Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP11_FL5_C14
(820 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 53 3e-09
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 51 1e-08
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 49 6e-08
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 49 6e-08
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 48 8e-08
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 48 8e-08
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 48 1e-07
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 48 1e-07
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 47 2e-07
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 47 2e-07
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 46 3e-07
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 46 3e-07
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 46 3e-07
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 46 3e-07
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 46 3e-07
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 46 3e-07
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 46 4e-07
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 46 4e-07
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 45 7e-07
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 42 5e-06
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 42 7e-06
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 42 9e-06
DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated... 25 0.64
DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chlor... 23 2.6
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 23 4.5
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 53.2 bits (122), Expect = 3e-09
Identities = 44/152 (28%), Positives = 65/152 (42%), Gaps = 9/152 (5%)
Frame = +1
Query: 82 IASAAECENATSLSLMIDSLLATYDRDSPPDSK----IVVNLTLHLRHA---NIRESEST 240
I SA C + D LL+ Y+R P S +VV L L L N+++ T
Sbjct: 9 ILSARICHGNPDAKRLYDDLLSNYNRLIRPVSNNNDTVVVKLGLRLSQLIDLNLKDQILT 68
Query: 241 VRIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTXGDYAL-RAR 414
+ L+ W D + W+ E+G T L V SE +W PD+VL N A G + +A
Sbjct: 69 TNVW--LEHEWQDHKFQWDPAEYGGVTELYVPSEHIWLPDIVLYNNADGEYGVTTMTKAI 126
Query: 415 VSNNGSVSWIKRLDIXTPISMQLDXWPXXLQT 510
+ G V W + + + +P QT
Sbjct: 127 LHYTGKVLWTPPAIFKSSCEIDVRYFPFDQQT 158
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 50.8 bits (116), Expect = 1e-08
Identities = 36/146 (24%), Positives = 64/146 (43%), Gaps = 7/146 (4%)
Frame = +1
Query: 106 NATSLSLMIDSLLATYDRDSPPD---SKIVVNLTLHLRHAN-IRESESTVRIQADLQMNW 273
N +++S ++D+LL YD PD V + + +R I E + T + + +W
Sbjct: 2 NHSNISELLDNLLRGYDNSVRPDFGGPPATVEVDIMVRSMGPISEVDMTYSMDCYFRQSW 61
Query: 274 IDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAAAT---TXGDYALRARVSNNGSVSWI 444
+D+RL++ G+ + + R+W+PD N + T R+ +G V +
Sbjct: 62 VDRRLAFQGGKETLALSISMLARIWKPDTYFYNGKHSYLHTITSPNKFVRLYQDGRVLYS 121
Query: 445 KRLDIXTPISMQLDXWPXXLQTXTFQ 522
RL I M L+ +P Q Q
Sbjct: 122 SRLTIKAGCPMNLENFPMDTQRCPLQ 147
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 48.8 bits (111), Expect = 6e-08
