Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP11_FL5_C09
(792 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBP16F5.07 |apm1||AP-1 adaptor complex subunit Apm1 |Schizosacc... 125 6e-30
SPAC31A2.09c |apm4||AP-2 adaptor complex subunit Apm4 |Schizosac... 116 3e-27
SPBC651.11c |apm3||AP-3 adaptor complex subunit Apm3 |Schizosacc... 42 1e-04
SPBC685.04c |aps2||AP-2 adaptor complex subunit Aps2 |Schizosacc... 33 0.047
SPCC1682.02c |mcm3||MCM complex subunit Mcm3|Schizosaccharomyces... 31 0.25
SPCC285.08 |ret2||coatomer delta subunit Ret2 |Schizosaccharomyc... 31 0.25
SPBC19G7.08c |||arrestin|Schizosaccharomyces pombe|chr 2|||Manual 28 1.8
SPBC12D12.04c |pck2|sts6, pkc1|protein kinase C |Schizosaccharom... 27 2.3
SPAC824.09c |||GTPase activating protein |Schizosaccharomyces po... 27 3.1
SPCC1020.02 |spc7||kinetochore protein Spc7|Schizosaccharomyces ... 27 4.1
SPAC30D11.05 |aps3||AP-3 adaptor complex subunit Aps3 |Schizosac... 27 4.1
SPCC320.11c ||SPCC330.18|RNA-binding protein|Schizosaccharomyces... 26 5.4
SPAC1002.05c |jmj2||histone demethylase Jmj2 |Schizosaccharomyce... 26 5.4
SPAPB2B4.04c ||pmc1, pmc1|P-type ATPase, calcium transporting Pm... 26 5.4
SPCP31B10.06 |mug190||C2 domain protein |Schizosaccharomyces pom... 26 7.1
SPCC1259.11c |gyp2||GTPase activating protein Gyp2 |Schizosaccha... 25 9.4
>SPBP16F5.07 |apm1||AP-1 adaptor complex subunit Apm1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 426
Score = 125 bits (302), Expect = 6e-30
Identities = 73/199 (36%), Positives = 111/199 (55%), Gaps = 2/199 (1%)
Frame = +1
Query: 181 MIGGLFVYNHKGEVLISRVYRDDIGRNAVDAFRV--NVIHARQQVRSPVTNIARTSFFHI 354
M +FV N KG+V+ISR YR DI + V+ F + + Q +P ++ +I
Sbjct: 1 MASAIFVLNLKGKVIISRDYRADIPMSVVEKFLPLKSEVEEEQGFSTPCLTHEGINYIYI 60
Query: 355 KRANIWLAAVTKQNVDAAMVFEFLLKIIDVMQSYFGKISEENIKNNFVLIYELLDEILDF 534
+++L A++K N DA + FL K+ DV YF ++ EE+I++NFVL+YELLDEI+DF
Sbjct: 61 HHNDVYLLALSKMNSDAMEMLVFLRKMADVFIDYFKELQEESIRDNFVLVYELLDEIMDF 120
Query: 535 GYPQNSDTGVLKTFITQQGIKSASKEEQAQITSQVTGXIGWRREGXSTDETXWSLMY*NY 714
G+PQ ++T +L+ +ITQ S + ++ A +T I WR EG + L
Sbjct: 121 GFPQTTETKILQEYITQ---TSNTVKKHAPPPIAMTNAISWRSEGIHYRKNEVFLDVIES 177
Query: 715 VNLLMSPQGQVXLLXWLGK 771
VNL+ + G V LGK
Sbjct: 178 VNLIAAADGTVIQSEILGK 196
>SPAC31A2.09c |apm4||AP-2 adaptor complex subunit Apm4
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 446
Score = 116 bits (280), Expect = 3e-27
Identities = 60/199 (30%), Positives = 110/199 (55%), Gaps = 10/199 (5%)
Frame = +1
Query: 181 MIGGLFVYNHKGEVLISRVYRDDIGRNAVDAFRVNVIHARQQVRSPVTNIARTSFFHIKR 360
MI GLF++N KG+ LI + +R D+ ++ + FRV ++ R P+ +I +++ + K
Sbjct: 1 MISGLFIFNLKGDTLICKTFRHDLKKSVTEIFRVAIL-TNTDYRHPIVSIGSSTYIYTKH 59
Query: 361 ANIWLAAVTKQNVDAAMVFEFLLKIIDVMQSYFGKISEENIKNNFVLIYELLDEILDFGY 540
++++ A+TK N + +V EFL +I + YFGK++E +K+N I+ELLDE++D+G
Sbjct: 60 EDLYVVAITKGNPNVMIVLEFLESLIQDLTHYFGKLNENTVKDNVSFIFELLDEMIDYGI 119
Query: 541 PQNSDTGVLKTFITQQGIK------SASKEEQAQI----TSQVTGXIGWRREGXSTDETX 690
Q ++ L ++ +K S + +Q+ +S++ G + WRR G +
Sbjct: 120 IQTTEPDALARSVSITAVKKKGNALSLKRSHSSQLAHTTSSEIPGSVPWRRAGIKYRKNS 179
Query: 691 WSLMY*NYVNLLMSPQGQV 747
+ +NLL+S G V
Sbjct: 180 IYIDIVERMNLLISSTGNV 198
>SPBC651.11c |apm3||AP-3 adaptor complex subunit Apm3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 425
