Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP11_FL5_B19
(814 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_03_0366 - 13102147-13102281,13102560-13102739,13102791-131029... 32 0.47
04_04_1149 + 31273203-31273695,31274016-31275165,31275617-31277078 31 1.4
11_06_0411 - 23230580-23230795,23231407-23231862,23232142-232321... 30 1.9
03_01_0515 - 3864796-3865425 30 2.5
02_04_0021 + 18975992-18976408 30 2.5
11_06_0610 - 25449085-25453284 29 3.3
08_02_1291 + 25930056-25930067,25930289-25930334,25930434-259305... 29 3.3
03_02_0347 - 7676510-7677832 29 3.3
01_06_0046 + 25943183-25943590 29 3.3
09_02_0080 - 4020020-4020047,4020160-4022044,4022079-4022817 29 4.4
08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,336... 29 5.8
09_02_0426 + 9176147-9176297,9177118-9177624,9177985-9178715 28 7.7
08_01_0539 + 4679392-4681282,4682060-4682104,4682403-4683560,468... 28 7.7
07_03_0809 - 21669632-21669637,21669871-21670131,21670573-216707... 28 7.7
03_02_0765 + 11000724-11002496 28 7.7
01_07_0188 - 41866689-41866763,41866889-41867155,41867277-418677... 28 7.7
>05_03_0366 -
13102147-13102281,13102560-13102739,13102791-13102992,
13104385-13104575
Length = 235
Score = 32.3 bits (70), Expect = 0.47
Identities = 21/56 (37%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Frame = -1
Query: 310 HQPSAAAPFPCVPTQSFVDPIHLKICQYPHGGLGLTNVSMSQM-QGQVDYDFGVGG 146
H P AAA P VP++ P L + GG GL S S + G + D G+GG
Sbjct: 7 HSPRAAAAAPSVPSR-LPRPFLLSLSSPSRGGSGLVAASASAVAAGGSEGDGGIGG 61
>04_04_1149 + 31273203-31273695,31274016-31275165,31275617-31277078
Length = 1034
Score = 30.7 bits (66), Expect = 1.4
Identities = 17/48 (35%), Positives = 18/48 (37%)
Frame = -3
Query: 791 GGGGRXXTXAGGXGXAXGGXXXXLGXXRGXARXIWXXXXXXPXRXXGG 648
GGGGR GG G GG G G +W P R GG
Sbjct: 94 GGGGRGYESGGGRGPGGGGRGHESGGGGGRGGNVW----AQPGRGRGG 137
>11_06_0411 -
23230580-23230795,23231407-23231862,23232142-23232195,
23232251-23232367
Length = 280
Score = 30.3 bits (65), Expect = 1.9
Identities = 16/39 (41%), Positives = 22/39 (56%)
Frame = +1
Query: 208 VRVHRADTGRSSNELDRQTTELERRGMGLQHLAGVLGTL 324
V+ H + R S EL+RQ ELER+G L+ G L +
Sbjct: 89 VQRHGEELERQSRELERQREELERQGRELKMKDGKLNRM 127
>03_01_0515 - 3864796-3865425
Length = 209
Score = 29.9 bits (64), Expect = 2.5
Identities = 12/29 (41%), Positives = 13/29 (44%)
Frame = +1
Query: 706 PRXXPRXXXXPPXAXPXPPAXVXXLPPPP 792
P P PP P PP+ V PPPP
Sbjct: 91 PPPPPAASPPPPPPSPPPPSPVKSSPPPP 119
>02_04_0021 + 18975992-18976408
Length = 138
Score = 29.9 bits (64), Expect = 2.5
Identities = 13/34 (38%), Positives = 15/34 (44%)
Frame = +1
Query: 706 PRXXPRXXXXPPXAXPXPPAXVXXLPPPPASXXG 807
P P+ PP P PPA PPP A+ G
Sbjct: 98 PPPKPKPTPPPPAPTPKPPAPSPSPPPPKAAGHG 131
>11_06_0610 - 25449085-25453284
Length = 1399
Score = 29.5 bits (63), Expect = 3.3
Identities = 14/32 (43%), Positives = 16/32 (50%)
Frame = +1
Query: 697 RAXPRXXPRXXXXPPXAXPXPPAXVXXLPPPP 792
++ P P PP P PPA V LPPPP
Sbjct: 1166 KSPPPPAPVISPPPPVKSPPPPAPVI-LPPPP 1196
Score = 29.5 bits (63), Expect = 3.3
Identities = 14/32 (43%), Positives = 16/32 (50%)
