Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP11_FL5_B04
(1073 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 35 0.087
AL132860-21|CAB60518.2| 759|Caenorhabditis elegans Hypothetical... 34 0.15
AF057032-1|AAC13567.1| 759|Caenorhabditis elegans DNA topoisome... 34 0.15
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 33 0.26
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 33 0.26
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 33 0.26
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 33 0.26
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 33 0.26
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 33 0.26
Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical pr... 33 0.46
Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical pr... 33 0.46
L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein. 33 0.46
AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein. 33 0.46
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 32 0.81
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 32 0.81
AF067219-3|AAC17027.1| 74|Caenorhabditis elegans Hypothetical ... 31 1.1
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 31 1.9
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 31 1.9
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 30 2.5
AC025721-11|AAK29900.1| 78|Caenorhabditis elegans Hypothetical... 30 2.5
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 30 3.3
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 29 4.3
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 29 4.3
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 29 4.3
AC024809-7|AAF59540.1| 315|Caenorhabditis elegans Hypothetical ... 29 4.3
AF016446-1|AAC24166.1| 66|Caenorhabditis elegans Hypothetical ... 29 5.7
Z35719-1|CAA84800.1| 296|Caenorhabditis elegans Hypothetical pr... 29 7.5
AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical... 29 7.5
AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like pro... 29 7.5
AF016446-2|AAC24165.1| 70|Caenorhabditis elegans Hypothetical ... 29 7.5
U55366-2|AAA97981.1| 156|Caenorhabditis elegans Hypothetical pr... 28 10.0
AC006696-4|AAF39985.1| 215|Caenorhabditis elegans Hypothetical ... 28 10.0
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 35.1 bits (77), Expect = 0.087
Identities = 15/29 (51%), Positives = 15/29 (51%)
Frame = +2
Query: 440 GGGXXPPPPPXFXXGGPPPXXGGGGXXXP 526
G G PPPPP F G PPP GG P
Sbjct: 79 GPGGIPPPPPMFAGGIPPPPPMMGGIPPP 107
Score = 33.9 bits (74), Expect = 0.20
Identities = 17/45 (37%), Positives = 17/45 (37%)
Frame = -3
Query: 513 PPPPXXGGGPPXXKXGGGGGXXPPPPXRXXKKKKFFFXXPXKHPP 379
PPPP GG PP GG PPP F P PP
Sbjct: 75 PPPPGPGGIPPPPPMFAGGIPPPPPMMGGIPPPPPMFGAPPPPPP 119
Score = 31.1 bits (67), Expect = 1.4
Identities = 14/31 (45%), Positives = 14/31 (45%)
Frame = -3
Query: 531 F*GXXXPPPPXXGGGPPXXKXGGGGGXXPPP 439
F G PPPP GG PP G PPP
Sbjct: 90 FAGGIPPPPPMMGGIPPPPPMFGAPPPPPPP 120
Score = 30.3 bits (65), Expect = 2.5
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = +2
Query: 446 GXXPPPPPXFXXGGPPPXXGGGG 514
G PPPPP F PPP G G
Sbjct: 102 GGIPPPPPMFGAPPPPPPPSGLG 124
Score = 29.5 bits (63), Expect = 4.3
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = -3
Query: 513 PPPPXXGGGPPXXKXGGGGGXXPPPP 436
PPPP G PP G G P PP
Sbjct: 105 PPPPPMFGAPPPPPPPSGLGVAPQPP 130
Score = 29.1 bits (62), Expect = 5.7
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = -3
Query: 525 GXXXPPPPXXGGGPPXXKXGGGGGXXPPP 439
G PPPP GG P GG PPP
Sbjct: 81 GGIPPPPPMFAGGIPPPPPMMGGIPPPPP 109
>AL132860-21|CAB60518.2| 759|Caenorhabditis elegans Hypothetical
protein Y56A3A.27 protein.