Score = 41.9 bits (94), Expect = 1e-04
Identities = 16/72 (22%), Positives = 40/72 (55%)
Frame = +1
Query: 364 NIWLAAVTKQNVDAAMVFEFLLKIIDVMQSYFGKISEENIKNNFVLIYELLDEILDFGYP 543
++ L T + + + + + +I+DV++++FG + ++ N +I +LL E++D+GY
Sbjct: 66 DVRLCIPTTCDTEPLYIHDIMRRIVDVVKTFFGGFNASKVEKNVCVIVQLLAEMIDYGYA 125
Query: 544 QNSDTGVLKTFI 579
+ L+ +
Sbjct: 126 TCMEPNALQDIV 137
>SPBC685.04c |aps2||AP-2 adaptor complex subunit Aps2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 143
Score = 33.1 bits (72), Expect = 0.047
Identities = 24/119 (20%), Positives = 54/119 (45%), Gaps = 3/119 (2%)
Frame = +1
Query: 181 MIGGLFVYNHKGEVLISRVYR--DDIGRNAVDAFRVNVIHAR-QQVRSPVTNIARTSFFH 351
MI + + N G+ +S+ Y DD + + A +I R Q+ ++ + +
Sbjct: 1 MIQFILIQNRHGKNRLSKYYVPFDDDEKVRLKARIHQLISQRNQKFQANFLEWENSKLVY 60
Query: 352 IKRANIWLAAVTKQNVDAAMVFEFLLKIIDVMQSYFGKISEENIKNNFVLIYELLDEIL 528
+ A ++ + + E + ++++ S+FG + E ++ NF + +LDEI+
Sbjct: 61 RRYAGLYFCFCVDSTDNDLAILEMIHFFVEILDSFFGNVCELDLIFNFYKVSAILDEII 119
>SPCC1682.02c |mcm3||MCM complex subunit Mcm3|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 879
Score = 30.7 bits (66), Expect = 0.25
Identities = 17/55 (30%), Positives = 27/55 (49%)
Frame = -3
Query: 550 NSEGNQSPRSHQATHRSEQSYS*CSLQKSCQNTIASHQ*SSTGTQIPWPRPHFAL 386
+S + RS AT +S++S S + S T S+ ++ TQ+ WP H L
Sbjct: 719 DSGSRRVTRSQNATSQSQESGS--EIGSSIAGTAGSYNVGTSNTQLSWPSTHSTL 771
>SPCC285.08 |ret2||coatomer delta subunit Ret2 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 240
Score = 30.7 bits (66), Expect = 0.25
Identities = 27/140 (19%), Positives = 57/140 (40%), Gaps = 2/140 (1%)
Frame = +1
Query: 199 VYNHKGEVLISRVYRDDIGRNAVDAFRVNVIHARQQVRSPVTNIARTS--FFHIKRANIW 372
+ N G+ +ISR +R+ + R V++ ++ A +S T + + F + ++
Sbjct: 8 IVNRGGKAIISRQFRE-MSRVRVESL-LSSFPALVSEKSQNTTVESDNVRFVYQPLDELY 65
Query: 373 LAAVTKQNVDAAMVFEFLLKIIDVMQSYFGKISEENIKNNFVLIYELLDEILDFGYPQNS 552
+ +T + + L + V+ S + E I I+ DE GY N
Sbjct: 66 IVLITNLQSNILQDIDTLHLLSQVVTSICSSLEEREILEYAFEIFTAFDEATSLGYRDNV 125
Query: 553 DTGVLKTFITQQGIKSASKE 612
+KT++ + + +E
Sbjct: 126 SLTQIKTYLEMESHEEKIQE 145
>SPBC19G7.08c |||arrestin|Schizosaccharomyces pombe|chr 2|||Manual
Length = 483
Score = 27.9 bits (59), Expect = 1.8
Identities = 12/46 (26%), Positives = 28/46 (60%)
Frame = +1
Query: 349 HIKRANIWLAAVTKQNVDAAMVFEFLLKIIDVMQSYFGKISEENIK 486
+I+ N + + +++ A++ E +++DV QS+ G + EEN++
Sbjct: 414 NIEITNPIIVSPVERSRSQALLNEIQTRVLDVRQSHGGVVLEENVR 459
>SPBC12D12.04c |pck2|sts6, pkc1|protein kinase C
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1016
Score = 27.5 bits (58), Expect = 2.3
Identities = 14/50 (28%), Positives = 20/50 (40%)
Frame = -1
Query: 282 HSECVHSITTNIISVDSRDQHLAFMVINEQAPDHCG*GLTLFQNWFQCNC 133
H +C + T IS S + IN + P H + NW C+C
Sbjct: 442 HKKCYPKVVTKCISKSSDSASSEYEKINHRIPHHFESHTNIGANWC-CHC 490
>SPAC824.09c |||GTPase activating protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 320
Score = 27.1 bits (57), Expect = 3.1
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = +2
Query: 305 RCDHLLPTLHAHLSSISSVQIFGWQQSQSKMWTR 406
RC + +L H+S + SV + W Q++ TR
Sbjct: 51 RCSGVHRSLGVHVSRVKSVDLDSWTDEQTENMTR 84
>SPCC1020.02 |spc7||kinetochore protein Spc7|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1364
