Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP11_FL5_A14
         (759 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              24   1.3  
X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor pro...    22   5.4  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    22   7.2  

>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 12/45 (26%), Positives = 22/45 (48%)
 Frame = +3

Query: 42  RNVISCPXALNVNVKKFKQARVNGGSNYDSLKVAKCLXHLISDAH 176
           R V +    +  N  +  +A  + GS+    ++ +CL H I +AH
Sbjct: 115 RPVCASNGKIYANHCELHRAACHSGSSLTKSRLMRCLHHDIENAH 159


>X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor
           protein.
          Length = 168

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = -1

Query: 288 SQAQPGSSFPADSPKPVP 235
           S+A+PG++ P   P+P P
Sbjct: 94  SEAEPGNNRPVYIPQPRP 111


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 21.8 bits (44), Expect = 7.2
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = +1

Query: 265 RRPWLSLTLVW 297
           RR WL++ LVW
Sbjct: 301 RRVWLTILLVW 311


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 117,367
Number of Sequences: 438
Number of extensions: 1978
Number of successful extensions: 22
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23875740
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)