Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP11_FL5_A08
(827 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Y08418-1|CAA69695.1| 503|Homo sapiens nicotinic acetylcholine r... 33 0.95
X53559-1|CAA37625.1| 474|Homo sapiens neuronal nicotinic acetyl... 33 0.95
U62432-1|AAB40110.1| 504|Homo sapiens nicotinic acetylcholine r... 33 0.95
M86383-1|AAC84176.1| 502|Homo sapiens nicotinic acetylcholine r... 33 0.95
M37981-1|AAA59942.1| 503|Homo sapiens neuronal nicotinic acetyl... 33 0.95
BT006897-1|AAP35543.1| 505|Homo sapiens cholinergic receptor, n... 33 0.95
BT006646-1|AAP35292.1| 489|Homo sapiens cholinergic receptor, n... 33 0.95
BC098443-1|AAH98443.1| 504|Homo sapiens cholinergic receptor, n... 33 0.95
BC006114-1|AAH06114.1| 489|Homo sapiens CHRNA3 protein protein. 33 0.95
BC002996-1|AAH02996.1| 505|Homo sapiens cholinergic receptor, n... 33 0.95
BC001642-1|AAH01642.1| 505|Homo sapiens cholinergic receptor, n... 33 0.95
BC000513-1|AAH00513.1| 505|Homo sapiens cholinergic receptor, n... 33 0.95
AJ007783-1|CAA07682.1| 504|Homo sapiens nicotinic acetylcholine... 33 0.95
AF385584-1|AAK68110.1| 489|Homo sapiens nicotinic cholinergic r... 33 0.95
Y00762-1|CAA68731.1| 457|Homo sapiens protein ( Human mRNA for ... 33 1.3
X02502-1|CAA26344.1| 457|Homo sapiens acetylcholine receptor pr... 33 1.3
S77094-1|AAD14247.1| 457|Homo sapiens nicotinic acetylcholine r... 33 1.3
BC006314-1|AAH06314.1| 269|Homo sapiens CHRNA1 protein protein. 33 1.3
AC018890-1|AAY14687.1| 457|Homo sapiens unknown protein. 33 1.3
Y16281-1|CAA76154.1| 529|Homo sapiens nicotinic acetylcholine r... 32 2.2
Y08421-1|CAA69698.1| 627|Homo sapiens nicotinic acetylcholine r... 32 2.2
X89741-1|CAA61893.1| 627|Homo sapiens neuronal acetylcholine re... 32 2.2
X87629-1|CAA60959.1| 602|Homo sapiens nicotinic acetylcholine r... 32 2.2
U62433-1|AAB40111.1| 627|Homo sapiens nicotinic acetylcholine r... 32 2.2
U62431-1|AAB40109.1| 529|Homo sapiens nicotinic acetylcholine r... 32 2.2
L35901-1|AAA64743.1| 627|Homo sapiens nicotinic acetylcholine r... 32 2.2
DQ093071-1|AAY88737.1| 627|Homo sapiens cholinergic receptor, n... 32 2.2
BC096290-1|AAH96290.1| 627|Homo sapiens cholinergic receptor, n... 32 2.2
Y08417-1|CAA69694.1| 458|Homo sapiens nicotinic acetylcholine r... 31 3.9
X67513-1|CAA47851.1| 423|Homo sapiens nicotinic acetylcholine ... 31 3.9
U62438-1|AAB40116.1| 458|Homo sapiens nicotinic acetylcholine r... 31 3.9
BC069788-1|AAH69788.1| 458|Homo sapiens cholinergic receptor, n... 31 3.9
BC069703-1|AAH69703.1| 458|Homo sapiens cholinergic receptor, n... 31 3.9
BC069681-1|AAH69681.1| 458|Homo sapiens cholinergic receptor, n... 31 3.9
AF140765-1|AAD33063.1| 458|Homo sapiens neuronal acetylcholine ... 31 3.9
Y16282-1|CAA76155.1| 494|Homo sapiens nicotinic acetylcholine r... 30 8.9
X01715-1|CAA25861.1| 520|Homo sapiens acetylcholine receptor ga... 30 8.9
U62435-1|AAB40113.1| 494|Homo sapiens nicotinic acetylcholine r... 30 8.9
BC111802-1|AAI11803.1| 465|Homo sapiens CHRNG protein protein. 30 8.9
BC014456-1|AAH14456.1| 494|Homo sapiens cholinergic receptor, n... 30 8.9
AJ306454-1|CAC34819.1| 497|Homo sapiens neuronal nicotinic acet... 30 8.9
AJ295237-1|CAC16144.1| 450|Homo sapiens neuronal nicotinic acet... 30 8.9
AJ278118-1|CAC20435.1| 450|Homo sapiens neuronal nicotinic acet... 30 8.9
AF327367-1|AAK14333.1| 450|Homo sapiens nicotinic acetylcholine... 30 8.9
AF199235-1|AAG00795.2| 450|Homo sapiens nicotinic acetylcholine... 30 8.9
AC092165-3|AAY24103.1| 520|Homo sapiens unknown protein. 30 8.9
AB079251-1|BAC06855.1| 494|Homo sapiens Nicotinic acetylcholine... 30 8.9
>Y08418-1|CAA69695.1| 503|Homo sapiens nicotinic acetylcholine
receptor alpha3 subunit precursor protein.