Score = 26.6 bits (56), Expect = 4.1
Identities = 15/47 (31%), Positives = 22/47 (46%)
Frame = +1
Query: 448 QSYFGKISEENIKNNFVLIYELLDEILDFGYPQNSDTGVLKTFITQQ 588
+ + KI EE +K N +L YE D +S ++KTF Q
Sbjct: 952 KDFVTKIEEETLKENPLLFYEYRKASSDMRVLMDSQFLMMKTFARLQ 998
>SPAC30D11.05 |aps3||AP-3 adaptor complex subunit Aps3
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 165
Score = 26.6 bits (56), Expect = 4.1
Identities = 21/127 (16%), Positives = 54/127 (42%), Gaps = 8/127 (6%)
Frame = +1
Query: 181 MIGGLFVYNHKGEVLISRVYRDDIGRNAVDAFRVNVIHARQQVRSPV------TNI--AR 336
MI +F++N+KG+ +++ Y ++ + I+A R P +N+ +
Sbjct: 1 MIYAVFIFNNKGKPRLTKFYTPI--DESIQQKLIGDIYAAVSTRPPTACNFLESNLIAGK 58
Query: 337 TSFFHIKRANIWLAAVTKQNVDAAMVFEFLLKIIDVMQSYFGKISEENIKNNFVLIYELL 516
+ + A ++ V + + + + ++ + F + E ++ F I+ +L
Sbjct: 59 NRIIYRQYATLYFVFVVDEGESELGILDLIQVFVEALDRCFNNVCELDLVFKFQEIHAIL 118
Query: 517 DEILDFG 537
E++ G
Sbjct: 119 AEVVSGG 125
>SPCC320.11c ||SPCC330.18|RNA-binding protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 180
Score = 26.2 bits (55), Expect = 5.4
Identities = 11/37 (29%), Positives = 23/37 (62%)
Frame = +1
Query: 442 VMQSYFGKISEENIKNNFVLIYELLDEILDFGYPQNS 552
V++++ G+I+++ ++ V+IY + D L FG S
Sbjct: 113 VLKAHVGRITDDTPQHQGVVIYSMNDTPLGFGVTARS 149
>SPAC1002.05c |jmj2||histone demethylase Jmj2 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 715
Score = 26.2 bits (55), Expect = 5.4
Identities = 8/24 (33%), Positives = 13/24 (54%)
Frame = -1
Query: 387 CDCCQPNICTLDMEERCACNVGNR 316
C C +C L +E C C++ N+
Sbjct: 675 CSCKSITVCPLHIEYLCKCDLSNK 698
>SPAPB2B4.04c ||pmc1, pmc1|P-type ATPase, calcium transporting Pmc1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1292
Score = 26.2 bits (55), Expect = 5.4
Identities = 17/54 (31%), Positives = 24/54 (44%)
Frame = -3
Query: 571 SSGPQYQNSEGNQSPRSHQATHRSEQSYS*CSLQKSCQNTIASHQ*SSTGTQIP 410
SS P +SE NQ P S Q +Y+ ++ S + SS+GT P
Sbjct: 10 SSRPPSVHSERNQKPSSSQFLGVPSSNYNQRENSSRSGSSTISREPSSSGTMYP 63
>SPCP31B10.06 |mug190||C2 domain protein |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1188
Score = 25.8 bits (54), Expect = 7.1
Identities = 23/102 (22%), Positives = 49/102 (48%), Gaps = 11/102 (10%)
Frame = +1
Query: 271 AFRVNVIHARQQVRSPVTNIARTSFFHIKRANIWLAAVTKQNVDAAMVFEFLLKIIDVMQ 450
+ RVN+ + +S +N + T+ +H++ + + + +A+VFEF K +
Sbjct: 839 SIRVNIAGVKITAKSSTSNSSSTAEYHVRSRHAVIPVNNRYR--SAVVFEF-RKQLQRKH 895
Query: 451 SYFGKI----SEENIKNNF-VLIY------ELLDEILDFGYP 543
+ F + E+N++ N V I+ +L ++DF +P
Sbjct: 896 NVFAMVWLVDLEDNVEQNIRVPIFTSSKPAHVLQNMIDFDHP 937
>SPCC1259.11c |gyp2||GTPase activating protein Gyp2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 720
Score = 25.4 bits (53), Expect = 9.4
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = +2
Query: 308 CDHLLPTLHAHLSSISSVQIF 370
CD L+ LHA L SSV +F
Sbjct: 118 CDRLVRQLHASLEDASSVGLF 138
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,158,268
Number of Sequences: 5004
Number of extensions: 64632
Number of successful extensions: 184
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 176
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 182
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 385381248
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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