Identities = 22/78 (28%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Frame = +1
Query: 217 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTX 390
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 93 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 152
Query: 391 GDYALRARVSNNGSVSWI 444
G Y V++NGS ++
Sbjct: 153 GTYQTNVVVTHNGSCLYV 170
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 48.8 bits (111), Expect = 6e-08
Identities = 22/78 (28%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Frame = +1
Query: 217 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTX 390
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 93 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 152
Query: 391 GDYALRARVSNNGSVSWI 444
G Y V++NGS ++
Sbjct: 153 GTYQTNVVVTHNGSCLYV 170
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 48.4 bits (110), Expect = 8e-08
Identities = 22/78 (28%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Frame = +1
Query: 217 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTX 390
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 391 GDYALRARVSNNGSVSWI 444
G Y V++NGS ++
Sbjct: 85 GTYQTSVVVTHNGSCLYV 102
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 48.4 bits (110), Expect = 8e-08
Identities = 35/146 (23%), Positives = 63/146 (43%), Gaps = 9/146 (6%)
Frame = +1
Query: 100 CENATSLSLMIDSLLATYDRDSPPDSKIVVNLTLHLR-------HANIRESESTVRIQAD 258
C + D LL+ Y++ P + LT+ ++ N++ T +
Sbjct: 19 CSGNPDAKRLYDDLLSNYNKLVRPVVNVTDALTVKIKLKLSQLIDVNLKNQIMTTNLW-- 76
Query: 259 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLL-NAAATTXGDYALRARVSNNGS 432
++ +W D +L W+ E+G L V S+ +WRPD+VL NA A +A ++ G
Sbjct: 77 VEQSWYDYKLKWDPKEYGGVEMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGR 136
Query: 433 VSWIKRLDIXTPISMQLDXWPXXLQT 510
V W + + ++ +P QT
Sbjct: 137 VEWKPPAIYKSSCEIDVEYFPFDEQT 162
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 48.0 bits (109), Expect = 1e-07
Identities = 28/95 (29%), Positives = 47/95 (49%), Gaps = 6/95 (6%)
Frame = +1
Query: 100 CENATSLSLMIDS---LLATYDRDSPPDSKIV--VNLTLHLRHANIRESESTVRIQADLQ 264
C++ TS S + L YDRD P+ K ++ L ++H N+ E TV L+
Sbjct: 28 CKDITSTSALYRLKLYLFCDYDRDIIPEQKNATKIDFGLSIQHYNVDEYSHTVDFHVMLK 87
Query: 265 MNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVL 366
+ W L+W + E+ ++ V S +W PD+V+
Sbjct: 88 LMWEQSHLTWKSSEFDSINSIRVKSYEIWVPDIVM 122
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 47.6 bits (108), Expect = 1e-07
Identities = 36/136 (26%), Positives = 61/136 (44%), Gaps = 12/136 (8%)
Frame = +1
Query: 70 LTCAIASAAECENATSLSLMIDSLLATYDRDSPP----DSKIVVNLTLHLRH---ANIRE 228
++C +A + + D LL+ Y+R P ++ V + L L N++
Sbjct: 5 ISCLVAPFPGASANSEAKRLYDDLLSNYNRLIRPVGNNSDRLTVKMGLRLSQLIDVNLKN 64
Query: 229 SESTVRIQADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLNAAATTXGDYAL 405
T + ++ W D +L WN ++G T V SE +W PD+VL N A G+Y +
Sbjct: 65 QIMTTNVW--VEQEWNDYKLKWNPDDYGGVDTLHVPSEHIWLPDIVLYNNA---DGNYEV 119
Query: 406 ----RARVSNNGSVSW 441
+A + + G V W
Sbjct: 120 TIMTKAILHHTGKVVW 135