Length = 503
Score = 33.5 bits (73), Expect = 0.95
Identities = 15/40 (37%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = +3
Query: 342 VSSERLWRPDVVLL-NAAATTXGDYALRARVSNTGSVSWI 458
V ++++W+PD+VL NA D +A + TG V+WI
Sbjct: 109 VPAQKIWKPDIVLYNNAVGDFQVDDKTKALLKYTGEVTWI 148
>X53559-1|CAA37625.1| 474|Homo sapiens neuronal nicotinic
acetylcholine receptor alpha-3merase protein.
Length = 474
Score = 33.5 bits (73), Expect = 0.95
Identities = 15/40 (37%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = +3
Query: 342 VSSERLWRPDVVLL-NAAATTXGDYALRARVSNTGSVSWI 458
V ++++W+PD+VL NA D +A + TG V+WI
Sbjct: 80 VPAQKIWKPDIVLYNNAVGDFQVDDKTKALLKYTGEVTWI 119
>U62432-1|AAB40110.1| 504|Homo sapiens nicotinic acetylcholine
receptor alpha3 subunit precursor protein.
Length = 504
Score = 33.5 bits (73), Expect = 0.95
Identities = 15/40 (37%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = +3
Query: 342 VSSERLWRPDVVLL-NAAATTXGDYALRARVSNTGSVSWI 458
V ++++W+PD+VL NA D +A + TG V+WI
Sbjct: 110 VPAQKIWKPDIVLYNNAVGDFQVDDKTKALLKYTGEVTWI 149
>M86383-1|AAC84176.1| 502|Homo sapiens nicotinic acetylcholine
receptor alpha 3 subunit precursor protein.
Length = 502
Score = 33.5 bits (73), Expect = 0.95
Identities = 18/52 (34%), Positives = 29/52 (55%), Gaps = 4/52 (7%)
Frame = +3
Query: 315 GEWGCXTWLVSSERLWRPDVVLLNAAATTXGDYAL----RARVSNTGSVSWI 458
G G V ++++W+PD+VL N A GD+ + +A + TG V+WI
Sbjct: 99 GYGGAEFMRVPAQKIWKPDIVLYNNAV---GDFQVTTKTKALLKYTGEVTWI 147
>M37981-1|AAA59942.1| 503|Homo sapiens neuronal nicotinic
acetylcholine receptor protein.
Length = 503
Score = 33.5 bits (73), Expect = 0.95
Identities = 15/40 (37%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = +3
Query: 342 VSSERLWRPDVVLL-NAAATTXGDYALRARVSNTGSVSWI 458
V ++++W+PD+VL NA D +A + TG V+WI
Sbjct: 109 VPAQKIWKPDIVLYNNAVGDFQVDDKTKALLKYTGEVTWI 148
>BT006897-1|AAP35543.1| 505|Homo sapiens cholinergic receptor,
nicotinic, alpha polypeptide 3 protein.
