Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP11_FL5_C01
(806 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X16660-1|CAA34646.1| 223|Homo sapiens p25 protein protein. 33 1.6
AK128423-1|BAC87434.1| 135|Homo sapiens protein ( Homo sapiens ... 31 3.7
BC009373-1|AAH09373.1| 297|Homo sapiens phytanoyl-CoA dioxygena... 31 4.9
AL672142-7|CAI10843.1| 297|Homo sapiens phytanoyl-CoA dioxygena... 31 4.9
AK096678-1|BAC04838.1| 738|Homo sapiens protein ( Homo sapiens ... 31 6.5
AB002340-1|BAA20800.3| 2467|Homo sapiens KIAA0342 protein protein. 31 6.5
DQ993201-1|ABJ97706.1| 921|Homo sapiens extended-synaptotagmin ... 30 8.6
BX640618-1|CAE45772.1| 120|Homo sapiens hypothetical protein pr... 30 8.6
>X16660-1|CAA34646.1| 223|Homo sapiens p25 protein protein.
Length = 223
Score = 32.7 bits (71), Expect = 1.6
Identities = 21/53 (39%), Positives = 28/53 (52%)
Frame = -3
Query: 456 PIGGMRPLRVQSRWERTAAPALRPGHRRGPEPRSIGCPSRPRVDKSGQADLRA 298
P G P R Q++ + P LRP HR +PRS G P+ PR + + D RA
Sbjct: 18 PSGPRPPSRSQAQTPPRSVPRLRPRHRHPQDPRSPG-PA-PRHRRPPRPDPRA 68
>AK128423-1|BAC87434.1| 135|Homo sapiens protein ( Homo sapiens
cDNA FLJ46566 fis, clone THYMU3040829, moderately
similar to Cold-inducible RNA-binding protein. ).
Length = 135
Score = 31.5 bits (68), Expect = 3.7
Identities = 17/31 (54%), Positives = 18/31 (58%)
Frame = -3
Query: 459 PPIGGMRPLRVQSRWERTAAPALRPGHRRGP 367
PP RPL RW TA P+ RPG RRGP
Sbjct: 87 PPANPSRPLSPVCRW--TADPS-RPGRRRGP 114
>BC009373-1|AAH09373.1| 297|Homo sapiens phytanoyl-CoA dioxygenase
domain containing 1 protein.
Length = 297
Score = 31.1 bits (67), Expect = 4.9
Identities = 24/80 (30%), Positives = 31/80 (38%)
Frame = +1
Query: 256 VRTPRPCPSTDFAASSQIGLPRLVHSWTRGATDASRLRPAPVSWP*CWSGSSLPTTLHPQ 435
+RTP C + +A G + W R A S L P PV WSG L L P
Sbjct: 149 IRTPPSCTRSPWAGCWACGSQWRMPRW-RTAVSGSSLAPTPVVCQGGWSGPLLAQRLVPA 207
Query: 436 RPHSTNRWXRAXQAYSPPRC 495
+ A + PP+C
Sbjct: 208 SLGQSQPGITA--SLCPPQC 225
>AL672142-7|CAI10843.1| 297|Homo sapiens phytanoyl-CoA dioxygenase
domain containing 1 protein.
Length = 297
Score = 31.1 bits (67), Expect = 4.9
Identities = 24/80 (30%), Positives = 31/80 (38%)
Frame = +1
Query: 256 VRTPRPCPSTDFAASSQIGLPRLVHSWTRGATDASRLRPAPVSWP*CWSGSSLPTTLHPQ 435
+RTP C + +A G + W R A S L P PV WSG L L P
Sbjct: 149 IRTPPSCTRSPWAGCWACGSQWRMPRW-RTAVSGSSLAPTPVVCQEGWSGPLLAQRLVPA 207
Query: 436 RPHSTNRWXRAXQAYSPPRC 495
+ A + PP+C
Sbjct: 208 SLGQSQPGITA--SLCPPQC 225
>AK096678-1|BAC04838.1| 738|Homo sapiens protein ( Homo sapiens
cDNA FLJ39359 fis, clone PEBLM2004290. ).
Length = 738
Score = 30.7 bits (66), Expect = 6.5
Identities = 22/79 (27%), Positives = 38/79 (48%), Gaps = 2/79 (2%)
Frame = +3
Query: 15 KGVTCVTPAVLASAVHILKLERYRED*HGPCARMTRKIVKRSTFFRCPRIKRELNELEA- 191
KG T PA++ + L+ E P R+T ++ K+ RCP K + +E+ +
Sbjct: 505 KGRTAYNPALIWKEIKSF-LKGSFEALSCPHGRLTEEVYKKLGRKRCPNFKEDRSEIYSL 563
Query: 192 -EMAAKISSYRGYAWEERI 245
+ +I S +GY EE +
Sbjct: 564 FSLYQQIRSQKGYFDEEDV 582
>AB002340-1|BAA20800.3| 2467|Homo sapiens KIAA0342 protein protein.
Length = 2467
Score = 30.7 bits (66), Expect = 6.5
Identities = 22/79 (27%), Positives = 38/79 (48%), Gaps = 2/79 (2%)
Frame = +3
Query: 15 KGVTCVTPAVLASAVHILKLERYRED*HGPCARMTRKIVKRSTFFRCPRIKRELNELEA- 191
KG T PA++ + L+ E P R+T ++ K+ RCP K + +E+ +
Sbjct: 834 KGRTAYNPALIWKEIKSF-LKGSFEALSCPHGRLTEEVYKKLGRKRCPNFKEDRSEIYSL 892
Query: 192 -EMAAKISSYRGYAWEERI 245
+ +I S +GY EE +
Sbjct: 893 FSLYQQIRSQKGYFDEEDV 911
>DQ993201-1|ABJ97706.1| 921|Homo sapiens extended-synaptotagmin 2
protein.
Length = 921
Score = 30.3 bits (65), Expect = 8.6
Identities = 21/55 (38%), Positives = 24/55 (43%), Gaps = 1/55 (1%)
Frame = -3
Query: 495 APGRRVGLXRSXPPIGGMRPLRVQSRWERTAAPAL-RPGHRRGPEPRSIGCPSRP 334
APG R+G R G+R R +R A L RPG R P P G P P
Sbjct: 52 APGSRLGARRRAKTARGLRGHR-----QRGAGAGLSRPGSARAPSPPRPGGPENP 101
>BX640618-1|CAE45772.1| 120|Homo sapiens hypothetical protein
protein.
Length = 120
Score = 30.3 bits (65), Expect = 8.6
Identities = 18/50 (36%), Positives = 22/50 (44%), Gaps = 1/50 (2%)
Frame = -3
Query: 489 GRRVGLXRSXPPIGGMRPLRV-QSRWERTAAPALRPGHRRGPEPRSIGCP 343
GR G+ R P + G L + R R PGHR PEP S+ P
Sbjct: 25 GRLSGVDRRCPQLTGSMTLEEWKLRQSRDVRVNCSPGHRWRPEPSSLRAP 74
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 110,151,365
Number of Sequences: 237096
Number of extensions: 2507616
Number of successful extensions: 7171
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 6298
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7151
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9980595722
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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