Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP11_FL5_C09
(792 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_0373 + 28374298-28374380,28375126-28375303,28375975-283760... 169 2e-42
01_06_0412 + 29159918-29160046,29160148-29160297,29160385-291604... 116 3e-26
05_06_0262 - 26746180-26746278,26746371-26746493,26746584-267467... 104 7e-23
07_03_1297 + 25587445-25587502,25587646-25587740,25588426-255886... 101 5e-22
05_04_0141 - 18364065-18364176,18364722-18364948,18365183-183653... 65 5e-11
03_06_0198 - 32299480-32299643,32300084-32300126,32300843-323009... 36 0.037
03_06_0413 + 33756151-33756475,33756837-33756945,33757004-337570... 32 0.45
02_05_0128 - 26059348-26059437,26059553-26059759 31 0.79
06_01_1145 - 9575173-9575553,9575712-9575858,9575971-9576024,957... 28 7.4
09_02_0475 + 9724676-9724936,9725518-9726216,9726273-9726596,972... 28 9.8
03_05_0686 + 26753253-26753389,26753618-26753745,26754370-267551... 28 9.8
>02_05_0373 +
28374298-28374380,28375126-28375303,28375975-28376065,
28376162-28376256,28376379-28376468,28376789-28376837,
28376941-28377079,28377224-28377340,28377437-28377527,
28377604-28377746,28378009-28378123,28378439-28378483,
28378565-28378645
Length = 438
Score = 169 bits (412), Expect = 2e-42
Identities = 86/205 (41%), Positives = 127/205 (61%), Gaps = 6/205 (2%)
Frame = +1
Query: 175 PTMIGGLFVYNHKGEVLISRVYRDDIGRNAVDAFRVNVIHARQQVRSPVTNIARTSFFHI 354
P ++ N +G+VLI+R+YRDD+G N VDAFR++++ ++ PV I SF ++
Sbjct: 2 PVAASAIYFLNLRGDVLINRLYRDDVGGNMVDAFRMHIMQTKELGTCPVRQIGGCSFLYM 61
Query: 355 KRANIWLAAVTKQNVDAAMVFEFLLKIIDVMQSYF-GKISEENIKNNFVLIYELLDEILD 531
+ +N+++ V N + A F+F+++ + + +SYF G E+ I+NNFVLIYELLDEI+D
Sbjct: 62 RISNVYIVIVVSSNANVACAFKFVVEAVALFKSYFGGAFDEDAIRNNFVLIYELLDEIMD 121
Query: 532 FGYPQNSDTGVLKTFITQQGIKS--ASKEEQAQI---TSQVTGXIGWRREGXSTDETXWS 696
FGYPQN +LK +ITQ+G++S +SK + T QVTG +GWRREG +
Sbjct: 122 FGYPQNLSPEILKLYITQEGVRSPFSSKPSDKPVPNATLQVTGAVGWRREGLMYKKNEVF 181
Query: 697 LMY*NYVNLLMSPQGQVXLLXWLGK 771
L VNLLMS +G V GK
Sbjct: 182 LDIVESVNLLMSSKGSVLRCDVTGK 206
>01_06_0412 +
29159918-29160046,29160148-29160297,29160385-29160447,
29160540-29160716,29160796-29160899,29162142-29162249,
29162336-29162432,29162540-29162637,29162718-29162859,
29162941-29163063,29163161-29163259
Length = 429
Score = 116 bits (278), Expect = 3e-26
Identities = 61/191 (31%), Positives = 105/191 (54%), Gaps = 3/191 (1%)
Frame = +1
Query: 184 IGGLFVYNHKGEVLISRVYRDDIGRNAVDAFRVNVIHAR--QQVRSPVT-NIARTSFFHI 354
+ LF+ + KG VL+ R YR D+ + F ++ + SPV + A ++ I
Sbjct: 5 VSALFLLDIKGRVLVWRDYRGDVSALQAERFFTKLLDKEGDSEAHSPVVYDDAGVTYMFI 64
Query: 355 KRANIWLAAVTKQNVDAAMVFEFLLKIIDVMQSYFGKISEENIKNNFVLIYELLDEILDF 534
+ N++L ++QN +AA + FL +++DV + YF ++ EE++++NFV++YELLDE++DF
Sbjct: 65 QHNNVFLLTASRQNCNAASILLFLHRVVDVFKHYFEELEEESLRDNFVVVYELLDEMMDF 124