Length = 759
Score = 34.3 bits (75), Expect = 0.15
Identities = 14/26 (53%), Positives = 14/26 (53%)
Frame = -3
Query: 513 PPPPXXGGGPPXXKXGGGGGXXPPPP 436
P P GGGPP GGGGG PP
Sbjct: 618 PGGPGGGGGPPRGPGGGGGGGPTGPP 643
>AF057032-1|AAC13567.1| 759|Caenorhabditis elegans DNA
topoisomerase III protein.
Length = 759
Score = 34.3 bits (75), Expect = 0.15
Identities = 14/26 (53%), Positives = 14/26 (53%)
Frame = -3
Query: 513 PPPPXXGGGPPXXKXGGGGGXXPPPP 436
P P GGGPP GGGGG PP
Sbjct: 618 PGGPGGGGGPPRGPGGGGGGGPTGPP 643
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 33.5 bits (73), Expect = 0.26
Identities = 16/33 (48%), Positives = 16/33 (48%), Gaps = 3/33 (9%)
Frame = -3
Query: 525 GXXXPPPPXXGG---GPPXXKXGGGGGXXPPPP 436
G PPPP GG PP GG G PPPP
Sbjct: 756 GGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPP 788
Score = 31.1 bits (67), Expect = 1.4
Identities = 17/36 (47%), Positives = 17/36 (47%), Gaps = 6/36 (16%)
Frame = -3
Query: 525 GXXXPP--PPXXGGGPPXXKXGG----GGGXXPPPP 436
G PP PP GG PP GG GG PPPP
Sbjct: 712 GPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPP 747
Score = 30.3 bits (65), Expect = 2.5
Identities = 14/28 (50%), Positives = 14/28 (50%), Gaps = 4/28 (14%)
Frame = -3
Query: 507 PPXXGGGPPXXKXGG----GGGXXPPPP 436
PP GG PP GG GG PPPP
Sbjct: 736 PPITGGPPPPPPPGGLPPISGGPPPPPP 763
Score = 29.5 bits (63), Expect = 4.3
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = -3
Query: 507 PPXXGGGPPXXKXGGGGGXXPPPP 436
PP GG PP GG PPPP
Sbjct: 752 PPISGGPPPPPPPPGGCPPPPPPP 775
Score = 29.5 bits (63), Expect = 4.3
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = +2
Query: 440 GGGXXPPPPPXFXXGGPPPXXGGGGXXXP 526
GG PPPPP PPP GG P
Sbjct: 756 GGPPPPPPPPGGCPPPPPPPPPGGFKGGP 784
Score = 29.1 bits (62), Expect = 5.7
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = +2
Query: 455 PPPPPXFXXGGPPP 496
PPPPP GGPPP
Sbjct: 773 PPPPPGGFKGGPPP 786
Score = 28.7 bits (61), Expect = 7.5
Identities = 13/22 (59%), Positives = 13/22 (59%)
Frame = +2
Query: 443 GGXXPPPPPXFXXGGPPPXXGG 508
GG PPPPP GG PP GG
Sbjct: 724 GGPPPPPPP----GGLPPITGG 741
Score = 28.7 bits (61), Expect = 7.5
Identities = 13/22 (59%), Positives = 13/22 (59%)
Frame = +2
Query: 443 GGXXPPPPPXFXXGGPPPXXGG 508
GG PPPPP GG PP GG
Sbjct: 740 GGPPPPPPP----GGLPPISGG 757
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 33.5 bits (73), Expect = 0.26
Identities = 16/33 (48%), Positives = 16/33 (48%), Gaps = 3/33 (9%)
Frame = -3
Query: 525 GXXXPPPPXXGG---GPPXXKXGGGGGXXPPPP 436
G PPPP GG PP GG G PPPP
Sbjct: 756 GGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPP 788
Score = 31.1 bits (67), Expect = 1.4
Identities = 17/36 (47%), Positives = 17/36 (47%), Gaps = 6/36 (16%)
Frame = -3
Query: 525 GXXXPP--PPXXGGGPPXXKXGG----GGGXXPPPP 436
G PP PP GG PP GG GG PPPP
Sbjct: 712 GPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPP 747
Score = 30.3 bits (65), Expect = 2.5