Length = 505
Score = 33.5 bits (73), Expect = 0.95
Identities = 15/40 (37%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = +3
Query: 342 VSSERLWRPDVVLL-NAAATTXGDYALRARVSNTGSVSWI 458
V ++++W+PD+VL NA D +A + TG V+WI
Sbjct: 111 VPAQKIWKPDIVLYNNAVGDFQVDDKTKALLKYTGEVTWI 150
>BT006646-1|AAP35292.1| 489|Homo sapiens cholinergic receptor,
nicotinic, alpha polypeptide 3 protein.
Length = 489
Score = 33.5 bits (73), Expect = 0.95
Identities = 15/40 (37%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = +3
Query: 342 VSSERLWRPDVVLL-NAAATTXGDYALRARVSNTGSVSWI 458
V ++++W+PD+VL NA D +A + TG V+WI
Sbjct: 111 VPAQKIWKPDIVLYNNAVGDFQVDDKTKALLKYTGEVTWI 150
>BC098443-1|AAH98443.1| 504|Homo sapiens cholinergic receptor,
nicotinic, alpha 3 protein.
Length = 504
Score = 33.5 bits (73), Expect = 0.95
Identities = 15/40 (37%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = +3
Query: 342 VSSERLWRPDVVLL-NAAATTXGDYALRARVSNTGSVSWI 458
V ++++W+PD+VL NA D +A + TG V+WI
Sbjct: 110 VPAQKIWKPDIVLYNNAVGDFQVDDKTKALLKYTGEVTWI 149
>BC006114-1|AAH06114.1| 489|Homo sapiens CHRNA3 protein protein.
Length = 489
Score = 33.5 bits (73), Expect = 0.95
Identities = 15/40 (37%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = +3
Query: 342 VSSERLWRPDVVLL-NAAATTXGDYALRARVSNTGSVSWI 458
V ++++W+PD+VL NA D +A + TG V+WI
Sbjct: 111 VPAQKIWKPDIVLYNNAVGDFQVDDKTKALLKYTGEVTWI 150
>BC002996-1|AAH02996.1| 505|Homo sapiens cholinergic receptor,
nicotinic, alpha 3 protein.
Length = 505
Score = 33.5 bits (73), Expect = 0.95
Identities = 15/40 (37%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = +3
Query: 342 VSSERLWRPDVVLL-NAAATTXGDYALRARVSNTGSVSWI 458
V ++++W+PD+VL NA D +A + TG V+WI
Sbjct: 111 VPAQKIWKPDIVLYNNAVGDFQVDDKTKALLKYTGEVTWI 150
>BC001642-1|AAH01642.1| 505|Homo sapiens cholinergic receptor,
nicotinic, alpha 3 protein.
Length = 505
Score = 33.5 bits (73), Expect = 0.95
Identities = 15/40 (37%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = +3
Query: 342 VSSERLWRPDVVLL-NAAATTXGDYALRARVSNTGSVSWI 458
V ++++W+PD+VL NA D +A + TG V+WI
Sbjct: 111 VPAQKIWKPDIVLYNNAVGDFQVDDKTKALLKYTGEVTWI 150
>BC000513-1|AAH00513.1| 505|Homo sapiens cholinergic receptor,
nicotinic, alpha 3 protein.
Length = 505
Score = 33.5 bits (73), Expect = 0.95
Identities = 15/40 (37%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = +3
Query: 342 VSSERLWRPDVVLL-NAAATTXGDYALRARVSNTGSVSWI 458
V ++++W+PD+VL NA D +A + TG V+WI
Sbjct: 111 VPAQKIWKPDIVLYNNAVGDFQVDDKTKALLKYTGEVTWI 150
>AJ007783-1|CAA07682.1| 504|Homo sapiens nicotinic acetylcholine
receptor alpha-3 subunit protein.
Length = 504
Score = 33.5 bits (73), Expect = 0.95
Identities = 15/40 (37%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = +3
Query: 342 VSSERLWRPDVVLL-NAAATTXGDYALRARVSNTGSVSWI 458
V ++++W+PD+VL NA D +A + TG V+WI
Sbjct: 110 VPAQKIWKPDIVLYNNAVGDFQVDDKTKALLKYTGEVTWI 149
>AF385584-1|AAK68110.1| 489|Homo sapiens nicotinic cholinergic
receptor alpha 3 protein.