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 46.8 bits (106), Expect = 2e-07
Identities = 29/117 (24%), Positives = 56/117 (47%), Gaps = 6/117 (5%)
Frame = +1
Query: 178 KIVVNLTL-HLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWR 351
K+ VN L ++ N+ E ++ L+ W D +L W+ ++ G + +++W+
Sbjct: 51 KVHVNFGLAFVQLINVNEKNQIMKSNVWLRFIWTDYQLQWDEADYGGIGVLRLPPDKVWK 110
Query: 352 PDVVLLNAAATTXGDYALRAR----VSNNGSVSWIKRLDIXTPISMQLDXWPXXLQT 510
PD+VL N A G+Y +R + + NG V W+ + ++ + +P QT
Sbjct: 111 PDIVLFNNA---DGNYEVRYKSNVLIYPNGDVLWVPPAIYQSSCTIDVTYFPFDQQT 164
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 46.8 bits (106), Expect = 2e-07
Identities = 36/138 (26%), Positives = 68/138 (49%), Gaps = 10/138 (7%)
Frame = +1
Query: 127 MIDSLLATYDRDSPP--DSKIVVNLTLHLRHANIRESESTVRIQAD---LQMNWIDKRLS 291
+ D LL+ Y++ P ++ V+ + + L+ + + + +I ++ +W D +L
Sbjct: 32 LYDDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLR 91
Query: 292 WNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTXGDYAL----RARVSNNGSVSWIKRLD 456
W E+G L V S+ +WRPD+VL N A G+Y + +A V +G V W
Sbjct: 92 WEPKEYGGVKMLHVPSDHIWRPDIVLYNNA---DGNYEVTLMTKATVYYSGLVVWQPPAV 148
Query: 457 IXTPISMQLDXWPXXLQT 510
+ S+ ++ +P +QT
Sbjct: 149 YKSSCSIDVEFFPYDVQT 166
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 46.4 bits (105), Expect = 3e-07
Identities = 21/78 (26%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Frame = +1
Query: 217 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTX 390
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 391 GDYALRARVSNNGSVSWI 444
G Y V+++GS ++
Sbjct: 85 GTYQTSVVVTHDGSCLYV 102
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 46.4 bits (105), Expect = 3e-07
Identities = 21/78 (26%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Frame = +1
Query: 217 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTX 390
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 391 GDYALRARVSNNGSVSWI 444
G Y V+++GS ++
Sbjct: 85 GTYQTSVVVTHDGSCLYV 102
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 46.4 bits (105), Expect = 3e-07
Identities = 21/78 (26%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Frame = +1
Query: 217 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTX 390
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 391 GDYALRARVSNNGSVSWI 444
G Y V+++GS ++
Sbjct: 85 GTYQTSVVVTHDGSCLYV 102
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 46.4 bits (105), Expect = 3e-07
Identities = 21/78 (26%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Frame = +1
Query: 217 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTX 390
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 391 GDYALRARVSNNGSVSWI 444
G Y V+++GS ++
Sbjct: 85 GTYQTSVVVTHDGSCLYV 102
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 46.4 bits (105), Expect = 3e-07
Identities = 21/78 (26%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Frame = +1
Query: 217 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTX 390
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 391 GDYALRARVSNNGSVSWI 444
G Y V+++GS ++
Sbjct: 85 GTYQTSVVVTHDGSCLYV 102