Identities = 14/28 (50%), Positives = 14/28 (50%), Gaps = 4/28 (14%)
Frame = -3
Query: 507 PPXXGGGPPXXKXGG----GGGXXPPPP 436
PP GG PP GG GG PPPP
Sbjct: 736 PPITGGPPPPPPPGGLPPISGGPPPPPP 763
Score = 29.5 bits (63), Expect = 4.3
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = -3
Query: 507 PPXXGGGPPXXKXGGGGGXXPPPP 436
PP GG PP GG PPPP
Sbjct: 752 PPISGGPPPPPPPPGGCPPPPPPP 775
Score = 29.5 bits (63), Expect = 4.3
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = +2
Query: 440 GGGXXPPPPPXFXXGGPPPXXGGGGXXXP 526
GG PPPPP PPP GG P
Sbjct: 756 GGPPPPPPPPGGCPPPPPPPPPGGFKGGP 784
Score = 29.1 bits (62), Expect = 5.7
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = +2
Query: 455 PPPPPXFXXGGPPP 496
PPPPP GGPPP
Sbjct: 773 PPPPPGGFKGGPPP 786
Score = 28.7 bits (61), Expect = 7.5
Identities = 13/22 (59%), Positives = 13/22 (59%)
Frame = +2
Query: 443 GGXXPPPPPXFXXGGPPPXXGG 508
GG PPPPP GG PP GG
Sbjct: 724 GGPPPPPPP----GGLPPITGG 741
Score = 28.7 bits (61), Expect = 7.5
Identities = 13/22 (59%), Positives = 13/22 (59%)
Frame = +2
Query: 443 GGXXPPPPPXFXXGGPPPXXGG 508
GG PPPPP GG PP GG
Sbjct: 740 GGPPPPPPP----GGLPPISGG 757
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 33.5 bits (73), Expect = 0.26
Identities = 16/33 (48%), Positives = 16/33 (48%), Gaps = 3/33 (9%)
Frame = -3
Query: 525 GXXXPPPPXXGG---GPPXXKXGGGGGXXPPPP 436
G PPPP GG PP GG G PPPP
Sbjct: 339 GGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPP 371
Score = 31.1 bits (67), Expect = 1.4
Identities = 17/36 (47%), Positives = 17/36 (47%), Gaps = 6/36 (16%)
Frame = -3
Query: 525 GXXXPP--PPXXGGGPPXXKXGG----GGGXXPPPP 436
G PP PP GG PP GG GG PPPP
Sbjct: 295 GPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPP 330
Score = 30.3 bits (65), Expect = 2.5
Identities = 14/28 (50%), Positives = 14/28 (50%), Gaps = 4/28 (14%)
Frame = -3
Query: 507 PPXXGGGPPXXKXGG----GGGXXPPPP 436
PP GG PP GG GG PPPP
Sbjct: 319 PPITGGPPPPPPPGGLPPISGGPPPPPP 346
Score = 29.5 bits (63), Expect = 4.3
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = -3
Query: 507 PPXXGGGPPXXKXGGGGGXXPPPP 436
PP GG PP GG PPPP
Sbjct: 335 PPISGGPPPPPPPPGGCPPPPPPP 358
Score = 29.5 bits (63), Expect = 4.3
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = +2
Query: 440 GGGXXPPPPPXFXXGGPPPXXGGGGXXXP 526
GG PPPPP PPP GG P
Sbjct: 339 GGPPPPPPPPGGCPPPPPPPPPGGFKGGP 367
Score = 29.1 bits (62), Expect = 5.7
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = +2
Query: 455 PPPPPXFXXGGPPP 496
PPPPP GGPPP
Sbjct: 356 PPPPPGGFKGGPPP 369
Score = 28.7 bits (61), Expect = 7.5
Identities = 13/22 (59%), Positives = 13/22 (59%)
Frame = +2
Query: 443 GGXXPPPPPXFXXGGPPPXXGG 508
GG PPPPP GG PP GG
Sbjct: 307 GGPPPPPPP----GGLPPITGG 324
Score = 28.7 bits (61), Expect = 7.5
Identities = 13/22 (59%), Positives = 13/22 (59%)
Frame = +2
Query: 443 GGXXPPPPPXFXXGGPPPXXGG 508
GG PPPPP GG PP GG
