Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP11_FL5_D02
(857 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X78349-1|CAA55144.1| 686|Drosophila melanogaster Grd protein. 32 1.2
EF458626-1|ABO26063.1| 560|Drosophila melanogaster nicotinic ac... 32 1.2
AY036614-1|AAK67257.1| 219|Drosophila melanogaster nicotinic ac... 32 1.2
AJ554210-1|CAD86936.1| 542|Drosophila melanogaster nicotinic ac... 32 1.2
AE014298-2837|AAS65410.1| 219|Drosophila melanogaster CG32538-P... 32 1.2
AE014298-2836|AAS65409.1| 560|Drosophila melanogaster CG32538-P... 32 1.2
AE014298-2835|AAF48950.3| 541|Drosophila melanogaster CG32538-P... 32 1.2
AE014296-2969|AAF49298.2| 686|Drosophila melanogaster CG7446-PA... 32 1.2
Y15594-1|CAA75689.1| 776|Drosophila melanogaster nicotinic acet... 31 1.5
Y15593-1|CAA75688.1| 795|Drosophila melanogaster nicotinic acet... 31 1.5
AE014298-1164|AAF46361.2| 783|Drosophila melanogaster CG2302-PA... 31 1.5
X53583-1|CAA37652.1| 576|Drosophila melanogaster alpha-2-subuni... 31 2.0
X52274-1|CAA36517.1| 576|Drosophila melanogaster nicotinic acet... 31 2.0
X07194-1|CAA30172.1| 567|Drosophila melanogaster mature acetylc... 31 2.0
AY058446-1|AAL13675.1| 576|Drosophila melanogaster GH22843p pro... 31 2.0
AE014297-3556|AAF56303.1| 576|Drosophila melanogaster CG6844-PB... 31 2.0
AE014297-3555|AAF56302.2| 576|Drosophila melanogaster CG6844-PA... 31 2.0
X07956-1|CAA30778.1| 521|Drosophila melanogaster protein ( D. m... 30 3.5
X04016-3|CAA27641.1| 521|Drosophila melanogaster nicotinic AChR... 30 3.5
M20316-1|AAA28311.1| 521|Drosophila melanogaster protein ( D.me... 30 3.5
AE014297-3553|AAF56301.2| 567|Drosophila melanogaster CG5610-PA... 30 3.5
AE014296-848|AAF47900.1| 521|Drosophila melanogaster CG11348-PA... 30 3.5
AY036613-1|AAK67256.1| 482|Drosophila melanogaster nicotinic ac... 29 8.2
AJ272159-1|CAB77445.1| 568|Drosophila melanogaster nicotinic ac... 29 8.2
AF272778-1|AAM13390.1| 807|Drosophila melanogaster nicotinic ac... 29 8.2
AE014134-2462|AAF53374.3| 570|Drosophila melanogaster CG32975-P... 29 8.2
AE014134-2461|AAS64703.1| 808|Drosophila melanogaster CG32975-P... 29 8.2
AE014134-2460|AAS64702.1| 786|Drosophila melanogaster CG32975-P... 29 8.2
>X78349-1|CAA55144.1| 686|Drosophila melanogaster Grd protein.
Length = 686
Score = 31.9 bits (69), Expect = 1.2
Identities = 18/68 (26%), Positives = 33/68 (48%), Gaps = 4/68 (5%)
Frame = +2
Query: 110 ECENATSLSLMIDSLLATYDRDSPPD---SKIVVNLTLHLRHAN-IRESESTVRIQADLQ 277
+ N ++S ++D+LL YD PD + + + +R I E + T + +
Sbjct: 102 QSNNHANISELLDNLLRGYDNSIRPDFGGPPATIEVDIMVRSMGPISEVDMTYSMDCYFR 161
Query: 278 MNWIDKRL 301
+W+DKRL
Sbjct: 162 QSWVDKRL 169
>EF458626-1|ABO26063.1| 560|Drosophila melanogaster nicotinic
acetylcholine receptorDalpha7 protein.
Length = 560
Score = 31.9 bits (69), Expect = 1.2
Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +3
Query: 342 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNTGSXXWI 458
+ RLW+PDV++ N+A G YA V N GS ++
Sbjct: 137 IPPHRLWKPDVLMYNSADEGFDGTYATNVVVRNNGSCLYV 176
>AY036614-1|AAK67257.1| 219|Drosophila melanogaster nicotinic
acetylcholine receptorDalpha7 subunit protein.