Length = 489
Score = 33.5 bits (73), Expect = 0.95
Identities = 15/40 (37%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = +3
Query: 342 VSSERLWRPDVVLL-NAAATTXGDYALRARVSNTGSVSWI 458
V ++++W+PD+VL NA D +A + TG V+WI
Sbjct: 105 VPAQKIWKPDIVLYNNAVGDFQVDDKTKALLKYTGEVTWI 144
>Y00762-1|CAA68731.1| 457|Homo sapiens protein ( Human mRNA for
muscle acetylcholine receptor alpha-subunit. ).
Length = 457
Score = 33.1 bits (72), Expect = 1.3
Identities = 16/42 (38%), Positives = 26/42 (61%), Gaps = 4/42 (9%)
Frame = +3
Query: 342 VSSERLWRPDVVLLNAAATTXGDYAL----RARVSNTGSVSW 455
+ SE++WRPD+VL N A GD+A+ + + TG ++W
Sbjct: 100 IPSEKIWRPDLVLYNNA---DGDFAIVKFTKVLLQYTGHITW 138
>X02502-1|CAA26344.1| 457|Homo sapiens acetylcholine receptor
protein.
Length = 457
Score = 33.1 bits (72), Expect = 1.3
Identities = 16/42 (38%), Positives = 26/42 (61%), Gaps = 4/42 (9%)
Frame = +3
Query: 342 VSSERLWRPDVVLLNAAATTXGDYAL----RARVSNTGSVSW 455
+ SE++WRPD+VL N A GD+A+ + + TG ++W
Sbjct: 100 IPSEKIWRPDLVLYNNA---DGDFAIVKFTKVLLQYTGHITW 138
>S77094-1|AAD14247.1| 457|Homo sapiens nicotinic acetylcholine
receptor alpha subunit|AChR protein.
Length = 457
Score = 33.1 bits (72), Expect = 1.3
Identities = 16/42 (38%), Positives = 26/42 (61%), Gaps = 4/42 (9%)
Frame = +3
Query: 342 VSSERLWRPDVVLLNAAATTXGDYAL----RARVSNTGSVSW 455
+ SE++WRPD+VL N A GD+A+ + + TG ++W
Sbjct: 100 IPSEKIWRPDLVLYNNA---DGDFAIVKFTKVLLQYTGHITW 138
>BC006314-1|AAH06314.1| 269|Homo sapiens CHRNA1 protein protein.
Length = 269
Score = 33.1 bits (72), Expect = 1.3
Identities = 16/42 (38%), Positives = 26/42 (61%), Gaps = 4/42 (9%)
Frame = +3
Query: 342 VSSERLWRPDVVLLNAAATTXGDYAL----RARVSNTGSVSW 455
+ SE++WRPD+VL N A GD+A+ + + TG ++W
Sbjct: 100 IPSEKIWRPDLVLYNNA---DGDFAIVKFTKVLLQYTGHITW 138
>AC018890-1|AAY14687.1| 457|Homo sapiens unknown protein.
Length = 457
Score = 33.1 bits (72), Expect = 1.3
Identities = 16/42 (38%), Positives = 26/42 (61%), Gaps = 4/42 (9%)
Frame = +3
Query: 342 VSSERLWRPDVVLLNAAATTXGDYAL----RARVSNTGSVSW 455
+ SE++WRPD+VL N A GD+A+ + + TG ++W
Sbjct: 100 IPSEKIWRPDLVLYNNA---DGDFAIVKFTKVLLQYTGHITW 138
>Y16281-1|CAA76154.1| 529|Homo sapiens nicotinic acetylcholine
receptor alpha2 subunit precursor protein.
