Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP11_FL5_C03
(803 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024744-4|AAK72071.3| 1192|Caenorhabditis elegans Hypothetical ... 31 0.97
U00046-6|AAN65305.1| 422|Caenorhabditis elegans Mammalian zak k... 31 1.3
U00046-5|AAC47047.4| 516|Caenorhabditis elegans Mammalian zak k... 31 1.3
U20861-16|AAA62300.1| 331|Caenorhabditis elegans Dynactin compl... 30 2.2
Z78415-7|CAH60759.1| 844|Caenorhabditis elegans Hypothetical pr... 29 2.9
Z78415-5|CAB01670.1| 925|Caenorhabditis elegans Hypothetical pr... 29 2.9
Z75712-6|CAB00048.1| 1188|Caenorhabditis elegans Hypothetical pr... 29 2.9
Z75712-5|CAB00045.1| 1186|Caenorhabditis elegans Hypothetical pr... 29 2.9
AL132862-11|CAB60541.1| 396|Caenorhabditis elegans Hypothetical... 29 2.9
AF013950-1|AAC47747.1| 1186|Caenorhabditis elegans APR-1 protein. 29 2.9
L14730-2|AAB37562.2| 187|Caenorhabditis elegans C.elegans homeo... 28 6.8
AY647457-1|AAT67384.1| 187|Caenorhabditis elegans homeobox gene... 28 6.8
Z70682-8|CAA94583.2| 385|Caenorhabditis elegans Hypothetical pr... 28 9.0
>AC024744-4|AAK72071.3| 1192|Caenorhabditis elegans Hypothetical
protein Y108G3AL.7 protein.
Length = 1192
Score = 31.1 bits (67), Expect = 0.97
Identities = 14/38 (36%), Positives = 23/38 (60%)
Frame = +3
Query: 573 SNPEFHTPTTPDLTSISINPLNAVLKXVRARGLSLRWS 686
++ +F TP TP L+ +I L+ VLK +RA+ W+
Sbjct: 1013 AHQDFFTPDTPRLSPSAIQDLDKVLKKIRAKTHYTGWN 1050
>U00046-6|AAN65305.1| 422|Caenorhabditis elegans Mammalian zak
kinase homolog protein1, isoform b protein.
Length = 422
Score = 30.7 bits (66), Expect = 1.3
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +3
Query: 222 GTVSSTFDHPFSTPVLRSYWHRNQ 293
G +++ F H S+P LR +WHR Q
Sbjct: 306 GHLNNGFHHTTSSPQLRGFWHRKQ 329
>U00046-5|AAC47047.4| 516|Caenorhabditis elegans Mammalian zak
kinase homolog protein1, isoform a protein.
Length = 516
Score = 30.7 bits (66), Expect = 1.3
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +3
Query: 222 GTVSSTFDHPFSTPVLRSYWHRNQ 293
G +++ F H S+P LR +WHR Q
Sbjct: 400 GHLNNGFHHTTSSPQLRGFWHRKQ 423
>U20861-16|AAA62300.1| 331|Caenorhabditis elegans Dynactin complex
component protein2 protein.
Length = 331
Score = 29.9 bits (64), Expect = 2.2
Identities = 17/50 (34%), Positives = 28/50 (56%)
Frame = +3
Query: 552 SATSTRSSNPEFHTPTTPDLTSISINPLNAVLKXVRARGLSLRWSSXAPS 701
+A+ + S PE PT PD+ IS++ ++ LK + R L+L S + S
Sbjct: 15 AASQVQKSEPENDNPTHPDIELISVD-VDEALKKYKNRVLNLTSSDFSDS 63
>Z78415-7|CAH60759.1| 844|Caenorhabditis elegans Hypothetical
protein C17G1.4b protein.
Length = 844
Score = 29.5 bits (63), Expect = 2.9
Identities = 21/67 (31%), Positives = 30/67 (44%)
Frame = +3
Query: 405 PQNTSHS*PLLDYC*RHS*RSQCAGHPFILSHYYWRSRPYASSHPPLAISATSTRSSNPE 584
P TSH PLL RSQ P I ++ S+P S P + +++ +S P
Sbjct: 647 PSQTSHGPPLLS-------RSQSMHTPMISPNFN-ASQPSTSGRQPAKKARSASDASEPP 698
Query: 585 FHTPTTP 605
F+ P P
Sbjct: 699 FNVPHPP 705
>Z78415-5|CAB01670.1| 925|Caenorhabditis elegans Hypothetical
protein C17G1.4a protein.
