Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP11_FL5_C01
         (806 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF237761-2|AAF81411.1|  908|Drosophila melanogaster unknown prot...    36   0.049
X71974-1|CAA50794.1|  196|Drosophila melanogaster GCR 17 protein.      27   0.91 
M22874-2|AAA28675.1|  916|Drosophila melanogaster protein ( D.me...    31   1.4  
AY089343-1|AAL90081.2|  718|Drosophila melanogaster AT16518p pro...    31   1.4  
BT015262-1|AAT94491.1| 1280|Drosophila melanogaster LD40317p pro...    31   2.5  
AE014297-467|AAF54121.2| 1280|Drosophila melanogaster CG9727-PA ...    31   2.5  
BT025124-1|ABE73295.1|  510|Drosophila melanogaster IP09286p pro...    30   3.2  

>AF237761-2|AAF81411.1|  908|Drosophila melanogaster unknown
           protein.
          Length = 908

 Score = 36.3 bits (80), Expect = 0.049
 Identities = 26/100 (26%), Positives = 43/100 (43%), Gaps = 1/100 (1%)
 Frame = +3

Query: 120 RKIVKRSTFFRCPRIKRELNELEAEMAAKISSYRGYAWEERIEEAR-EDPSSVSLHRLCR 296
           R++  R    R P  K E N   + +   +  ++   ++ER+     E  ++ SL +  R
Sbjct: 308 RRLRTRWMRSRHPSDKTEWNRALSRLRCALVLHKAAWFDERLANTGVESEATHSLWKATR 367

Query: 297 QLSNRPAPTCPLVDERGNRCFSAQARAGVLAVMLERQFAP 416
            +  R     PLVD  G  C +   +A V A  L  +F P
Sbjct: 368 AIKRRCTRKAPLVDSNGTWCRTDLGQAEVFAAHLAERFQP 407


>X71974-1|CAA50794.1|  196|Drosophila melanogaster GCR 17 protein.
          Length = 196

 Score = 27.1 bits (57), Expect(2) = 0.91
 Identities = 9/10 (90%), Positives = 10/10 (100%)
 Frame = +1

Query: 181 SWKRRWRRRL 210
           SW+RRWRRRL
Sbjct: 26  SWRRRWRRRL 35



 Score = 23.8 bits (49), Expect(2) = 0.91
 Identities = 9/20 (45%), Positives = 10/20 (50%)
 Frame = +1

Query: 184 WKRRWRRRLAPIGAMRGRNG 243
           W+RRWR R A      G  G
Sbjct: 37  WRRRWRHRTAAAEQAGGLGG 56


>M22874-2|AAA28675.1|  916|Drosophila melanogaster protein (
           D.melanogaster LINEelement J-1, clone J-1. ).
          Length = 916

 Score = 31.5 bits (68), Expect = 1.4
 Identities = 15/55 (27%), Positives = 29/55 (52%)
 Frame = +3

Query: 267 SSVSLHRLCRQLSNRPAPTCPLVDERGNRCFSAQARAGVLAVMLERQFAPNDSAP 431
           ++ SL R+ ++   +P P   + +  G  C ++  +  V A  LE++F P + AP
Sbjct: 360 TNYSLWRITKRFKAQPTPKSAIKNPSGGWCRTSLEKTEVFANNLEQRFTPYNYAP 414


>AY089343-1|AAL90081.2|  718|Drosophila melanogaster AT16518p
           protein.
          Length = 718

 Score = 31.5 bits (68), Expect = 1.4
 Identities = 15/55 (27%), Positives = 29/55 (52%)
 Frame = +3

Query: 267 SSVSLHRLCRQLSNRPAPTCPLVDERGNRCFSAQARAGVLAVMLERQFAPNDSAP 431
           ++ SL R+ ++   +P P   + +  G  C ++  +  V A  LE++F P + AP
Sbjct: 162 TNYSLWRITKRFKAQPTPKSAIKNPSGGWCRTSLEKTEVFANNLEQRFTPYNYAP 216


>BT015262-1|AAT94491.1| 1280|Drosophila melanogaster LD40317p
           protein.
          Length = 1280

 Score = 30.7 bits (66), Expect = 2.5
 Identities = 16/52 (30%), Positives = 27/52 (51%)
 Frame = +1

Query: 289 FAASSQIGLPRLVHSWTRGATDASRLRPAPVSWP*CWSGSSLPTTLHPQRPH 444
           F+ + Q+GL +++H+   GAT      P PV+     +  S PT   P+ P+
Sbjct: 156 FSTAQQLGLGKIMHAMG-GATAGVPSAPVPVTTTPATAAPSTPTIAGPRHPN 206


>AE014297-467|AAF54121.2| 1280|Drosophila melanogaster CG9727-PA
           protein.
          Length = 1280

 Score = 30.7 bits (66), Expect = 2.5
 Identities = 16/52 (30%), Positives = 27/52 (51%)
 Frame = +1

Query: 289 FAASSQIGLPRLVHSWTRGATDASRLRPAPVSWP*CWSGSSLPTTLHPQRPH 444
           F+ + Q+GL +++H+   GAT      P PV+     +  S PT   P+ P+
Sbjct: 156 FSTAQQLGLGKIMHAMG-GATAGVPSAPVPVTTTPATAAPSTPTIAGPRHPN 206


>BT025124-1|ABE73295.1|  510|Drosophila melanogaster IP09286p
           protein.
          Length = 510

 Score = 30.3 bits (65), Expect = 3.2
 Identities = 21/74 (28%), Positives = 33/74 (44%), Gaps = 1/74 (1%)
 Frame = +3

Query: 171 ELNELEAEMAAKISSYRGYAWEERIEEAREDPSSVSLHRLCRQLSNRPAPTCPLVDERGN 350
           E   +EAE  A+ +  +  A E+R+ E  + P   + H       ++P P+ P   +  N
Sbjct: 279 EQRVIEAEERAEEAEDKVRAMEQRLSEWPKPPPQQAQHPHSHSHPHQPIPSHPQEQQAKN 338

Query: 351 RCF-SAQARAGVLA 389
            C  S QA  G  A
Sbjct: 339 HCSPSHQASGGATA 352


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,592,403
Number of Sequences: 53049
Number of extensions: 694175
Number of successful extensions: 2133
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1981
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2126
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3777934368
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)