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 46.4 bits (105), Expect = 3e-07
Identities = 36/117 (30%), Positives = 53/117 (45%), Gaps = 12/117 (10%)
Frame = +1
Query: 127 MIDSLLATYDRDSPPDSKIVVNLTLHLR-------HANIRESESTVRIQADLQMNWIDKR 285
+ D LL+ Y+R P LT+ L N++ T + ++ W D +
Sbjct: 37 LYDDLLSNYNRLIRPVMNNTETLTVQLGLKLSQLIEMNLKNQVMTTNVW--VEQRWNDYK 94
Query: 286 LSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTXGDYAL----RARVSNNGSVSW 441
L WN E+G L V SE +W PD+VL N A G+Y + +A + G VSW
Sbjct: 95 LKWNPEEYGGVEMLYVPSENIWLPDIVLYNNA---DGNYEVTLMTKATLKYTGDVSW 148
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 46.0 bits (104), Expect = 4e-07
Identities = 33/135 (24%), Positives = 63/135 (46%), Gaps = 7/135 (5%)
Frame = +1
Query: 127 MIDSLLATYDRDSPP--DSKIVVNLTLHLRHANIRESESTVRIQAD---LQMNWIDKRLS 291
+ D LL+ Y++ P ++ V+ + + L+ + + + +I ++ +W D +L
Sbjct: 32 LYDDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLR 91
Query: 292 WNAGEWGCSTWL-VSSERLWRPDVVLL-NAAATTXGDYALRARVSNNGSVSWIKRLDIXT 465
W E+G L V S+ +WRPD+VL NA A +A + + G V W +
Sbjct: 92 WEPKEYGGVKMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATIYHQGLVEWKPPAIYKS 151
Query: 466 PISMQLDXWPXXLQT 510
+ ++ +P QT
Sbjct: 152 SCEIDVEYFPFDEQT 166
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 46.0 bits (104), Expect = 4e-07
Identities = 28/108 (25%), Positives = 45/108 (41%), Gaps = 3/108 (2%)
Frame = +1
Query: 181 IVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPD 357
+V L+LH ++ E + + W D L WNA E+ G V R+WRPD
Sbjct: 33 VVFGLSLH-HIIDVDEKNQILTTNCWVTQIWTDHHLKWNASEFAGIRVIRVPYNRVWRPD 91
Query: 358 VVLLNAAATTXGDYALRAR--VSNNGSVSWIKRLDIXTPISMQLDXWP 495
+L N A + VS+ G V W+ + + ++ +P
Sbjct: 92 TILYNNADPQYSSAVINTNVIVSHTGEVVWLSHGIFRSSCDIDVEFFP 139
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 45.2 bits (102), Expect = 7e-07
Identities = 32/129 (24%), Positives = 59/129 (45%), Gaps = 7/129 (5%)
Frame = +1
Query: 79 AIASAAECENATSLSLMIDSLLATYDRDSPP----DSKIVVNLTLHLRHA-NIRESESTV 243
A+A++ + +++ LL TY+ P +V++ L L ++ E +
Sbjct: 11 ALAASGLVNGGSHEKRLLNDLLDTYNVLERPVGNESEPLVLSFGLTLMQIIDVDEKNQLL 70
Query: 244 RIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAA-ATTXGDYALRARV 417
L++ W D + WN ++G L + RLW+PDV++ N+A G Y V
Sbjct: 71 ITNLWLKLEWNDVNMRWNVSDYGGVRDLRIPPHRLWKPDVLMYNSADEGFDGTYPTNVVV 130
Query: 418 SNNGSVSWI 444
NNG+ ++
Sbjct: 131 KNNGTCLYV 139
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 42.3 bits (95), Expect = 5e-06
Identities = 36/156 (23%), Positives = 66/156 (42%), Gaps = 8/156 (5%)
Frame = +1
Query: 52 FWLPFLLTCAIASAAECENATSLSLMIDSLLATYDRDSPPDS--KIVVNLTLHL--RHAN 219
F +LL C ++ T+L + L YD + P S +I N+T+ L +
Sbjct: 27 FGFSYLLNCK-----NYDHPTTLLKLKRYLFCEYDPNVRPISSHQIANNVTMQLLPKLME 81
Query: 220 IRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAAATTXGD 396
+ S + + + + + W D LSW ++ G + V S+ +W PD+ + N+ T
Sbjct: 82 FDDWTSVMELHSWMTLMWTDSHLSWKPSDFDGINYIYVKSDDIWVPDISVYNSGDMTFDQ 141
Query: 397 YAL---RARVSNNGSVSWIKRLDIXTPISMQLDXWP 495
+ V ++GSVS + + + WP
Sbjct: 142 TGIPPTTCLVFSSGSVSCVPSVKHVAKCATDFSSWP 177