Length = 529
Score = 32.3 bits (70), Expect = 2.2
Identities = 17/43 (39%), Positives = 27/43 (62%), Gaps = 4/43 (9%)
Frame = +3
Query: 342 VSSERLWRPDVVLLNAAATTXGDYAL----RARVSNTGSVSWI 458
V SE +W PD+VL N A G++A+ +A + +TG+V W+
Sbjct: 135 VPSEMIWIPDIVLYNNA---DGEFAVTHMTKAHLFSTGTVHWV 174
>Y08421-1|CAA69698.1| 627|Homo sapiens nicotinic acetylcholine
receptor alpha4 subunit precursor protein.
Length = 627
Score = 32.3 bits (70), Expect = 2.2
Identities = 17/42 (40%), Positives = 25/42 (59%), Gaps = 4/42 (9%)
Frame = +3
Query: 342 VSSERLWRPDVVLLNAAATTXGDYAL----RARVSNTGSVSW 455
+ SE +WRPD+VL N A GD+A+ +A + + G V W
Sbjct: 113 IPSELIWRPDIVLYNNA---DGDFAVTHLTKAHLFHDGRVQW 151
>X89741-1|CAA61893.1| 627|Homo sapiens neuronal acetylcholine
receptor alpha-4 subunit protein.
Length = 627
Score = 32.3 bits (70), Expect = 2.2
Identities = 17/42 (40%), Positives = 25/42 (59%), Gaps = 4/42 (9%)
Frame = +3
Query: 342 VSSERLWRPDVVLLNAAATTXGDYAL----RARVSNTGSVSW 455
+ SE +WRPD+VL N A GD+A+ +A + + G V W
Sbjct: 113 IPSELIWRPDIVLYNNA---DGDFAVTHLTKAHLFHDGRVQW 151
>X87629-1|CAA60959.1| 602|Homo sapiens nicotinic acetylcholine
receptor protein.
Length = 602
Score = 32.3 bits (70), Expect = 2.2
Identities = 17/42 (40%), Positives = 25/42 (59%), Gaps = 4/42 (9%)
Frame = +3
Query: 342 VSSERLWRPDVVLLNAAATTXGDYAL----RARVSNTGSVSW 455
+ SE +WRPD+VL N A GD+A+ +A + + G V W
Sbjct: 88 IPSELIWRPDIVLYNNA---DGDFAVTHLTKAHLFHDGRVQW 126
>U62433-1|AAB40111.1| 627|Homo sapiens nicotinic acetylcholine
receptor alpha4 subunit precursor protein.
Length = 627
Score = 32.3 bits (70), Expect = 2.2
Identities = 17/42 (40%), Positives = 25/42 (59%), Gaps = 4/42 (9%)
Frame = +3
Query: 342 VSSERLWRPDVVLLNAAATTXGDYAL----RARVSNTGSVSW 455
+ SE +WRPD+VL N A GD+A+ +A + + G V W
Sbjct: 113 IPSELIWRPDIVLYNNA---DGDFAVTHLTKAHLFHDGRVQW 151
>U62431-1|AAB40109.1| 529|Homo sapiens nicotinic acetylcholine
receptor alpha2 subunit precursor protein.
Length = 529
Score = 32.3 bits (70), Expect = 2.2
Identities = 17/43 (39%), Positives = 27/43 (62%), Gaps = 4/43 (9%)
Frame = +3
Query: 342 VSSERLWRPDVVLLNAAATTXGDYAL----RARVSNTGSVSWI 458
V SE +W PD+VL N A G++A+ +A + +TG+V W+
Sbjct: 135 VPSEMIWIPDIVLYNNA---DGEFAVTHMTKAHLFSTGTVHWV 174
>L35901-1|AAA64743.1| 627|Homo sapiens nicotinic acetylcholine
receptor alpha 4 subunit protein.
Length = 627
Score = 32.3 bits (70), Expect = 2.2
Identities = 17/42 (40%), Positives = 25/42 (59%), Gaps = 4/42 (9%)
Frame = +3
Query: 342 VSSERLWRPDVVLLNAAATTXGDYAL----RARVSNTGSVSW 455
+ SE +WRPD+VL N A GD+A+ +A + + G V W
Sbjct: 113 IPSELIWRPDIVLYNNA---DGDFAVTHLTKAHLFHDGRVQW 151
>DQ093071-1|AAY88737.1| 627|Homo sapiens cholinergic receptor,
nicotinic, alpha polypeptide 4 protein.