Length = 219
Score = 31.9 bits (69), Expect = 1.2
Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +3
Query: 342 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNTGSXXWI 458
+ RLW+PDV++ N+A G YA V N GS ++
Sbjct: 137 IPPHRLWKPDVLMYNSADEGFDGTYATNVVVRNNGSCLYV 176
>AJ554210-1|CAD86936.1| 542|Drosophila melanogaster nicotinic
acetylcholine receptorsubunit Dalpha7 protein.
Length = 542
Score = 31.9 bits (69), Expect = 1.2
Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +3
Query: 342 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNTGSXXWI 458
+ RLW+PDV++ N+A G YA V N GS ++
Sbjct: 115 IPPHRLWKPDVLMYNSADEGFDGTYATNVVVRNNGSCLYV 154
>AE014298-2837|AAS65410.1| 219|Drosophila melanogaster CG32538-PC,
isoform C protein.
Length = 219
Score = 31.9 bits (69), Expect = 1.2
Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +3
Query: 342 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNTGSXXWI 458
+ RLW+PDV++ N+A G YA V N GS ++
Sbjct: 137 IPPHRLWKPDVLMYNSADEGFDGTYATNVVVRNNGSCLYV 176
>AE014298-2836|AAS65409.1| 560|Drosophila melanogaster CG32538-PA,
isoform A protein.
Length = 560
Score = 31.9 bits (69), Expect = 1.2
Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +3
Query: 342 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNTGSXXWI 458
+ RLW+PDV++ N+A G YA V N GS ++
Sbjct: 137 IPPHRLWKPDVLMYNSADEGFDGTYATNVVVRNNGSCLYV 176
>AE014298-2835|AAF48950.3| 541|Drosophila melanogaster CG32538-PB,
isoform B protein.
Length = 541
Score = 31.9 bits (69), Expect = 1.2
Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +3
Query: 342 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNTGSXXWI 458
+ RLW+PDV++ N+A G YA V N GS ++
Sbjct: 118 IPPHRLWKPDVLMYNSADEGFDGTYATNVVVRNNGSCLYV 157
>AE014296-2969|AAF49298.2| 686|Drosophila melanogaster CG7446-PA
protein.
Length = 686
Score = 31.9 bits (69), Expect = 1.2
Identities = 18/68 (26%), Positives = 33/68 (48%), Gaps = 4/68 (5%)
Frame = +2
Query: 110 ECENATSLSLMIDSLLATYDRDSPPD---SKIVVNLTLHLRHAN-IRESESTVRIQADLQ 277
+ N ++S ++D+LL YD PD + + + +R I E + T + +
Sbjct: 102 QSNNHANISELLDNLLRGYDNSIRPDFGGPPATIEVDIMVRSMGPISEVDMTYSMDCYFR 161
Query: 278 MNWIDKRL 301
+W+DKRL
Sbjct: 162 QSWVDKRL 169
>Y15594-1|CAA75689.1| 776|Drosophila melanogaster nicotinic
acetylcholine receptoralpha 3 subunit protein.
Length = 776
Score = 31.5 bits (68), Expect = 1.5
Identities = 20/69 (28%), Positives = 28/69 (40%), Gaps = 1/69 (1%)
Frame = +3
Query: 342 VSSERLWRPDVVLL-NAAATTAGDYALRARVSNTGSXXWIXRLXISTXISMQXXXXPTDM 518
V S+ +WRPD+VL NA A +A ++ TG W + + P D
Sbjct: 83 VPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGRVEWRPPAIYKSSCEIDVEYFPFDE 142
Query: 519 XTGXSXSGS 545
T GS
Sbjct: 143 QTCVMKFGS 151
>Y15593-1|CAA75688.1| 795|Drosophila melanogaster nicotinic
acetylcholine receptoralpha 3 subunit protein.
Length = 795
Score = 31.5 bits (68), Expect = 1.5
Identities = 20/69 (28%), Positives = 28/69 (40%), Gaps = 1/69 (1%)
Frame = +3
Query: 342 VSSERLWRPDVVLL-NAAATTAGDYALRARVSNTGSXXWIXRLXISTXISMQXXXXPTDM 518
V S+ +WRPD+VL NA A +A ++ TG W + + P D
Sbjct: 102 VPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGRVEWRPPAIYKSSCEIDVEYFPFDE 161
Query: 519 XTGXSXSGS 545
T GS
Sbjct: 162 QTCVMKFGS 170
>AE014298-1164|AAF46361.2| 783|Drosophila melanogaster CG2302-PA
protein.
