Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP11_FL5_A10
         (1029 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly pro...    23   3.4  
AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly pro...    23   5.9  
DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related pro...    22   7.8  

>DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly
           protein 9 protein.
          Length = 423

 Score = 23.4 bits (48), Expect = 3.4
 Identities = 10/41 (24%), Positives = 19/41 (46%)
 Frame = -1

Query: 189 RLGGGXXVLIPSPNIRWXXNFEVTDLKRRYKCPPGEGGKIF 67
           ++G G  +L P PN  W  N   + +   Y+    E  +++
Sbjct: 97  KIGNGGPLLEPYPNWSWAKNQNCSGITSVYRIAIDEWDRLW 137


>AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly
           protein 8 protein.
          Length = 416

 Score = 22.6 bits (46), Expect = 5.9
 Identities = 9/31 (29%), Positives = 14/31 (45%)
 Frame = -1

Query: 189 RLGGGXXVLIPSPNIRWXXNFEVTDLKRRYK 97
           + G G  +L P P+  W  N   + +   YK
Sbjct: 94  KTGNGGPLLAPYPDWTWAKNENCSGITSAYK 124


>DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related
           protein STG-1 protein.
          Length = 397

 Score = 22.2 bits (45), Expect = 7.8
 Identities = 7/9 (77%), Positives = 7/9 (77%)
 Frame = -3

Query: 721 PPPPPXXGG 695
           PPPPP  GG
Sbjct: 376 PPPPPIRGG 384


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 237,423
Number of Sequences: 438
Number of extensions: 5913
Number of successful extensions: 9
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 34346676
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)