Sbjct: 323 GGPPPPPPP----GGLPPISGG 340
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 33.5 bits (73), Expect = 0.26
Identities = 14/28 (50%), Positives = 15/28 (53%)
Frame = -3
Query: 513 PPPPXXGGGPPXXKXGGGGGXXPPPPXR 430
PPPP GG PP + G PPPP R
Sbjct: 280 PPPPPAGGSPPPPR---AGSPPPPPPPR 304
Score = 30.3 bits (65), Expect = 2.5
Identities = 14/34 (41%), Positives = 15/34 (44%), Gaps = 4/34 (11%)
Frame = -3
Query: 525 GXXXPPPPXXGGGPPXXKXGG----GGGXXPPPP 436
G PPPP G PP + G G PPPP
Sbjct: 251 GSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPP 284
Score = 29.9 bits (64), Expect = 3.3
Identities = 13/26 (50%), Positives = 13/26 (50%)
Frame = -3
Query: 513 PPPPXXGGGPPXXKXGGGGGXXPPPP 436
PPPP G PP G G PPPP
Sbjct: 238 PPPPPPKGSPPL----AGSGSPPPPP 259
Score = 28.3 bits (60), Expect = 10.0
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = +2
Query: 455 PPPPPXFXXGGPPPXXGGGGXXXP 526
PPPPP G PPP GG P
Sbjct: 272 PPPPPT---GSPPPPPAGGSPPPP 292
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 33.5 bits (73), Expect = 0.26
Identities = 14/28 (50%), Positives = 15/28 (53%)
Frame = -3
Query: 513 PPPPXXGGGPPXXKXGGGGGXXPPPPXR 430
PPPP GG PP + G PPPP R
Sbjct: 301 PPPPPAGGSPPPPR---AGSPPPPPPPR 325
Score = 30.3 bits (65), Expect = 2.5
Identities = 14/34 (41%), Positives = 15/34 (44%), Gaps = 4/34 (11%)
Frame = -3
Query: 525 GXXXPPPPXXGGGPPXXKXGG----GGGXXPPPP 436
G PPPP G PP + G G PPPP
Sbjct: 272 GSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPP 305
Score = 29.9 bits (64), Expect = 3.3
Identities = 13/26 (50%), Positives = 13/26 (50%)
Frame = -3
Query: 513 PPPPXXGGGPPXXKXGGGGGXXPPPP 436
PPPP G PP G G PPPP
Sbjct: 259 PPPPPPKGSPPL----AGSGSPPPPP 280
Score = 28.3 bits (60), Expect = 10.0
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = +2
Query: 455 PPPPPXFXXGGPPPXXGGGGXXXP 526
PPPPP G PPP GG P
Sbjct: 293 PPPPPT---GSPPPPPAGGSPPPP 313
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 33.5 bits (73), Expect = 0.26
Identities = 14/28 (50%), Positives = 15/28 (53%)
Frame = -3
Query: 513 PPPPXXGGGPPXXKXGGGGGXXPPPPXR 430
PPPP GG PP + G PPPP R
Sbjct: 286 PPPPPAGGSPPPPR---AGSPPPPPPPR 310
Score = 30.3 bits (65), Expect = 2.5
Identities = 14/34 (41%), Positives = 15/34 (44%), Gaps = 4/34 (11%)
Frame = -3
Query: 525 GXXXPPPPXXGGGPPXXKXGG----GGGXXPPPP 436
G PPPP G PP + G G PPPP
Sbjct: 257 GSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPP 290
Score = 29.9 bits (64), Expect = 3.3
Identities = 13/26 (50%), Positives = 13/26 (50%)
Frame = -3
Query: 513 PPPPXXGGGPPXXKXGGGGGXXPPPP 436
PPPP G PP G G PPPP
Sbjct: 244 PPPPPPKGSPPL----AGSGSPPPPP 265
Score = 28.3 bits (60), Expect = 10.0
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = +2
Query: 455 PPPPPXFXXGGPPPXXGGGGXXXP 526
PPPPP G PPP GG P
Sbjct: 278 PPPPPT---GSPPPPPAGGSPPPP 298
>Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical
protein C02C6.1b protein.