Query: 535 GYPQNSDTGVLKTFITQQGIKSASKEEQAQITSQVTGXIGWRREGXSTDETXWSLMY*NY 714
GYPQ ++ +L FI + E + VT + WR EG + L
Sbjct: 125 GYPQYTEAKILSEFIKTDAYR---MEVSQRPPMAVTNAVSWRSEGIRYKKNEVFLDVVES 181
Query: 715 VNLLMSPQGQV 747
VN+L++ GQ+
Sbjct: 182 VNILVNSNGQI 192
>05_06_0262 -
26746180-26746278,26746371-26746493,26746584-26746725,
26746824-26746921,26747012-26747108,26747215-26747322,
26747900-26748003,26748170-26748268,26748373-26748435,
26748538-26748687,26748769-26748900
Length = 404
Score = 104 bits (250), Expect = 7e-23
Identities = 50/135 (37%), Positives = 85/135 (62%), Gaps = 3/135 (2%)
Frame = +1
Query: 184 IGGLFVYNHKGEVLISRVYRDDIGRNAVDAFRVNVIHARQ--QVRSPVTNI-ARTSFFHI 354
+ LF+ + KG VL+ R YR D+ + F ++ +V SPV + A S+ I
Sbjct: 6 VSALFLLDIKGRVLVWRDYRGDVSALQAERFFTKLLDKESDAEVLSPVVHDDAGVSYMFI 65
Query: 355 KRANIWLAAVTKQNVDAAMVFEFLLKIIDVMQSYFGKISEENIKNNFVLIYELLDEILDF 534
+ N++L ++QN +AA + FL +++DV + YF ++ EE++++NFV++YELLDE++DF
Sbjct: 66 QHNNVFLLTASRQNCNAASILLFLHRVVDVFKHYFEELEEESLRDNFVVVYELLDEMMDF 125
Query: 535 GYPQNSDTGVLKTFI 579
GYPQ ++ +L FI
Sbjct: 126 GYPQYTEAMILSEFI 140
>07_03_1297 +
25587445-25587502,25587646-25587740,25588426-25588629,
25588843-25588959,25589084-25589212,25589591-25589717,
25590174-25590277,25590369-25590473,25590969-25591190,
25591869-25591967
Length = 419
Score = 101 bits (243), Expect = 5e-22
Identities = 47/141 (33%), Positives = 86/141 (60%), Gaps = 3/141 (2%)
Frame = +1
Query: 181 MIGGLFVYNHKGEVLISRVYRDDIGRNAVDAF--RVNVIHARQQVRSP-VTNIARTSFFH 351
MI FV + +G+ ++ R YR ++ + + + F +V + + +P V N+ ++ H
Sbjct: 1 MISQFFVLSQRGDHIVFRDYRGEVPKGSAEIFFRKVKFWNDDEAEEAPPVFNVDGVNYIH 60
Query: 352 IKRANIWLAAVTKQNVDAAMVFEFLLKIIDVMQSYFGKISEENIKNNFVLIYELLDEILD 531
+K A ++ T NV +++ E L +I V + Y G ++E++++ NF+L+YELLDE++D
Sbjct: 61 VKVAGLFFVVTTMVNVSPSLLLELLQRIARVTKDYLGVLNEDSLRKNFILVYELLDEVID 120
Query: 532 FGYPQNSDTGVLKTFITQQGI 594
FGYPQ + T VLK++I + I
Sbjct: 121 FGYPQTTSTEVLKSYIFNEPI 141
>05_04_0141 -
18364065-18364176,18364722-18364948,18365183-18365390,
18365497-18365706,18366078-18366180,18366214-18366325,
18367061-18367204,18367835-18367936,18368081-18368186,
18368301-18368335
Length = 452
Score = 65.3 bits (152), Expect = 5e-11
Identities = 29/82 (35%), Positives = 48/82 (58%)
Frame = +1
Query: 415 FEFLLKIIDVMQSYFGKISEENIKNNFVLIYELLDEILDFGYPQNSDTGVLKTFITQQGI 594
F+FL ++ DV+ Y G ++E+ IK+NFVL+Y++LDE++D G+P ++ +LK I I
Sbjct: 98 FQFLSRVADVLTDYLGDLNEDIIKDNFVLVYQILDEMMDNGFPLTTEPNILKEMIAPPNI 157
Query: 595 KSASKEEQAQITSQVTGXIGWR 660
S +T + WR
Sbjct: 158 VSKMLN---VVTDAAASFVPWR 176
>03_06_0198 -
32299480-32299643,32300084-32300126,32300843-32300929,
32301063-32301098,32301187-32301295,32301408-32301499,
32302029-32302115,32303887-32304222
Length = 317
Score = 35.9 bits (79), Expect = 0.037