Length = 783
Score = 31.5 bits (68), Expect = 1.5
Identities = 20/69 (28%), Positives = 28/69 (40%), Gaps = 1/69 (1%)
Frame = +3
Query: 342 VSSERLWRPDVVLL-NAAATTAGDYALRARVSNTGSXXWIXRLXISTXISMQXXXXPTDM 518
V S+ +WRPD+VL NA A +A ++ TG W + + P D
Sbjct: 102 VPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGRVEWRPPAIYKSSCEIDVEYFPFDE 161
Query: 519 XTGXSXSGS 545
T GS
Sbjct: 162 QTCVMKFGS 170
>X53583-1|CAA37652.1| 576|Drosophila melanogaster alpha-2-subunit
nicotinic acetylcholinereceptor precursor protein.
Length = 576
Score = 31.1 bits (67), Expect = 2.0
Identities = 25/81 (30%), Positives = 34/81 (41%), Gaps = 5/81 (6%)
Frame = +3
Query: 318 EWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL----RARVSNTGSXXWIXRLXISTX 482
E+G T L V SE +W PD+VL N A G+Y + +A + TG W +
Sbjct: 112 EYGGVTELYVPSEHIWLPDIVLYNNA---DGEYVVTTMTKAILHYTGKVVWTPPAIFKSS 168
Query: 483 ISMQXXXXPTDMXTGXSXSGS 545
+ P D T GS
Sbjct: 169 CEIDVRYFPFDQQTCFMKFGS 189
>X52274-1|CAA36517.1| 576|Drosophila melanogaster nicotinic
acetylcholine receptoralpha subunit protein.
Length = 576
Score = 31.1 bits (67), Expect = 2.0
Identities = 25/81 (30%), Positives = 34/81 (41%), Gaps = 5/81 (6%)
Frame = +3
Query: 318 EWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL----RARVSNTGSXXWIXRLXISTX 482
E+G T L V SE +W PD+VL N A G+Y + +A + TG W +
Sbjct: 112 EYGGVTELYVPSEHIWLPDIVLYNNA---DGEYVVTTMTKAILHYTGKVVWTPPAIFKSS 168
Query: 483 ISMQXXXXPTDMXTGXSXSGS 545
+ P D T GS
Sbjct: 169 CEIDVRYFPFDQQTCFMKFGS 189
>X07194-1|CAA30172.1| 567|Drosophila melanogaster mature
acetylcholine receptoralpha-like subunit protein.
Length = 567
Score = 31.1 bits (67), Expect = 2.0
Identities = 23/78 (29%), Positives = 32/78 (41%), Gaps = 4/78 (5%)
Frame = +3
Query: 324 GCSTWLVSSERLWRPDVVLLNAAATTAGDYAL----RARVSNTGSXXWIXRLXISTXISM 491
G T V SE +W PD+VL N A G+Y + +A + +TG W + +
Sbjct: 95 GVDTLHVPSEHIWHPDIVLYNNA---DGNYEVTIMTKAILHHTGKVVWKPPAIYKSFCEI 151
Query: 492 QXXXXPTDMXTGXSXSGS 545
P D T GS
Sbjct: 152 DVEYFPFDEQTCFMKFGS 169
>AY058446-1|AAL13675.1| 576|Drosophila melanogaster GH22843p
protein.
Length = 576
Score = 31.1 bits (67), Expect = 2.0
Identities = 25/81 (30%), Positives = 34/81 (41%), Gaps = 5/81 (6%)
Frame = +3
Query: 318 EWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL----RARVSNTGSXXWIXRLXISTX 482
E+G T L V SE +W PD+VL N A G+Y + +A + TG W +
Sbjct: 112 EYGGVTELYVPSEHIWLPDIVLYNNA---DGEYVVTTMTKAILHYTGKVVWTPPAIFKSS 168
Query: 483 ISMQXXXXPTDMXTGXSXSGS 545
+ P D T GS
Sbjct: 169 CEIDVRYFPFDQQTCFMKFGS 189
>AE014297-3556|AAF56303.1| 576|Drosophila melanogaster CG6844-PB,
isoform B protein.