Length = 838
Score = 32.7 bits (71), Expect = 0.46
Identities = 15/28 (53%), Positives = 15/28 (53%)
Frame = -3
Query: 525 GXXXPPPPXXGGGPPXXKXGGGGGXXPP 442
G PPPP G PP GGGGG PP
Sbjct: 786 GPGAPPPP--GMRPPPGAPGGGGGMYPP 811
>Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical
protein C02C6.1a protein.
Length = 830
Score = 32.7 bits (71), Expect = 0.46
Identities = 15/28 (53%), Positives = 15/28 (53%)
Frame = -3
Query: 525 GXXXPPPPXXGGGPPXXKXGGGGGXXPP 442
G PPPP G PP GGGGG PP
Sbjct: 786 GPGAPPPP--GMRPPPGAPGGGGGMYPP 811
>L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein.
Length = 830
Score = 32.7 bits (71), Expect = 0.46
Identities = 15/28 (53%), Positives = 15/28 (53%)
Frame = -3
Query: 525 GXXXPPPPXXGGGPPXXKXGGGGGXXPP 442
G PPPP G PP GGGGG PP
Sbjct: 786 GPGAPPPP--GMRPPPGAPGGGGGMYPP 811
>AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein.
Length = 838
Score = 32.7 bits (71), Expect = 0.46
Identities = 15/28 (53%), Positives = 15/28 (53%)
Frame = -3
Query: 525 GXXXPPPPXXGGGPPXXKXGGGGGXXPP 442
G PPPP G PP GGGGG PP
Sbjct: 786 GPGAPPPP--GMRPPPGAPGGGGGMYPP 811
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 31.9 bits (69), Expect = 0.81
Identities = 15/32 (46%), Positives = 15/32 (46%), Gaps = 2/32 (6%)
Frame = -3
Query: 525 GXXXPPPPXXGGGPPXX--KXGGGGGXXPPPP 436
G PPPP G P GG GG PPPP
Sbjct: 407 GGYGPPPPGGPGAPGSYGPPQGGPGGFGPPPP 438
Score = 28.7 bits (61), Expect = 7.5
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = -3
Query: 510 PPPXXGGGPPXXKXGGGGGXXPPPP 436
PPP G P GG GG PPPP
Sbjct: 392 PPPSAFGAPQG--PGGPGGYGPPPP 414
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 31.9 bits (69), Expect = 0.81
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = +2
Query: 440 GGGXXPPPPPXFXXGGPPPXXGGGGXXXP 526
G PPPPP G PPP GG P
Sbjct: 574 GAPPPPPPPPPMLGGPPPPPPPPGGLMGP 602
Score = 28.3 bits (60), Expect = 10.0
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = +2
Query: 431 LXGGGGXXPPPPPXFXXGGPPPXXGGG 511
L G PPPPP PPP GG
Sbjct: 572 LSGAPPPPPPPPPMLGGPPPPPPPPGG 598
>AF067219-3|AAC17027.1| 74|Caenorhabditis elegans Hypothetical
protein R12E2.6 protein.