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 41.9 bits (94), Expect = 7e-06
Identities = 31/140 (22%), Positives = 61/140 (43%), Gaps = 8/140 (5%)
Frame = +1
Query: 115 SLSLMIDSLLATYDRDSPPD----SKIVVNLTLHLRHAN-IRESESTVRIQADLQMNWID 279
++++++++LL Y+ + P + VV + +R + E + + + +W D
Sbjct: 36 NITMVLENLLMNYENNQLPTHGKGTPTVVKTNILIRSMGPVSELDMDYSMDCYFRQSWRD 95
Query: 280 KRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAAATTXGDYAL---RARVSNNGSVSWIKR 450
RLS+ S + ER+WRPD N + + R+S +G + + R
Sbjct: 96 SRLSFLGPIKSLSLSIKMLERIWRPDTYFYNGKHSYVHTITVPNKLLRISQDGDILYSMR 155
Query: 451 LDIXTPISMQLDXWPXXLQT 510
L I M+L +P Q+
Sbjct: 156 LTIKAKCPMELRNFPMDRQS 175
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 41.5 bits (93), Expect = 9e-06
Identities = 40/171 (23%), Positives = 70/171 (40%), Gaps = 12/171 (7%)
Frame = +1
Query: 46 ILFWLPFLLTCAIASAAECENATSLSLMIDSLLATYDRDSPP------DSKIVVNLTLHL 207
+L L FLL + + + ++D++L YD P D +V + L +
Sbjct: 8 LLVLLTFLLHPSRCTQGKVNYREKEKEVLDNILGGYDARIRPSGENATDGPAIVRVNLFV 67
Query: 208 RH-ANIRESESTVRIQADLQMNWIDKRLSWN--AGEWGCSTWLVSSERLWRPDVVLLNAA 378
R A I + + +Q + W+D+RL +N G T L + R+W PD+ N
Sbjct: 68 RSIATISDIKMEYSVQLTFREQWLDERLRFNDFGGRLKYLT-LTDASRVWMPDLFFSNEK 126
Query: 379 ATTXGDYAL---RARVSNNGSVSWIKRLDIXTPISMQLDXWPXXLQTXTFQ 522
+ + R+ NGSV + R+ + M L +P Q + +
Sbjct: 127 EGHFHNIIMPNVYIRIFPNGSVLYSIRISLTLSCPMNLKLYPLDRQVCSLR 177
>DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 391
Score = 25.4 bits (53), Expect = 0.64
Identities = 25/120 (20%), Positives = 50/120 (41%), Gaps = 11/120 (9%)
Frame = +1
Query: 181 IVVNLTLHLRHAN-IRESESTVRIQADLQMNWIDKRLS-----WNAGEWGCSTWLVSSER 342
++V+ + + N I + R+ ++ +WI+ RL + G+ + +
Sbjct: 11 VLVDFNIFVADINSINVEDMDFRVDMFVRQSWIESRLDMPDYIFEEGDDYVTLPPEFFDS 70
Query: 343 LWRPDVVLLNAAATTXGDYALRARVSN-----NGSVSWIKRLDIXTPISMQLDXWPXXLQ 507
LW+PD LNA + AL + S+ N +V + R+ M+ +P +Q
Sbjct: 71 LWQPDPYFLNAKVSEIA--ALNHKFSSVTLYRNKTVKYSARMHAIIACQMEFQLYPMDIQ 128
>DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chloride
channel protein.
Length = 383
Score = 23.4 bits (48), Expect = 2.6
Identities = 21/102 (20%), Positives = 41/102 (40%), Gaps = 5/102 (4%)
Frame = +1
Query: 217 NIRESESTVRIQADLQMNWIDKRLSW--NAGEWGCSTWLVSSERLWRPDVVLLNAAATTX 390
+I E T L +W D RL N E + +WRPD NA T
Sbjct: 43 SINEESMTYVADIFLAQSWRDSRLRLPENMSEDYRILDVDWLHNIWRPDCFFKNAKKVTF 102
Query: 391 GDYALRAR---VSNNGSVSWIKRLDIXTPISMQLDXWPXXLQ 507
+ ++ + ++ ++ ++ +L + +M+ + +P Q
Sbjct: 103 HEMSIPNHYLWLYHDKTLLYMSKLTLVLSCAMKFESYPHDTQ 144
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 22.6 bits (46), Expect = 4.5
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = -2
Query: 324 PSAAAPLPCVPTQS 283
PSA AP+P +P S
Sbjct: 411 PSAGAPMPPIPNMS 424
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 183,561
Number of Sequences: 438
Number of extensions: 3667
Number of successful extensions: 59
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 42
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26096055
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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