Length = 576
Score = 31.1 bits (67), Expect = 2.0
Identities = 25/81 (30%), Positives = 34/81 (41%), Gaps = 5/81 (6%)
Frame = +3
Query: 318 EWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL----RARVSNTGSXXWIXRLXISTX 482
E+G T L V SE +W PD+VL N A G+Y + +A + TG W +
Sbjct: 112 EYGGVTELYVPSEHIWLPDIVLYNNA---DGEYVVTTMTKAILHYTGKVVWTPPAIFKSS 168
Query: 483 ISMQXXXXPTDMXTGXSXSGS 545
+ P D T GS
Sbjct: 169 CEIDVRYFPFDQQTCFMKFGS 189
>AE014297-3555|AAF56302.2| 576|Drosophila melanogaster CG6844-PA,
isoform A protein.
Length = 576
Score = 31.1 bits (67), Expect = 2.0
Identities = 25/81 (30%), Positives = 34/81 (41%), Gaps = 5/81 (6%)
Frame = +3
Query: 318 EWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL----RARVSNTGSXXWIXRLXISTX 482
E+G T L V SE +W PD+VL N A G+Y + +A + TG W +
Sbjct: 112 EYGGVTELYVPSEHIWLPDIVLYNNA---DGEYVVTTMTKAILHYTGKVVWTPPAIFKSS 168
Query: 483 ISMQXXXXPTDMXTGXSXSGS 545
+ P D T GS
Sbjct: 169 CEIDVRYFPFDQQTCFMKFGS 189
>X07956-1|CAA30778.1| 521|Drosophila melanogaster protein ( D.
melanogaster ardgene exons 1-2 (fragment Xba-IN2 of
gARD5) for nicotinicacetylcholine receptor. ).
Length = 521
Score = 30.3 bits (65), Expect = 3.5
Identities = 18/69 (26%), Positives = 31/69 (44%), Gaps = 4/69 (5%)
Frame = +3
Query: 351 ERLWRPDVVLLNAAATTAGDYALRAR----VSNTGSXXWIXRLXISTXISMQXXXXPTDM 518
+++W+PD+VL N A G+Y +R + + TG W+ + ++ P D
Sbjct: 107 DKVWKPDIVLFNNA---DGNYEVRYKSNVLIYPTGEVLWVPPAIYQSSCTIDVTYFPFDQ 163
Query: 519 XTGXSXSGS 545
T GS
Sbjct: 164 QTCIMKFGS 172
>X04016-3|CAA27641.1| 521|Drosophila melanogaster nicotinic AChR
protein.
Length = 521
Score = 30.3 bits (65), Expect = 3.5
Identities = 18/69 (26%), Positives = 31/69 (44%), Gaps = 4/69 (5%)
Frame = +3
Query: 351 ERLWRPDVVLLNAAATTAGDYALRAR----VSNTGSXXWIXRLXISTXISMQXXXXPTDM 518
+++W+PD+VL N A G+Y +R + + TG W+ + ++ P D
Sbjct: 107 DKVWKPDIVLFNNA---DGNYEVRYKSNVLIYPTGEVLWVPPAIYQSSCTIDVTYFPFDQ 163
Query: 519 XTGXSXSGS 545
T GS
Sbjct: 164 QTCIMKFGS 172
>M20316-1|AAA28311.1| 521|Drosophila melanogaster protein (
D.melanogaster acetylcholinereceptor-related protein
mRNA, complete cds. ).
Length = 521
Score = 30.3 bits (65), Expect = 3.5
Identities = 18/69 (26%), Positives = 31/69 (44%), Gaps = 4/69 (5%)
Frame = +3
Query: 351 ERLWRPDVVLLNAAATTAGDYALRAR----VSNTGSXXWIXRLXISTXISMQXXXXPTDM 518
+++W+PD+VL N A G+Y +R + + TG W+ + ++ P D
Sbjct: 107 DKVWKPDIVLFNNA---DGNYEVRYKSNVLIYPTGEVLWVPPAIYQSSCTIDVTYFPFDQ 163
Query: 519 XTGXSXSGS 545
T GS
Sbjct: 164 QTCIMKFGS 172
>AE014297-3553|AAF56301.2| 567|Drosophila melanogaster CG5610-PA
protein.
Length = 567
Score = 30.3 bits (65), Expect = 3.5
Identities = 23/78 (29%), Positives = 32/78 (41%), Gaps = 4/78 (5%)
Frame = +3
Query: 324 GCSTWLVSSERLWRPDVVLLNAAATTAGDYAL----RARVSNTGSXXWIXRLXISTXISM 491
G T V SE +W PD+VL N A G+Y + +A + +TG W + +
Sbjct: 95 GVDTLHVPSEHIWLPDIVLYNNA---DGNYEVTIMTKAILHHTGKVVWKPPAIYKSFCEI 151
Query: 492 QXXXXPTDMXTGXSXSGS 545
P D T GS
Sbjct: 152 DVEYFPFDEQTCFMKFGS 169
>AE014296-848|AAF47900.1| 521|Drosophila melanogaster CG11348-PA,
isoform A protein.