Length = 74
Score = 31.5 bits (68), Expect = 1.1
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = -3
Query: 510 PPPXXGGGPPXXKXGGGGGXXPPPP 436
PPP G PP GGG PPPP
Sbjct: 28 PPPQCCGPPPACGNPCGGGFGPPPP 52
Score = 28.7 bits (61), Expect = 7.5
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = -3
Query: 513 PPPPXXGGGPPXXKXGGGGGXXPPPP 436
PPP G P GGG PPPP
Sbjct: 28 PPPQCCGPPPACGNPCGGGFGPPPPP 53
Score = 28.3 bits (60), Expect = 10.0
Identities = 13/25 (52%), Positives = 13/25 (52%), Gaps = 2/25 (8%)
Frame = +2
Query: 440 GGGXXPPPPPXFXXGG--PPPXXGG 508
GGG PPPPP G PPP G
Sbjct: 44 GGGFGPPPPPFGPVGYALPPPPPNG 68
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 30.7 bits (66), Expect = 1.9
Identities = 15/31 (48%), Positives = 15/31 (48%), Gaps = 1/31 (3%)
Frame = -3
Query: 525 GXXXPPPPXXGGGPPXXKXG-GGGGXXPPPP 436
G PPP GGG G GGGG PPP
Sbjct: 46 GGCAPPPAPCGGGCGGGGGGCGGGGGCAPPP 76
Score = 29.9 bits (64), Expect = 3.3
Identities = 15/31 (48%), Positives = 15/31 (48%), Gaps = 1/31 (3%)
Frame = +2
Query: 437 GGGGXXPPPPP-XFXXGGPPPXXGGGGXXXP 526
GGGG PPP P GG GGGG P
Sbjct: 44 GGGGCAPPPAPCGGGCGGGGGGCGGGGGCAP 74
Score = 28.3 bits (60), Expect = 10.0
Identities = 14/27 (51%), Positives = 14/27 (51%), Gaps = 1/27 (3%)
Frame = +2
Query: 437 GGGGXXPPPPP-XFXXGGPPPXXGGGG 514
GGGG PPP P GG GGGG
Sbjct: 68 GGGGCAPPPAPCGGGCGGGGGGCGGGG 94
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 30.7 bits (66), Expect = 1.9
Identities = 15/31 (48%), Positives = 15/31 (48%), Gaps = 1/31 (3%)
Frame = -3
Query: 525 GXXXPPPPXXGGGPPXXKXG-GGGGXXPPPP 436
G PPP GGG G GGGG PPP
Sbjct: 46 GGCAPPPAPCGGGCGGGGGGCGGGGGCAPPP 76
Score = 29.9 bits (64), Expect = 3.3
Identities = 15/31 (48%), Positives = 15/31 (48%), Gaps = 1/31 (3%)
Frame = +2
Query: 437 GGGGXXPPPPP-XFXXGGPPPXXGGGGXXXP 526
GGGG PPP P GG GGGG P
Sbjct: 44 GGGGCAPPPAPCGGGCGGGGGGCGGGGGCAP 74
Score = 28.3 bits (60), Expect = 10.0
Identities = 14/27 (51%), Positives = 14/27 (51%), Gaps = 1/27 (3%)
Frame = +2
Query: 437 GGGGXXPPPPP-XFXXGGPPPXXGGGG 514
GGGG PPP P GG GGGG
Sbjct: 68 GGGGCAPPPAPCGGGCGGGGGGCGGGG 94
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 30.3 bits (65), Expect = 2.5
Identities = 14/25 (56%), Positives = 14/25 (56%)
Frame = +2
Query: 440 GGGXXPPPPPXFXXGGPPPXXGGGG 514
GGG PPPPP GG GGGG
Sbjct: 49 GGGCAPPPPPPACGGG---CGGGGG 70
Score = 30.3 bits (65), Expect = 2.5
Identities = 14/25 (56%), Positives = 14/25 (56%)
Frame = +2
Query: 440 GGGXXPPPPPXFXXGGPPPXXGGGG 514
GGG PPPPP GG GGGG
Sbjct: 106 GGGCAPPPPPPACGGG---CGGGGG 127
Score = 29.9 bits (64), Expect = 3.3
Identities = 18/47 (38%), Positives = 18/47 (38%), Gaps = 2/47 (4%)
Frame = +2
Query: 380 GGCLXGXXXXXXXXXXXLXGGGGXXPPPPPXF--XXGGPPPXXGGGG 514
GGC G GGG PPPPP GG GGGG
Sbjct: 30 GGCGGGCGGGGGCGGGGGCGGGCAPPPPPPACGGGCGGGGGGCGGGG 76
>AC025721-11|AAK29900.1| 78|Caenorhabditis elegans Hypothetical
protein Y48G8AL.12 protein.