Length = 925
Score = 29.5 bits (63), Expect = 2.9
Identities = 21/67 (31%), Positives = 30/67 (44%)
Frame = +3
Query: 405 PQNTSHS*PLLDYC*RHS*RSQCAGHPFILSHYYWRSRPYASSHPPLAISATSTRSSNPE 584
P TSH PLL RSQ P I ++ S+P S P + +++ +S P
Sbjct: 647 PSQTSHGPPLLS-------RSQSMHTPMISPNFN-ASQPSTSGRQPAKKARSASDASEPP 698
Query: 585 FHTPTTP 605
F+ P P
Sbjct: 699 FNVPHPP 705
>Z75712-6|CAB00048.1| 1188|Caenorhabditis elegans Hypothetical protein
K04G2.8b protein.
Length = 1188
Score = 29.5 bits (63), Expect = 2.9
Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 5/72 (6%)
Frame = +3
Query: 225 TVSSTFDHPFSTPVLRSYWHRNQIEQCHCAITTERLLHH---KRLP--RRVSCQS*GCRF 389
T S + HP ++P+ +S HR Q + A +RLL +P R +S + G +
Sbjct: 807 TSSPAWSHPDTSPIPKSSSHRTQPNRRQDASDADRLLMESIMSEMPKSRIISPRLAGTQQ 866
Query: 390 SFRP*PQNTSHS 425
P P+ SHS
Sbjct: 867 YLEPEPERRSHS 878
>Z75712-5|CAB00045.1| 1186|Caenorhabditis elegans Hypothetical protein
K04G2.8a protein.
Length = 1186
Score = 29.5 bits (63), Expect = 2.9
Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 5/72 (6%)
Frame = +3
Query: 225 TVSSTFDHPFSTPVLRSYWHRNQIEQCHCAITTERLLHH---KRLP--RRVSCQS*GCRF 389
T S + HP ++P+ +S HR Q + A +RLL +P R +S + G +
Sbjct: 805 TSSPAWSHPDTSPIPKSSSHRTQPNRRQDASDADRLLMESIMSEMPKSRIISPRLAGTQQ 864
Query: 390 SFRP*PQNTSHS 425
P P+ SHS
Sbjct: 865 YLEPEPERRSHS 876
>AL132862-11|CAB60541.1| 396|Caenorhabditis elegans Hypothetical
protein Y73F8A.16 protein.
Length = 396
Score = 29.5 bits (63), Expect = 2.9
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +1
Query: 253 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRD 357
F L F++TG E KS V + S+ +I GYR+
Sbjct: 37 FPELNFNITGLEEKSRYVVLLSIEKYDNIRYGYRN 71
>AF013950-1|AAC47747.1| 1186|Caenorhabditis elegans APR-1 protein.
Length = 1186
Score = 29.5 bits (63), Expect = 2.9
Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 5/72 (6%)
Frame = +3
Query: 225 TVSSTFDHPFSTPVLRSYWHRNQIEQCHCAITTERLLHH---KRLP--RRVSCQS*GCRF 389
T S + HP ++P+ +S HR Q + A +RLL +P R +S + G +
Sbjct: 805 TSSPAWSHPDTSPIPKSSSHRTQPNRRQDASDADRLLMESIMSEMPKSRIISPRLAGTQQ 864
Query: 390 SFRP*PQNTSHS 425
P P+ SHS
Sbjct: 865 YLEPEPERRSHS 876
>L14730-2|AAB37562.2| 187|Caenorhabditis elegans C.elegans homeobox
protein 16 protein.
Length = 187
Score = 28.3 bits (60), Expect = 6.8
Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +3
Query: 513 SRPYASSHPPLAISATSTRSSNPEFHTPT-TPDLTS 617
S PY P ++ ATS S +P F +P TP++ S
Sbjct: 12 SSPYPCPSPTISTPATSPSSISPTFASPNGTPNIAS 47
>AY647457-1|AAT67384.1| 187|Caenorhabditis elegans homeobox gene 16
protein.
Length = 187
Score = 28.3 bits (60), Expect = 6.8
Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +3
Query: 513 SRPYASSHPPLAISATSTRSSNPEFHTPT-TPDLTS 617
S PY P ++ ATS S +P F +P TP++ S
Sbjct: 12 SSPYPCPSPTISTPATSPSSISPTFASPNGTPNIAS 47
>Z70682-8|CAA94583.2| 385|Caenorhabditis elegans Hypothetical
protein F08G5.1 protein.
Length = 385
Score = 27.9 bits (59), Expect = 9.0
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +3
Query: 525 ASSHPPLAISATSTRSSNPEFHTPTTPDLTSISINPLNAV 644
+SSH S+ + S P+FH+P P I I+ LN V
Sbjct: 250 SSSHSSQLSSSPANAPSFPDFHSP--PSANDIQIDQLNPV 287
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,235,989
Number of Sequences: 27780
Number of extensions: 388428
Number of successful extensions: 1249
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1159
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1248
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1966828226
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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