Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP11_FL5_B08
(813 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 36 0.007
SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex p... 34 0.021
SPAC4F8.01 |did4|SPAC644.03c, vps2|vacuolar sorting protein Did4... 31 0.26
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 31 0.26
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 29 0.79
SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyc... 29 0.79
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 28 1.8
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 28 1.8
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 28 1.8
SPAC29B12.07 |sec16||multidomain vesicle coat component Sec16|Sc... 27 2.4
SPAC1F7.09c |||allantoicase |Schizosaccharomyces pombe|chr 1|||M... 27 4.2
SPAC56E4.02c |alg13||N-acetylglucosaminyldiphosphodolichol N-ace... 27 4.2
SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ... 25 9.7
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 35.9 bits (79), Expect = 0.007
Identities = 26/90 (28%), Positives = 28/90 (31%), Gaps = 4/90 (4%)
Frame = +3
Query: 549 PXNIPXVPLRTVXXEXXRPXAGAXPXPXPRWEPPRXPXPXXVRPREXP----PXXPGXXG 716
P P VP +V +GA P P P P P P P P P P
Sbjct: 1117 PSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSS 1176
Query: 717 GXPPXVPPGGXPXLXXXPRXPRPXRXXPTP 806
G PP P P P P P P
Sbjct: 1177 GIPPVPKPAA-----GVPPVPPPSEAPPVP 1201
Score = 35.5 bits (78), Expect = 0.009
Identities = 26/90 (28%), Positives = 29/90 (32%), Gaps = 4/90 (4%)
Frame = +3
Query: 549 PXNIPXVPLRTVXXEXXRPXAGAXPXPXPRWEPPRXPXPXXVRPREXPPXXPGXXGGXPP 728
P P VP +V +GA P P P P P P P P G PP
Sbjct: 1136 PSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVP-----APSSGIPPVPKPAAGVPP 1190
Query: 729 XVPPGGXPXL----XXXPRXPRPXRXXPTP 806
PP P + P P P P P
Sbjct: 1191 VPPPSEAPPVPKPSVGVPPVPPPSTAPPVP 1220
Score = 32.3 bits (70), Expect = 0.084
Identities = 25/85 (29%), Positives = 28/85 (32%), Gaps = 3/85 (3%)
Frame = +3
Query: 561 PXVPLRTVXXEXXRPXAGAXPXPXPRWEPPRXPXPXXVRPREXP---PXXPGXXGGXPPX 731
P PL V + + A P P P + P P P P P P P G P
Sbjct: 1004 PAAPLARVPP-VPKLSSKAPPVPLPSADAPPIPVPSTAPPVPIPTSTPPVPKSSSGAPSA 1062
Query: 732 VPPGGXPXLXXXPRXPRPXRXXPTP 806
PP P P P P P P
Sbjct: 1063 PPPVPAPS-SEIPSIPAPSGAPPVP 1086
Score = 32.3 bits (70), Expect = 0.084
Identities = 23/86 (26%), Positives = 26/86 (30%)
Frame = +3
Query: 549 PXNIPXVPLRTVXXEXXRPXAGAXPXPXPRWEPPRXPXPXXVRPREXPPXXPGXXGGXPP 728
P P VP + +P A P P P P P P P P P
Sbjct: 1079 PSGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGA-PPVPKPSVAAPPVPVPS 1137
Query: 729 XVPPGGXPXLXXXPRXPRPXRXXPTP 806
PP P + P P P P P
Sbjct: 1138 GAPPVPKPSVAAPP-VPAPSGAPPVP 1162
Score = 31.9 bits (69), Expect = 0.11
Identities = 25/79 (31%), Positives = 28/79 (35%), Gaps = 9/79 (11%)
Frame = +3
Query: 600 RPXAGAXPXPXPRWEPPRXPXP----XXVRPREXPPXXPGXXGGXPP-XVPPGGXPXL-- 758
+P AG P P P E P P P V P P P G PP VP P +
Sbjct: 1183 KPAAGVPPVPPPS-EAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVPTAKAPPVPA 1241
Query: 759 --XXXPRXPRPXRXXPTPH 809
P P P+PH
Sbjct: 1242 PSSEAPSVSTPRSSVPSPH 1260
Score = 29.9 bits (64), Expect = 0.45
Identities = 25/90 (27%), Positives = 29/90 (32%), Gaps = 4/90 (4%)
Frame = +3