Frame = +1
Query: 697 RAXPRXXPRXXXXPPXAXPXPPAXVXXLPPPP 792
++ P P PP P PPA V LPPPP
Sbjct: 1198 KSPPPPAPVISPPPPVKSPPPPAPVI-LPPPP 1228
Score = 28.7 bits (61), Expect = 5.8
Identities = 14/29 (48%), Positives = 14/29 (48%)
Frame = +1
Query: 706 PRXXPRXXXXPPXAXPXPPAXVXXLPPPP 792
P P PP P PPA V LPPPP
Sbjct: 1137 PPPVPVSSPPPPEKSPPPPAPVI-LPPPP 1164
Score = 28.7 bits (61), Expect = 5.8
Identities = 13/34 (38%), Positives = 15/34 (44%)
Frame = +1
Query: 697 RAXPRXXPRXXXXPPXAXPXPPAXVXXLPPPPAS 798
++ P P PP P PPA V PPP S
Sbjct: 1214 KSPPPPAPVILPPPPVKSPPPPAPVISPPPPEKS 1247
Score = 28.3 bits (60), Expect = 7.7
Identities = 13/34 (38%), Positives = 15/34 (44%)
Frame = +1
Query: 697 RAXPRXXPRXXXXPPXAXPXPPAXVXXLPPPPAS 798
++ P P PP P PPA V PPP S
Sbjct: 1150 KSPPPPAPVILPPPPIKSPPPPAPVISPPPPVKS 1183
Score = 28.3 bits (60), Expect = 7.7
Identities = 13/34 (38%), Positives = 15/34 (44%)
Frame = +1
Query: 697 RAXPRXXPRXXXXPPXAXPXPPAXVXXLPPPPAS 798
++ P P PP P PPA V PPP S
Sbjct: 1182 KSPPPPAPVILPPPPVKSPPPPAPVISPPPPVKS 1215
>08_02_1291 +
25930056-25930067,25930289-25930334,25930434-25930546,
25930645-25930930,25931357-25931421,25931642-25931693,
25931774-25931883,25932611-25932641,25932853-25933004,
25934622-25934840
Length = 361
Score = 29.5 bits (63), Expect = 3.3
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = -1
Query: 223 HGGLGLTNVSMSQMQGQVDYDFGVGGRLPI 134
+GG L ++Q G Y +G GGRLP+
Sbjct: 100 YGGPALPRYGIAQFPGGSGYPYGYGGRLPM 129
>03_02_0347 - 7676510-7677832
Length = 440
Score = 29.5 bits (63), Expect = 3.3
Identities = 33/123 (26%), Positives = 55/123 (44%), Gaps = 6/123 (4%)
Frame = +2
Query: 35 WLPFLLTCAIASA-AECENATSLSLMIDSLLATYDRESPPDSKIVVNLTLHLRHANIRES 211
WLP L CA+A A A +ATS SL+ + PP + + + L + + ++
Sbjct: 12 WLPAAL-CALALALAPASDATSASLVGINYGRVGSNLPPPQAVLPLLEGLGIGRVRLYDA 70
Query: 212 ESTV-----RILADLQMNWIDKRLSWNAGEWGCSTWLVSSERXWRPDVVLLNAAATTAGD 376
+ V + +L + D+ L+ A G +WL S+ + PD + AA T G+
Sbjct: 71 DPAVLHAFAKTGVELFVGVPDQSLAGLADPGGADSWLRSNVMPFLPDTKI---AALTVGN 127
Query: 377 YXL 385
L
Sbjct: 128 EVL 130
>01_06_0046 + 25943183-25943590
Length = 135
Score = 29.5 bits (63), Expect = 3.3
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = +1
Query: 736 PPXAXPXPPAXVXXLPPPPASXXG 807
PP A P PP PPPPA G
Sbjct: 51 PPPALPPPPPYYYYSPPPPAYYPG 74
>09_02_0080 - 4020020-4020047,4020160-4022044,4022079-4022817
Length = 883
Score = 29.1 bits (62), Expect = 4.4
Identities = 12/30 (40%), Positives = 13/30 (43%)
Frame = +1
Query: 706 PRXXPRXXXXPPXAXPXPPAXVXXLPPPPA 795
P PR P P PPA +P PPA
Sbjct: 354 PAPHPRVPRAPAPPVPAPPAPTPPIPTPPA 383
>08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,
33643-34147,34250-34358,34436-34548,34619-34806,
35481-36129,36169-36691,36760-36911,37042-37141,
37301-37416
Length = 1530
Score = 28.7 bits (61), Expect = 5.8
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = +1
Query: 706 PRXXPRXXXXPPXAXPXPPAXVXXLPPPP 792
P P PP P PP LPPPP
Sbjct: 1155 PCQPPLPPSPPPATPPPPPPLSPSLPPPP 1183
>09_02_0426 + 9176147-9176297,9177118-9177624,9177985-9178715
Length = 462
Score = 28.3 bits (60), Expect = 7.7