Length = 627
Score = 32.3 bits (70), Expect = 2.2
Identities = 17/42 (40%), Positives = 25/42 (59%), Gaps = 4/42 (9%)
Frame = +3
Query: 342 VSSERLWRPDVVLLNAAATTXGDYAL----RARVSNTGSVSW 455
+ SE +WRPD+VL N A GD+A+ +A + + G V W
Sbjct: 113 IPSELIWRPDIVLYNNA---DGDFAVTHLTKAHLFHDGRVQW 151
>BC096290-1|AAH96290.1| 627|Homo sapiens cholinergic receptor,
nicotinic, alpha 4 protein.
Length = 627
Score = 32.3 bits (70), Expect = 2.2
Identities = 17/42 (40%), Positives = 25/42 (59%), Gaps = 4/42 (9%)
Frame = +3
Query: 342 VSSERLWRPDVVLLNAAATTXGDYAL----RARVSNTGSVSW 455
+ SE +WRPD+VL N A GD+A+ +A + + G V W
Sbjct: 113 IPSELIWRPDIVLYNNA---DGDFAVTHLTKAHLFHDGRVQW 151
>Y08417-1|CAA69694.1| 458|Homo sapiens nicotinic acetylcholine
receptor beta3 subunit precursor protein.
Length = 458
Score = 31.5 bits (68), Expect = 3.9
Identities = 16/39 (41%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Frame = +3
Query: 342 VSSERLWRPDVVLL-NAAATTXGDYALRARVSNTGSVSW 455
V SE LW PD+VL NA G + V + G+V W
Sbjct: 105 VPSESLWLPDIVLFENADGRFEGSLMTKVIVKSNGTVVW 143
>X67513-1|CAA47851.1| 423|Homo sapiens nicotinic acetylcholine
receptor beta-3 subunit protein.
Length = 423
Score = 31.5 bits (68), Expect = 3.9
Identities = 16/39 (41%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Frame = +3
Query: 342 VSSERLWRPDVVLL-NAAATTXGDYALRARVSNTGSVSW 455
V SE LW PD+VL NA G + V + G+V W
Sbjct: 70 VPSESLWLPDIVLFENADGRFEGSLMTKVIVKSNGTVVW 108
>U62438-1|AAB40116.1| 458|Homo sapiens nicotinic acetylcholine
receptor beta3 subunit precursor protein.
Length = 458
Score = 31.5 bits (68), Expect = 3.9
Identities = 16/39 (41%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Frame = +3
Query: 342 VSSERLWRPDVVLL-NAAATTXGDYALRARVSNTGSVSW 455
V SE LW PD+VL NA G + V + G+V W
Sbjct: 105 VPSESLWLPDIVLFENADGRFEGSLMTKVIVKSNGTVVW 143
>BC069788-1|AAH69788.1| 458|Homo sapiens cholinergic receptor,
nicotinic, beta 3 protein.
Length = 458
Score = 31.5 bits (68), Expect = 3.9
Identities = 16/39 (41%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Frame = +3
Query: 342 VSSERLWRPDVVLL-NAAATTXGDYALRARVSNTGSVSW 455
V SE LW PD+VL NA G + V + G+V W
Sbjct: 105 VPSESLWLPDIVLFENADGRFEGSLMTKVIVKSNGTVVW 143
>BC069703-1|AAH69703.1| 458|Homo sapiens cholinergic receptor,
nicotinic, beta 3 protein.
Length = 458
Score = 31.5 bits (68), Expect = 3.9
Identities = 16/39 (41%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Frame = +3
Query: 342 VSSERLWRPDVVLL-NAAATTXGDYALRARVSNTGSVSW 455
V SE LW PD+VL NA G + V + G+V W
Sbjct: 105 VPSESLWLPDIVLFENADGRFEGSLMTKVIVKSNGTVVW 143
>BC069681-1|AAH69681.1| 458|Homo sapiens cholinergic receptor,
nicotinic, beta 3 protein.