Query: 549 PXNIPXVPLRTVXXEXXRPXAGAX----PXPXPRWEPPRXPXPXXVRPREXPPXXPGXXG 716
P P VP+ T + +GA P P P E P P P P P P
Sbjct: 1037 PSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIP-PVP 1095
Query: 717 GXPPXVPPGGXPXLXXXPRXPRPXRXXPTP 806
PP P + P P P P P
Sbjct: 1096 KPSVAAPPVPKPSVAVPP-VPAPSGAPPVP 1124
Score = 28.3 bits (60), Expect = 1.4
Identities = 14/46 (30%), Positives = 17/46 (36%)
Frame = +3
Query: 558 IPXVPLRTVXXEXXRPXAGAXPXPXPRWEPPRXPXPXXVRPREXPP 695
+P VP + P AG P P P + P P P P P
Sbjct: 1207 VPPVPPPSTAPPVPTPSAGLPPVPVPTAKAPPVPAPSSEAPSVSTP 1252
Score = 25.8 bits (54), Expect = 7.3
Identities = 15/49 (30%), Positives = 17/49 (34%)
Frame = +3
Query: 549 PXNIPXVPLRTVXXEXXRPXAGAXPXPXPRWEPPRXPXPXXVRPREXPP 695
P P VP +V P + A P P P P P P P P
Sbjct: 1194 PSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVPTAKAPPVPAP 1242
>SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex
protein Gar1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 194
Score = 34.3 bits (75), Expect = 0.021
Identities = 25/55 (45%), Positives = 26/55 (47%)
Frame = -3
Query: 784 GRGXRGXXXRXGXPPGGTXGGXPPXXPGXXGGXSRGRTXXGXGXRGGSHLGXGXG 620
GRG RG R G GG+ GG G GG SRG G G RGGS G G
Sbjct: 136 GRGGRGGF-RGGR--GGSRGGFGGNSRGGFGGGSRG--GFGGGSRGGSRGGFRGG 185
>SPAC4F8.01 |did4|SPAC644.03c, vps2|vacuolar sorting protein
Did4|Schizosaccharomyces pombe|chr 1|||Manual
Length = 210
Score = 30.7 bits (66), Expect = 0.26
Identities = 14/35 (40%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Frame = +3
Query: 207 VRVHRADTGRSSNELDRQTTELERRGMGL-QHLAG 308
+R H+ GR+ ELDR+ T+L++R L Q + G
Sbjct: 18 LRAHQRSLGRAERELDRERTKLDQRERALIQEIKG 52
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 30.7 bits (66), Expect = 0.26
Identities = 19/47 (40%), Positives = 19/47 (40%), Gaps = 1/47 (2%)
Frame = +3
Query: 603 PXAGAXPXPXPRWEPPRXPXPXXVRPREXPPXXPGXXG-GXPPXVPP 740
P A P P P P P P P PP PG G G PP PP
Sbjct: 736 PPAVIVPTPAPAPIPVPPPAPIMGGP-PPPPPPPGVAGAGPPPPPPP 781
Score = 27.9 bits (59), Expect = 1.8
Identities = 20/55 (36%), Positives = 20/55 (36%)
Frame = +3
Query: 621 PXPXPRWEPPRXPXPXXVRPREXPPXXPGXXGGXPPXVPPGGXPXLXXXPRXPRP 785
P P P P P P P PP P GG PP PP G P P P
Sbjct: 733 PPPPPAVIVPT-PAPA---PIPVPPPAP-IMGGPPPPPPPPGVAGAGPPPPPPPP 782
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 29.1 bits (62), Expect = 0.79
Identities = 22/67 (32%), Positives = 24/67 (35%), Gaps = 4/67 (5%)
Frame = +3
Query: 615 AXPXPXPRWEPP--RXPXPXXV-RPREXPPXXP-GXXGGXPPXVPPGGXPXLXXXPRXPR 782
A P P PR P R P P R PP P G P +PP G P P
Sbjct: 360 APPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASRTSTPPVPT 419
Query: 783 PXRXXPT 803
P P+
Sbjct: 420 PPSLPPS 426
>SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 587
Score = 29.1 bits (62), Expect = 0.79
Identities = 19/60 (31%), Positives = 21/60 (35%)
Frame = +3
Query: 621 PXPXPRWEPPRXPXPXXVRPREXPPXXPGXXGGXPPXVPPGGXPXLXXXPRXPRPXRXXP 800
P P + PP P P P P P PP VPPG + P P P P
Sbjct: 492 PLPPTTFAPPGVPLP----PIPGAPGMPNLNMSQPPMVPPG----MALPPGMPAPFPGYP 543
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 27.9 bits (59), Expect = 1.8
Identities = 17/61 (27%), Positives = 19/61 (31%)
Frame = +3
Query: 570 PLRTVXXEXXRPXAGAXPXPXPRWEPPRXPXPXXVRPREXPPXXPGXXGGXPPXVPPGGX 749