Length = 78
Score = 30.3 bits (65), Expect = 2.5
Identities = 14/30 (46%), Positives = 14/30 (46%)
Frame = -3
Query: 525 GXXXPPPPXXGGGPPXXKXGGGGGXXPPPP 436
G PPPP PP GGG PPPP
Sbjct: 30 GCGAPPPPPACAPPPAPACGGGA---PPPP 56
Score = 29.9 bits (64), Expect = 3.3
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = +2
Query: 437 GGGGXXPPPPPXFXXGGPPPXXGGGGXXXP 526
GG G PPPP P P GGG P
Sbjct: 27 GGCGCGAPPPPPACAPPPAPACGGGAPPPP 56
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 29.9 bits (64), Expect = 3.3
Identities = 14/30 (46%), Positives = 15/30 (50%), Gaps = 4/30 (13%)
Frame = -3
Query: 513 PPPPXXG----GGPPXXKXGGGGGXXPPPP 436
PPPP G PP + G GG PPPP
Sbjct: 771 PPPPRGGMHHMPPPPSFRGGRGGHGGPPPP 800
Score = 28.3 bits (60), Expect = 10.0
Identities = 14/35 (40%), Positives = 16/35 (45%), Gaps = 4/35 (11%)
Frame = -3
Query: 510 PPPXXGG----GPPXXKXGGGGGXXPPPPXRXXKK 418
PPP GG PP GG GG PPP ++
Sbjct: 771 PPPPRGGMHHMPPPPSFRGGRGGHGGPPPPHFDRR 805
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 29.5 bits (63), Expect = 4.3
Identities = 14/26 (53%), Positives = 14/26 (53%)
Frame = -3
Query: 513 PPPPXXGGGPPXXKXGGGGGXXPPPP 436
PPPP GPP G GG PPPP
Sbjct: 318 PPPPPSRFGPP-----GMGGMPPPPP 338
Score = 29.1 bits (62), Expect = 5.7
Identities = 16/45 (35%), Positives = 17/45 (37%), Gaps = 2/45 (4%)
Frame = -3
Query: 507 PPXXGGGPPXXKXGGG--GGXXPPPPXRXXKKKKFFFXXPXKHPP 379
PP GG PP G GG PPPP R + P P
Sbjct: 327 PPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRP 371
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 29.5 bits (63), Expect = 4.3
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = -3
Query: 513 PPPPXXGGGPPXXKXGGGGGXXPPPPXR 430
PPPP PP GG PPPP R
Sbjct: 122 PPPPP----PPRKSRAGGSSPPPPPPPR 145
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 29.5 bits (63), Expect = 4.3
Identities = 14/26 (53%), Positives = 14/26 (53%)
Frame = -3
Query: 513 PPPPXXGGGPPXXKXGGGGGXXPPPP 436
PPPP GPP G GG PPPP
Sbjct: 328 PPPPPSRFGPP-----GMGGMPPPPP 348
Score = 29.1 bits (62), Expect = 5.7
Identities = 16/45 (35%), Positives = 17/45 (37%), Gaps = 2/45 (4%)
Frame = -3
Query: 507 PPXXGGGPPXXKXGGG--GGXXPPPPXRXXKKKKFFFXXPXKHPP 379
PP GG PP G GG PPPP R + P P
Sbjct: 337 PPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRP 381
>AC024809-7|AAF59540.1| 315|Caenorhabditis elegans Hypothetical
protein Y53G8AR.9 protein.