Length = 458
Score = 31.5 bits (68), Expect = 3.9
Identities = 16/39 (41%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Frame = +3
Query: 342 VSSERLWRPDVVLL-NAAATTXGDYALRARVSNTGSVSW 455
V SE LW PD+VL NA G + V + G+V W
Sbjct: 105 VPSESLWLPDIVLFENADGRFEGSLMTKVIVKSNGTVVW 143
>AF140765-1|AAD33063.1| 458|Homo sapiens neuronal acetylcholine
receptor beta-3 subunit precursor protein.
Length = 458
Score = 31.5 bits (68), Expect = 3.9
Identities = 16/39 (41%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Frame = +3
Query: 342 VSSERLWRPDVVLL-NAAATTXGDYALRARVSNTGSVSW 455
V SE LW PD+VL NA G + V + G+V W
Sbjct: 105 VPSESLWLPDIVLFENADGRFEGSLMTKVIVKSNGTVVW 143
>Y16282-1|CAA76155.1| 494|Homo sapiens nicotinic acetylcholine
receptor alpha6 subunit precursor protein.
Length = 494
Score = 30.3 bits (65), Expect = 8.9
Identities = 15/48 (31%), Positives = 27/48 (56%), Gaps = 4/48 (8%)
Frame = +3
Query: 324 GCXTWLVSSERLWRPDVVLLNAAATTXGDYAL----RARVSNTGSVSW 455
G T V ++++W+PD+VL N A GD+ + +A + G ++W
Sbjct: 104 GIETLRVPADKIWKPDIVLYNNAV---GDFQVEGKTKALLKYNGMITW 148
>X01715-1|CAA25861.1| 520|Homo sapiens acetylcholine receptor gamma
chain precursor protein.
Length = 520
Score = 30.3 bits (65), Expect = 8.9
Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 5/62 (8%)
Frame = +2
Query: 140 MIDSLLATYDRDSPPDSKI--VVNLTLHLRHANI---RESESTVRIQADLQMNWIDKRLS 304
++ L+ YD + P + VVN++L L N+ E E + ++M W D RL
Sbjct: 32 LLADLMQNYDPNLRPAERDSDVVNVSLKLTLTNLISLNEREEALTTNVWIEMQWCDYRLR 91
Query: 305 WN 310
W+
Sbjct: 92 WD 93
>U62435-1|AAB40113.1| 494|Homo sapiens nicotinic acetylcholine
receptor alpha6 subunit precursor protein.
Length = 494
Score = 30.3 bits (65), Expect = 8.9
Identities = 15/48 (31%), Positives = 27/48 (56%), Gaps = 4/48 (8%)
Frame = +3
Query: 324 GCXTWLVSSERLWRPDVVLLNAAATTXGDYAL----RARVSNTGSVSW 455
G T V ++++W+PD+VL N A GD+ + +A + G ++W
Sbjct: 104 GIETLRVPADKIWKPDIVLYNNAV---GDFQVEGKTKALLKYNGMITW 148
>BC111802-1|AAI11803.1| 465|Homo sapiens CHRNG protein protein.
Length = 465
Score = 30.3 bits (65), Expect = 8.9
Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 5/62 (8%)
Frame = +2
Query: 140 MIDSLLATYDRDSPPDSKI--VVNLTLHLRHANI---RESESTVRIQADLQMNWIDKRLS 304
++ L+ YD + P + VVN++L L N+ E E + ++M W D RL
Sbjct: 29 LLADLMQNYDPNLRPAERDSDVVNVSLKLTLTNLISLNEREEALTTNVWIEMQWCDYRLR 88
Query: 305 WN 310
W+
Sbjct: 89 WD 90
>BC014456-1|AAH14456.1| 494|Homo sapiens cholinergic receptor,
nicotinic, alpha 6 protein.
Length = 494
Score = 30.3 bits (65), Expect = 8.9
Identities = 15/48 (31%), Positives = 27/48 (56%), Gaps = 4/48 (8%)
Frame = +3
Query: 324 GCXTWLVSSERLWRPDVVLLNAAATTXGDYAL----RARVSNTGSVSW 455
G T V ++++W+PD+VL N A GD+ + +A + G ++W
Sbjct: 104 GIETLRVPADKIWKPDIVLYNNAV---GDFQVEGKTKALLKYNGMITW 148
>AJ306454-1|CAC34819.1| 497|Homo sapiens neuronal nicotinic
acetylcholine receptor beta-4 subunit protein.