Length = 521
Score = 30.3 bits (65), Expect = 3.5
Identities = 18/69 (26%), Positives = 31/69 (44%), Gaps = 4/69 (5%)
Frame = +3
Query: 351 ERLWRPDVVLLNAAATTAGDYALRAR----VSNTGSXXWIXRLXISTXISMQXXXXPTDM 518
+++W+PD+VL N A G+Y +R + + TG W+ + ++ P D
Sbjct: 107 DKVWKPDIVLFNNA---DGNYEVRYKSNVLIYPTGEVLWVPPAIYQSSCTIDVTYFPFDQ 163
Query: 519 XTGXSXSGS 545
T GS
Sbjct: 164 QTCIMKFGS 172
>AY036613-1|AAK67256.1| 482|Drosophila melanogaster nicotinic
acetylcholine receptorDalpha5 subunit protein.
Length = 482
Score = 29.1 bits (62), Expect = 8.2
Identities = 13/40 (32%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Frame = +3
Query: 342 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNTGSXXWI 458
+ R+W+PDV++ N+A G Y V N GS ++
Sbjct: 389 IPPHRIWKPDVLMYNSADEGFDGTYQTNVVVRNNGSCLYV 428
>AJ272159-1|CAB77445.1| 568|Drosophila melanogaster nicotinic
acetylcholine receptorDalpha 4 subunit protein.
Length = 568
Score = 29.1 bits (62), Expect = 8.2
Identities = 19/69 (27%), Positives = 27/69 (39%), Gaps = 1/69 (1%)
Frame = +3
Query: 342 VSSERLWRPDVVLL-NAAATTAGDYALRARVSNTGSXXWIXRLXISTXISMQXXXXPTDM 518
V S+ +WRPD+VL NA A +A + + G W + + P D
Sbjct: 117 VPSDHIWRPDIVLYNNADGNFEVTLATKATIYSEGLVEWKPPAIYKSSCEIDVEYFPFDE 176
Query: 519 XTGXSXSGS 545
T GS
Sbjct: 177 QTCVLKFGS 185
>AF272778-1|AAM13390.1| 807|Drosophila melanogaster nicotinic
acetylcholine receptorDalpha5 subunit protein.
Length = 807
Score = 29.1 bits (62), Expect = 8.2
Identities = 13/40 (32%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Frame = +3
Query: 342 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNTGSXXWI 458
+ R+W+PDV++ N+A G Y V N GS ++
Sbjct: 388 IPPHRIWKPDVLMYNSADEGFDGTYQTNVVVRNNGSCLYV 427
>AE014134-2462|AAF53374.3| 570|Drosophila melanogaster CG32975-PA,
isoform A protein.
Length = 570
Score = 29.1 bits (62), Expect = 8.2
Identities = 13/40 (32%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Frame = +3
Query: 342 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNTGSXXWI 458
+ R+W+PDV++ N+A G Y V N GS ++
Sbjct: 340 IPPHRIWKPDVLMYNSADEGFDGTYQTNVVVRNNGSCLYV 379
>AE014134-2461|AAS64703.1| 808|Drosophila melanogaster CG32975-PB,
isoform B protein.
Length = 808
Score = 29.1 bits (62), Expect = 8.2
Identities = 13/40 (32%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Frame = +3
Query: 342 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNTGSXXWI 458
+ R+W+PDV++ N+A G Y V N GS ++
Sbjct: 389 IPPHRIWKPDVLMYNSADEGFDGTYQTNVVVRNNGSCLYV 428
>AE014134-2460|AAS64702.1| 786|Drosophila melanogaster CG32975-PC,
isoform C protein.
Length = 786
Score = 29.1 bits (62), Expect = 8.2
Identities = 13/40 (32%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Frame = +3
Query: 342 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNTGSXXWI 458
+ R+W+PDV++ N+A G Y V N GS ++
Sbjct: 389 IPPHRIWKPDVLMYNSADEGFDGTYQTNVVVRNNGSCLYV 428
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,511,486
Number of Sequences: 53049
Number of extensions: 528283
Number of successful extensions: 1503
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 1172
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1484
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4126982652
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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