P V RP + A P PP P P PP G PP +P
Sbjct: 1683 PAHPVSTPPVRPQSAAPPQMSAPTPPP--PPMSVPPPPSAPPMPAGPPSAPPPPLPASSA 1740
Query: 750 P 752
P
Sbjct: 1741 P 1741
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 27.9 bits (59), Expect = 1.8
Identities = 17/40 (42%), Positives = 17/40 (42%)
Frame = -3
Query: 739 GGTXGGXPPXXPGXXGGXSRGRTXXGXGXRGGSHLGXGXG 620
GG GG PP PG GG G G G H G G G
Sbjct: 194 GGGSGG-PPPGPGGFGGFG---GFGGEGHHHGGHGGFGGG 229
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 27.9 bits (59), Expect = 1.8
Identities = 19/77 (24%), Positives = 24/77 (31%), Gaps = 2/77 (2%)
Frame = +3
Query: 561 PXVPLRTVXXEXXRPXAGAXPXPXPRWEPPRXPXPXXVRPREXPPXXPGXXGGXPPXVP- 737
P P + P + P P P PP + PP P PP P
Sbjct: 130 PPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPS 189
Query: 738 -PGGXPXLXXXPRXPRP 785
P P + P+ P P
Sbjct: 190 LPSAVPPM--PPKVPPP 204
Score = 26.2 bits (55), Expect = 5.5
Identities = 17/60 (28%), Positives = 19/60 (31%), Gaps = 4/60 (6%)
Frame = +3
Query: 603 PXAGAXPXPXPRWEPP----RXPXPXXVRPREXPPXXPGXXGGXPPXVPPGGXPXLXXXP 770
P + A P P PP P P + PP P PP P P L P
Sbjct: 151 PPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPPPPLSQAP 210
Score = 25.8 bits (54), Expect = 7.3
Identities = 16/53 (30%), Positives = 17/53 (32%), Gaps = 3/53 (5%)
Frame = +3
Query: 603 PXAGAXPXPXPRWEPPRXPXPXXVRPREXP---PXXPGXXGGXPPXVPPGGXP 752
P A A P P PP P P P P P P +PP P
Sbjct: 125 PSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQP 177
>SPAC29B12.07 |sec16||multidomain vesicle coat component
Sec16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1995
Score = 27.5 bits (58), Expect = 2.4
Identities = 15/47 (31%), Positives = 17/47 (36%)
Frame = +3
Query: 645 PPRXPXPXXVRPREXPPXXPGXXGGXPPXVPPGGXPXLXXXPRXPRP 785
PP P P P+ PP PP PP G + P P P
Sbjct: 1882 PP--PPPPMALPKAGPPSA-APTSALPPAGPPAGATAISGNPGMPAP 1925
>SPAC1F7.09c |||allantoicase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 342
Score = 26.6 bits (56), Expect = 4.2
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = -1
Query: 285 FPCVPTQSFVDPIHLKICQYPHGGL 211
F +P Q+F H+++C YP GG+
Sbjct: 150 FKEIPQQNFT---HVRLCMYPDGGI 171
>SPAC56E4.02c |alg13||N-acetylglucosaminyldiphosphodolichol
N-acetylglucosaminyltransferase Alg13
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 162
Score = 26.6 bits (56), Expect = 4.2
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = -2
Query: 131 YVARSESIMRDSDVAFSHSAALAIAQVRRNGNQ 33
Y ES + D+ + SH+ A +I Q R+G +
Sbjct: 63 YAPEIESYIHDASIVISHAGAGSILQTLRSGKR 95
>SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 644
Score = 25.4 bits (53), Expect = 9.7
Identities = 12/26 (46%), Positives = 12/26 (46%), Gaps = 1/26 (3%)
Frame = -3
Query: 751 GXPPGGTXGGXPPXXP-GXXGGXSRG 677
G PGG GG P P G GG G
Sbjct: 612 GGAPGGAPGGMPGGAPGGAPGGADNG 637
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,754,190
Number of Sequences: 5004
Number of extensions: 51121
Number of successful extensions: 210
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 143
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 188
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 396433620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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