Length = 315
Score = 29.5 bits (63), Expect = 4.3
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = +2
Query: 437 GGGGXXPPPPPXFXXGG 487
GG G PPPPP + GG
Sbjct: 206 GGSGRFPPPPPPYGGGG 222
>AF016446-1|AAC24166.1| 66|Caenorhabditis elegans Hypothetical
protein C02E7.7 protein.
Length = 66
Score = 29.1 bits (62), Expect = 5.7
Identities = 14/26 (53%), Positives = 14/26 (53%)
Frame = -3
Query: 513 PPPPXXGGGPPXXKXGGGGGXXPPPP 436
PPPP G G GGGGG PPP
Sbjct: 33 PPPPACGCG------GGGGGYAAPPP 52
>Z35719-1|CAA84800.1| 296|Caenorhabditis elegans Hypothetical
protein F17C8.2 protein.
Length = 296
Score = 28.7 bits (61), Expect = 7.5
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = -3
Query: 525 GXXXPPPPXXGGGPPXXKXGGGGGXXPPP 439
G PP P GGPP G G P P
Sbjct: 218 GPAGPPGPPGPGGPPGDAGGAGSDGAPGP 246
>AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical
protein Y113G7B.23 protein.
Length = 789
Score = 28.7 bits (61), Expect = 7.5
Identities = 12/22 (54%), Positives = 13/22 (59%), Gaps = 3/22 (13%)
Frame = +2
Query: 440 GGGXXPPPPPX---FXXGGPPP 496
GGG PPPPP + G PPP
Sbjct: 675 GGGQGPPPPPQGQQYYGGPPPP 696
>AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like
protein protein.
Length = 789
Score = 28.7 bits (61), Expect = 7.5
Identities = 12/22 (54%), Positives = 13/22 (59%), Gaps = 3/22 (13%)
Frame = +2
Query: 440 GGGXXPPPPPX---FXXGGPPP 496
GGG PPPPP + G PPP
Sbjct: 675 GGGQGPPPPPQGQQYYGGPPPP 696
>AF016446-2|AAC24165.1| 70|Caenorhabditis elegans Hypothetical
protein C02E7.6 protein.
Length = 70
Score = 28.7 bits (61), Expect = 7.5
Identities = 13/23 (56%), Positives = 13/23 (56%), Gaps = 3/23 (13%)
Frame = +2
Query: 437 GGGGXXPPPPPXFXXGG---PPP 496
GG G PPPPP GG PPP
Sbjct: 25 GGCGCAPPPPPACGCGGGAAPPP 47
>U55366-2|AAA97981.1| 156|Caenorhabditis elegans Hypothetical
protein F41F3.3 protein.
Length = 156
Score = 28.3 bits (60), Expect = 10.0
Identities = 15/31 (48%), Positives = 15/31 (48%), Gaps = 3/31 (9%)
Frame = +2
Query: 431 LXGGGGXXPPPPPXF---XXGGPPPXXGGGG 514
L GGGG PPP P GG P GGG
Sbjct: 60 LGGGGGCCPPPAPACGGGCGGGVAPAPIGGG 90
>AC006696-4|AAF39985.1| 215|Caenorhabditis elegans Hypothetical
protein W08E12.6 protein.
Length = 215
Score = 28.3 bits (60), Expect = 10.0
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +2
Query: 455 PPPPPXFXXGGPPPXXG 505
PPPPP F PPP G
Sbjct: 57 PPPPPCFGPACPPPCFG 73
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,122,784
Number of Sequences: 27780
Number of extensions: 170957
Number of successful extensions: 2301
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 591
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1910
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2877115450
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -