Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP11_FL5_B17
         (776 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB037732-1|BAA92549.1|  889|Homo sapiens KIAA1311 protein protein.     33   1.1  
BC038449-1|AAH38449.1| 1139|Homo sapiens MGA protein protein.          31   4.6  

>AB037732-1|BAA92549.1|  889|Homo sapiens KIAA1311 protein protein.
          Length = 889

 Score = 33.1 bits (72), Expect = 1.1
 Identities = 19/55 (34%), Positives = 22/55 (40%)
 Frame = -1

Query: 392 FPPPXXLVXXTPXRIXGFLAPKIPKRGXGKFNAPGDFKNPGPXPXGXFQKXXDQG 228
           FPPP   +   P    G L P +P  G G    PG    PGP P    +    QG
Sbjct: 145 FPPPPPGLPPPPP--PGMLMPPMPGPGPGPGPGPGPGPGPGPGPGHSMRLPVPQG 197


>BC038449-1|AAH38449.1| 1139|Homo sapiens MGA protein protein.
          Length = 1139

 Score = 31.1 bits (67), Expect = 4.6
 Identities = 16/37 (43%), Positives = 18/37 (48%), Gaps = 2/37 (5%)
 Frame = +3

Query: 93  IKIVLSNMGMWNEFXEICA--ILLQPGRRXPPACX*W 197
           I + L N  MWNEF       IL + GRR  P C  W
Sbjct: 75  ITVTLDNNSMWNEFYHRSTEMILTKQGRRMFPYCRYW 111


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,837,965
Number of Sequences: 237096
Number of extensions: 1890683
Number of successful extensions: 4078
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2569
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3939
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9423020542
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)