mRNA for avena. ).
Length = 467
Score = 31.5 bits (68), Expect = 4.1
Identities = 14/33 (42%), Positives = 14/33 (42%)
Frame = -3
Query: 834 PGXAXXXXAXXXPPGXPXPAXXGXXGXPPGXPP 736
PG A A PPG P P G PP PP
Sbjct: 218 PGPAQASVALPPPPGPPPPPPLPSTGPPPPPPP 250
>AF519769-1|AAQ08487.1| 591|Homo sapiens mena protein protein.
Length = 591
Score = 31.5 bits (68), Expect = 4.1
Identities = 14/33 (42%), Positives = 14/33 (42%)
Frame = -3
Query: 834 PGXAXXXXAXXXPPGXPXPAXXGXXGXPPGXPP 736
PG A A PPG P P G PP PP
Sbjct: 321 PGPAQASVALPPPPGPPPPPPLPSTGPPPPPPP 353
>Y00762-1|CAA68731.1| 457|Homo sapiens protein ( Human mRNA for
muscle acetylcholine receptor alpha-subunit. ).
Length = 457
Score = 30.3 bits (65), Expect = 9.4
Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 4/42 (9%)
Frame = +3
Query: 342 VSSERLWRPDVVLLNAAATTAGDYAL----RARVSNTGSXXW 455
+ SE++WRPD+VL N A GD+A+ + + TG W
Sbjct: 100 IPSEKIWRPDLVLYNNA---DGDFAIVKFTKVLLQYTGHITW 138
>X02502-1|CAA26344.1| 457|Homo sapiens acetylcholine receptor
protein.
Length = 457
Score = 30.3 bits (65), Expect = 9.4
Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 4/42 (9%)
Frame = +3
Query: 342 VSSERLWRPDVVLLNAAATTAGDYAL----RARVSNTGSXXW 455
+ SE++WRPD+VL N A GD+A+ + + TG W
Sbjct: 100 IPSEKIWRPDLVLYNNA---DGDFAIVKFTKVLLQYTGHITW 138
>X01715-1|CAA25861.1| 520|Homo sapiens acetylcholine receptor gamma
chain precursor protein.
Length = 520
Score = 30.3 bits (65), Expect = 9.4
Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 5/62 (8%)
Frame = +2
Query: 140 MIDSLLATYDRDSPPDSKI--VVNLTLHLRHANI---RESESTVRIQADLQMNWIDKRLX 304
++ L+ YD + P + VVN++L L N+ E E + ++M W D RL
Sbjct: 32 LLADLMQNYDPNLRPAERDSDVVNVSLKLTLTNLISLNEREEALTTNVWIEMQWCDYRLR 91
Query: 305 WN 310
W+
Sbjct: 92 WD 93
>S77094-1|AAD14247.1| 457|Homo sapiens nicotinic acetylcholine
receptor alpha subunit|AChR protein.
Length = 457
Score = 30.3 bits (65), Expect = 9.4
Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 4/42 (9%)
Frame = +3
Query: 342 VSSERLWRPDVVLLNAAATTAGDYAL----RARVSNTGSXXW 455
+ SE++WRPD+VL N A GD+A+ + + TG W
Sbjct: 100 IPSEKIWRPDLVLYNNA---DGDFAIVKFTKVLLQYTGHITW 138
>BC111802-1|AAI11803.1| 465|Homo sapiens CHRNG protein protein.
Length = 465
Score = 30.3 bits (65), Expect = 9.4
Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 5/62 (8%)
Frame = +2
Query: 140 MIDSLLATYDRDSPPDSKI--VVNLTLHLRHANI---RESESTVRIQADLQMNWIDKRLX 304
++ L+ YD + P + VVN++L L N+ E E + ++M W D RL
Sbjct: 29 LLADLMQNYDPNLRPAERDSDVVNVSLKLTLTNLISLNEREEALTTNVWIEMQWCDYRLR 88
Query: 305 WN 310
W+
Sbjct: 89 WD 90
>BC006314-1|AAH06314.1| 269|Homo sapiens CHRNA1 protein protein.
Length = 269
Score = 30.3 bits (65), Expect = 9.4
Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 4/42 (9%)
Frame = +3
Query: 342 VSSERLWRPDVVLLNAAATTAGDYAL----RARVSNTGSXXW 455
+ SE++WRPD+VL N A GD+A+ + + TG W
Sbjct: 100 IPSEKIWRPDLVLYNNA---DGDFAIVKFTKVLLQYTGHITW 138
>AJ306454-1|CAC34819.1| 497|Homo sapiens neuronal nicotinic
acetylcholine receptor beta-4 subunit protein.
Length = 497
Score = 30.3 bits (65), Expect = 9.4
Identities = 15/64 (23%), Positives = 26/64 (40%)
Frame = +3
Query: 324 GCSTWLVSSERLWRPDVVLLNAAATTAGDYALRARVSNTGSXXWIXRLXISTXISMQXXX 503
G + + ++R+W PD+VL N T V + GS W+ + ++
Sbjct: 99 GVNILRIPAKRIWLPDIVLYNNDGTYEVSVYTNLIVRSNGSVLWLPPAIYKSACKIEVKY 158
Query: 504 XPTD 515
P D
Sbjct: 159 FPFD 162
>AC092165-3|AAY24103.1| 520|Homo sapiens unknown protein.
Length = 520
Score = 30.3 bits (65), Expect = 9.4
Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 5/62 (8%)
Frame = +2
Query: 140 MIDSLLATYDRDSPPDSKI--VVNLTLHLRHANI---RESESTVRIQADLQMNWIDKRLX 304
++ L+ YD + P + VVN++L L N+ E E + ++M W D RL
Sbjct: 32 LLADLMQNYDPNLRPAERDSDVVNVSLKLTLTNLISLNEREEALTTNVWIEMQWCDYRLR 91
Query: 305 WN 310
W+
Sbjct: 92 WD 93
>AC018890-1|AAY14687.1| 457|Homo sapiens unknown protein.
Length = 457
Score = 30.3 bits (65), Expect = 9.4
Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 4/42 (9%)
Frame = +3
Query: 342 VSSERLWRPDVVLLNAAATTAGDYAL----RARVSNTGSXXW 455
+ SE++WRPD+VL N A GD+A+ + + TG W
Sbjct: 100 IPSEKIWRPDLVLYNNA---DGDFAIVKFTKVLLQYTGHITW 138
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,372,150
Number of Sequences: 237096
Number of extensions: 1845487
Number of successful extensions: 4335
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 3601
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4319
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10928473528
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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