Length = 497
Score = 30.3 bits (65), Expect = 8.9
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = +3
Query: 342 VSSERLWRPDVVLLNAAATTXGDYALRARVSNTGSVSWI 458
+ ++R+W PD+VL N T V + GSV W+
Sbjct: 105 IPAKRIWLPDIVLYNNDGTYEVSVYTNLIVRSNGSVLWL 143
>AJ295237-1|CAC16144.1| 450|Homo sapiens neuronal nicotinic
acetylcholine receptor subunit4 protein.
Length = 450
Score = 30.3 bits (65), Expect = 8.9
Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +3
Query: 342 VSSERLWRPDVVLLNAA-ATTXGDYALRARVSNTGSVSW 455
+ S +WRPD+VL N A A G + + + G+V W
Sbjct: 106 IPSSLVWRPDIVLYNKADAQPPGSASTNVVLRHDGAVRW 144
>AJ278118-1|CAC20435.1| 450|Homo sapiens neuronal nicotinic
acetylcholine alpha10 subunit protein.
Length = 450
Score = 30.3 bits (65), Expect = 8.9
Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +3
Query: 342 VSSERLWRPDVVLLNAA-ATTXGDYALRARVSNTGSVSW 455
+ S +WRPD+VL N A A G + + + G+V W
Sbjct: 106 IPSSLVWRPDIVLYNKADAQPPGSASTNVVLRHDGAVRW 144
>AF327367-1|AAK14333.1| 450|Homo sapiens nicotinic acetylcholine
receptor subunit alpha 10 protein.
Length = 450
Score = 30.3 bits (65), Expect = 8.9
Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +3
Query: 342 VSSERLWRPDVVLLNAA-ATTXGDYALRARVSNTGSVSW 455
+ S +WRPD+VL N A A G + + + G+V W
Sbjct: 106 IPSSLVWRPDIVLYNKADAQPPGSASTNVVLRHDGAVRW 144
>AF199235-1|AAG00795.2| 450|Homo sapiens nicotinic acetylcholine
receptor subunit alpha 10 protein.
Length = 450
Score = 30.3 bits (65), Expect = 8.9
Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +3
Query: 342 VSSERLWRPDVVLLNAA-ATTXGDYALRARVSNTGSVSW 455
+ S +WRPD+VL N A A G + + + G+V W
Sbjct: 106 IPSSLVWRPDIVLYNKADAQPPGSASTNVVLRHDGAVRW 144
>AC092165-3|AAY24103.1| 520|Homo sapiens unknown protein.
Length = 520
Score = 30.3 bits (65), Expect = 8.9
Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 5/62 (8%)
Frame = +2
Query: 140 MIDSLLATYDRDSPPDSKI--VVNLTLHLRHANI---RESESTVRIQADLQMNWIDKRLS 304
++ L+ YD + P + VVN++L L N+ E E + ++M W D RL
Sbjct: 32 LLADLMQNYDPNLRPAERDSDVVNVSLKLTLTNLISLNEREEALTTNVWIEMQWCDYRLR 91
Query: 305 WN 310
W+
Sbjct: 92 WD 93
>AB079251-1|BAC06855.1| 494|Homo sapiens Nicotinic acetylcholine
receptor alpha 6 protein.
Length = 494
Score = 30.3 bits (65), Expect = 8.9
Identities = 15/48 (31%), Positives = 27/48 (56%), Gaps = 4/48 (8%)
Frame = +3
Query: 324 GCXTWLVSSERLWRPDVVLLNAAATTXGDYAL----RARVSNTGSVSW 455
G T V ++++W+PD+VL N A GD+ + +A + G ++W
Sbjct: 104 GIETLRVPADKIWKPDIVLYNNAV---GDFQVEGKTKALLKYNGMITW 148
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 104,709,367
Number of Sequences: 237096
Number of extensions: 2144799
Number of successful extensions: 5299
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 4684
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5299
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10370898348
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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