Identities = 20/59 (33%), Positives = 29/59 (49%)
Frame = +1
Query: 412 VFEFLLKIIDVMQSYFGKISEENIKNNFVLIYELLDEILDFGYPQNSDTGVLKTFITQQ 588
V E + ++V+ YFG + E ++ NF Y +LDEIL G Q S + I Q
Sbjct: 191 VLEIIHHFVEVLDRYFGSVCELDLIFNFHKAYYILDEILIAGELQESSKKNVARLIAAQ 249
>03_06_0413 +
33756151-33756475,33756837-33756945,33757004-33757058,
33757059-33757094,33757196-33757282,33757737-33757808
Length = 227
Score = 32.3 bits (70), Expect = 0.45
Identities = 19/56 (33%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Frame = +1
Query: 463 KISEENIKNNFVLIYELLDEILDFGYPQNSD-TGVLKTFITQQGIKSASKEEQAQI 627
++ E ++ NF Y +LDE+L G Q S+ VL+ TQ + A+KEE + +
Sbjct: 163 QVCELDLIFNFHKAYFILDEVLIAGELQESNKKAVLRLITTQDNLVEAAKEEASSL 218
>02_05_0128 - 26059348-26059437,26059553-26059759
Length = 98
Score = 31.5 bits (68), Expect = 0.79
Identities = 18/60 (30%), Positives = 30/60 (50%)
Frame = +1
Query: 157 KECEASPTMIGGLFVYNHKGEVLISRVYRDDIGRNAVDAFRVNVIHARQQVRSPVTNIAR 336
KE E +GGL + E I DD+G++ V++FR V + VR+ + N+ +
Sbjct: 27 KELEWRKAQLGGLIRMITEEEDAIFDALHDDLGKHRVESFRDEVGVLAKSVRNTLQNLKK 86
>06_01_1145 -
9575173-9575553,9575712-9575858,9575971-9576024,
9576692-9576862,9577004-9577231,9577392-9577478,
9577600-9577761
Length = 409
Score = 28.3 bits (60), Expect = 7.4
Identities = 17/64 (26%), Positives = 26/64 (40%), Gaps = 3/64 (4%)
Frame = -3
Query: 352 YGRKMCVQCW*QVIAPAGEHGSHSL*MRPQHYDQYHLGRLS---RSTPRLYGYKRTSPRS 182
YG K+ + W IA +G+ L + YD L + + P +YG +T
Sbjct: 172 YGTKVTINVWQPTIATSGDFSLSQLWISAGSYDNKDLNTIETGWQVYPAMYGDDKTRLFI 231
Query: 181 LWVR 170
W R
Sbjct: 232 YWTR 235
>09_02_0475 +
9724676-9724936,9725518-9726216,9726273-9726596,
9726900-9727847
Length = 743
Score = 27.9 bits (59), Expect = 9.8
Identities = 15/63 (23%), Positives = 28/63 (44%)
Frame = -2
Query: 473 SEILPKYDCITSMIFNRNSNTMAASTFCFVTAASQIFARLIWKKDVRAMLVTGDRTCWRA 294
S IL + DC + + F + +S+ C + ++A W D++ +L C R
Sbjct: 205 SHILNRSDCPSYLKFKDCIEEILSSSSCLIVLDGLLYANEHWLPDLKYVLGETKHKCTRF 264
Query: 293 WIT 285
+T
Sbjct: 265 IVT 267
>03_05_0686 +
26753253-26753389,26753618-26753745,26754370-26755196,
26756016-26756690
Length = 588
Score = 27.9 bits (59), Expect = 9.8
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = -2
Query: 476 SSEILPKYDCITSMIFNRNSNTMAASTFCFVT 381
+++I P YD ITS I N + + C+VT
Sbjct: 401 TTDIAPGYDHITSAIGAANIGALGTALLCYVT 432
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,508,039
Number of Sequences: 37544
Number of extensions: 422540
Number of successful extensions: 881
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 857
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 879
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2138915688
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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