Identities = 23/71 (32%), Positives = 30/71 (42%)
Frame = +1
Query: 187 ETC*HS*VRVHRADTGRSSNELDRQTTELERRGMGLQHLAGVLGTLVEA*RGTAKRGCNH 366
E C + V V + D RS L T++ ++ G H A L T +E G R C H
Sbjct: 57 EKCKNVEVNVQQEDQQRSIPLLLYLTSQSDKNGSTPLHFAASLKTSIE---GFTSRLCEH 113
Query: 367 RRGLXSPXPCL 399
R SP L
Sbjct: 114 FRPKQSPTTLL 124
>08_01_0539 +
4679392-4681282,4682060-4682104,4682403-4683560,
4683834-4684204,4684290-4684835,4684927-4685027,
4685117-4685933,4686025-4686213,4686313-4686384,
4686477-4686587,4686647-4686652,4686694-4686794,
4687714-4687813,4687891-4687986,4688157-4688273,
4688367-4688492,4688566-4688619,4688745-4688992,
4689087-4689195,4689284-4689583,4689799-4689963
Length = 2240
Score = 28.3 bits (60), Expect = 7.7
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = +1
Query: 706 PRXXPRXXXXPPXAXPXPPAXVXXLPPPP 792
P P PP P PP LPPPP
Sbjct: 428 PPLPPPPPPPPPPPPPLPPNMPPPLPPPP 456
>07_03_0809 -
21669632-21669637,21669871-21670131,21670573-21670752,
21671458-21672819
Length = 602
Score = 28.3 bits (60), Expect = 7.7
Identities = 15/52 (28%), Positives = 25/52 (48%)
Frame = +2
Query: 95 SLSLMIDSLLATYDRESPPDSKIVVNLTLHLRHANIRESESTVRILADLQMN 250
+L +D L+ YD+ PPDS+ V HA + +R+L + +N
Sbjct: 160 NLWTQVDILILRYDK--PPDSRFVQEALAAHAHATEGSETTAIRLLEVISLN 209
>03_02_0765 + 11000724-11002496
Length = 590
Score = 28.3 bits (60), Expect = 7.7
Identities = 14/30 (46%), Positives = 14/30 (46%)
Frame = -3
Query: 794 AGGGGRXXTXAGGXGXAXGGXXXXLGXXRG 705
AGGGG AGG G GG LG G
Sbjct: 198 AGGGGGLGGGAGGGGGLGGGAGGGLGGGAG 227
Score = 28.3 bits (60), Expect = 7.7
Identities = 14/30 (46%), Positives = 14/30 (46%)
Frame = -3
Query: 794 AGGGGRXXTXAGGXGXAXGGXXXXLGXXRG 705
AGGGG AGG G GG LG G
Sbjct: 328 AGGGGGLGGGAGGGGGLGGGAGGGLGGGAG 357
Score = 28.3 bits (60), Expect = 7.7
Identities = 14/30 (46%), Positives = 14/30 (46%)
Frame = -3
Query: 794 AGGGGRXXTXAGGXGXAXGGXXXXLGXXRG 705
AGGGG AGG G GG LG G
Sbjct: 368 AGGGGGLGGGAGGGGGLGGGAGGGLGGGAG 397
>01_07_0188 -
41866689-41866763,41866889-41867155,41867277-41867722,
41867945-41868033,41868279-41868368,41868661-41868739,
41868979-41869042,41869597-41869684,41869776-41869836,
41869906-41869969,41870134-41870188,41870275-41870346,
41870469-41870551,41870629-41870724,41871279-41871383,
41872159-41872227,41872470-41872561,41872667-41872886
Length = 704
Score = 28.3 bits (60), Expect = 7.7
Identities = 15/56 (26%), Positives = 25/56 (44%)
Frame = -1
Query: 337 VRPPXAFRGHQPSAAAPFPCVPTQSFVDPIHLKICQYPHGGLGLTNVSMSQMQGQV 170
++PP H + AP P +P+ S P++ + PH S +QM Q+
Sbjct: 551 LQPPAHMLPHAQGSRAPLPQLPSMSGPPPVNPPLPPMPHPMAMQVQGSSNQMMPQM 606
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,299,177
Number of Sequences: 37544
Number of extensions: 400921
Number of successful extensions: 2655
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1636
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2389
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2221181676
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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