Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP10_T7_P24
(1072 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 27 0.38
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 25 1.5
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 24 2.0
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 23 3.5
DQ015969-1|AAY81926.1| 397|Apis mellifera stargazin related pro... 22 8.1
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 26.6 bits (56), Expect = 0.38
Identities = 12/29 (41%), Positives = 12/29 (41%), Gaps = 2/29 (6%)
Frame = +1
Query: 409 PPXPP--PPPXXPPXPPPPXXPXXXXXPP 489
PP P PPP PP PP P P
Sbjct: 39 PPNPSQGPPPGGPPGAPPSQNPSQMMISP 67
Score = 26.2 bits (55), Expect = 0.50
Identities = 9/17 (52%), Positives = 9/17 (52%)
Frame = +3
Query: 546 PPXPPPXPPPXXPPXPP 596
PP P PPP PP P
Sbjct: 39 PPNPSQGPPPGGPPGAP 55
Score = 23.0 bits (47), Expect = 4.7
Identities = 9/23 (39%), Positives = 9/23 (39%)
Frame = +1
Query: 604 PPPXPPPXPPXXPPXPXPXXPPP 672
P PP P PP P PP
Sbjct: 34 PQRGSPPNPSQGPPPGGPPGAPP 56
Score = 23.0 bits (47), Expect = 4.7
Identities = 8/16 (50%), Positives = 8/16 (50%)
Frame = +1
Query: 811 PPPXPXPPPXXPPXXP 858
P P PPP PP P
Sbjct: 40 PNPSQGPPPGGPPGAP 55
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 24.6 bits (51), Expect = 1.5
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = +2
Query: 506 PPRPXPXXPPPPP 544
PP+P P PPPPP
Sbjct: 338 PPKPAP--PPPPP 348
Score = 24.6 bits (51), Expect = 1.5
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = +1
Query: 991 PXPPPPPPXXRXP 1029
P PPPPPP P
Sbjct: 341 PAPPPPPPSSSGP 353
Score = 23.4 bits (48), Expect = 3.5
Identities = 8/16 (50%), Positives = 8/16 (50%)
Frame = +1
Query: 421 PPPPXXPPXPPPPXXP 468
PP P PP PP P
Sbjct: 338 PPKPAPPPPPPSSSGP 353
Score = 23.4 bits (48), Expect = 3.5
Identities = 8/16 (50%), Positives = 8/16 (50%)
Frame = +3
Query: 546 PPXPPPXPPPXXPPXP 593
PP P P PPP P
Sbjct: 338 PPKPAPPPPPPSSSGP 353
Score = 23.4 bits (48), Expect = 3.5
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = +2
Query: 815 PPAPXXXPPPPPP 853
PP P PPPPPP
Sbjct: 338 PPKPA--PPPPPP 348
Score = 23.0 bits (47), Expect = 4.7
Identities = 8/16 (50%), Positives = 8/16 (50%)
Frame = +1
Query: 409 PPXPPPPPXXPPXPPP 456
PP P PPP P P
Sbjct: 338 PPKPAPPPPPPSSSGP 353
Score = 22.6 bits (46), Expect = 6.2
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = +1
Query: 604 PPPXPPPXPP 633
P P PPP PP
Sbjct: 339 PKPAPPPPPP 348
Score = 22.2 bits (45), Expect = 8.1
Identities = 7/11 (63%), Positives = 7/11 (63%)
Frame = +1
Query: 400 PXXPPXPPPPP 432
P P PPPPP
Sbjct: 338 PPKPAPPPPPP 348
Score = 22.2 bits (45), Expect = 8.1
Identities = 7/11 (63%), Positives = 7/11 (63%)
Frame = +1
Query: 640 PPXPXPXXPPP 672
PP P P PPP
Sbjct: 338 PPKPAPPPPPP 348
Score = 22.2 bits (45), Expect = 8.1
Identities = 7/11 (63%), Positives = 7/11 (63%)
Frame = +3
Query: 921 PPXPXPXPXPP 953
PP P P P PP
Sbjct: 338 PPKPAPPPPPP 348
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 24.2 bits (50), Expect = 2.0
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = +1
Query: 397 RPXXPPXPPPPP 432
R PP PPPPP
Sbjct: 1351 RQQQPPPPPPPP 1362
Score = 23.4 bits (48), Expect = 3.5
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +2
Query: 836 PPPPPPXP 859
PPPPPP P
Sbjct: 1355 PPPPPPPP 1362
Score = 23.4 bits (48), Expect = 3.5
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +1
Query: 991 PXPPPPPP 1014
P PPPPPP
Sbjct: 1355 PPPPPPPP 1362
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 23.4 bits (48), Expect = 3.5
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +1
Query: 991 PXPPPPPP 1014
P PPPPPP
Sbjct: 1857 PEPPPPPP 1864
Score = 22.2 bits (45), Expect = 8.1
Identities = 7/14 (50%), Positives = 9/14 (64%)
Frame = +2
Query: 812 LPPAPXXXPPPPPP 853
+P + PPPPPP
Sbjct: 1851 IPVSGSPEPPPPPP 1864
>DQ015969-1|AAY81926.1| 397|Apis mellifera stargazin related
protein STG-1 protein.
Length = 397
Score = 22.2 bits (45), Expect = 8.1
Identities = 10/24 (41%), Positives = 10/24 (41%)
Frame = -3
Query: 512 GGXVXXXXGGXXXXXGXXGGGGXG 441
GG V GG GGGG G
Sbjct: 28 GGVVTGASGGSIVVGANNGGGGGG 51
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.313 0.154 0.581
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 261,952
Number of Sequences: 438
Number of extensions: 14612
Number of successful extensions: 41
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30
length of database: 146,343
effective HSP length: 59
effective length of database: 120,501
effective search space used: 35788797
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.6 bits)
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