Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP10_T7_P20
(822 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC114377-1|AAI14378.1| 44|Homo sapiens Unknown (protein for MG... 37 0.077
BC006350-1|AAH06350.1| 619|Homo sapiens BUD13 homolog (S. cerev... 31 5.0
X74301-1|CAA52354.1| 1130|Homo sapiens (MHC) class II transactiv... 30 8.8
U18288-1|AAA88862.1| 884|Homo sapiens MHC class II transactivat... 30 8.8
U18259-1|AAA88861.1| 1130|Homo sapiens MHC class II transactivat... 30 8.8
EF064747-1|ABK41930.1| 1130|Homo sapiens class II, major histoco... 30 8.8
BC048251-1|AAH48251.1| 322|Homo sapiens ZDHHC12 protein protein. 30 8.8
AY699071-1|AAU06586.1| 1107|Homo sapiens CIITA IV protein. 30 8.8
AL441992-6|CAI15406.1| 210|Homo sapiens zinc finger, DHHC-type ... 30 8.8
AF410154-1|AAL04118.1| 932|Homo sapiens MHC2TA protein. 30 8.8
>BC114377-1|AAI14378.1| 44|Homo sapiens Unknown (protein for
MGC:134704) protein.
Length = 44
Score = 37.1 bits (82), Expect = 0.077
Identities = 17/18 (94%), Positives = 18/18 (100%)
Frame = +2
Query: 602 MIGRADIEGSKSNVAMNA 655
MIGRADIEGSKS+VAMNA
Sbjct: 1 MIGRADIEGSKSDVAMNA 18
Score = 31.9 bits (69), Expect = 2.9
Identities = 11/12 (91%), Positives = 11/12 (91%)
Frame = +3
Query: 657 WLPQASYPCGNF 692
W PQASYPCGNF
Sbjct: 19 WPPQASYPCGNF 30
>BC006350-1|AAH06350.1| 619|Homo sapiens BUD13 homolog (S.
cerevisiae) protein.
Length = 619
Score = 31.1 bits (67), Expect = 5.0
Identities = 18/45 (40%), Positives = 23/45 (51%)
Frame = +2
Query: 50 AGLSLNRSQHDAALPSTTPRQERKSSTDYSEPRHRTELYPDLRSR 184
+G S R +HD+ PS PR+ R S+D S PR PD R
Sbjct: 211 SGASPRRVRHDSPDPSP-PRRARHGSSDISSPRRVHNNSPDTSRR 254
>X74301-1|CAA52354.1| 1130|Homo sapiens (MHC) class II
transactivator protein.
Length = 1130
Score = 30.3 bits (65), Expect = 8.8
Identities = 14/36 (38%), Positives = 18/36 (50%)
Frame = -1
Query: 717 EFLARGARKSYHRDNWLVAAKAFIATLLFDPSMSAL 610
++LA RK DNWL F+A L+F P L
Sbjct: 735 QYLALTPRKKRPYDNWLEGVPRFLAGLIFQPPARCL 770
>U18288-1|AAA88862.1| 884|Homo sapiens MHC class II transactivator
CIITA protein.
Length = 884
Score = 30.3 bits (65), Expect = 8.8
Identities = 14/36 (38%), Positives = 18/36 (50%)
Frame = -1
Query: 717 EFLARGARKSYHRDNWLVAAKAFIATLLFDPSMSAL 610
++LA RK DNWL F+A L+F P L
Sbjct: 687 QYLALTPRKKRPYDNWLEGVPRFLAGLIFQPPARCL 722
>U18259-1|AAA88861.1| 1130|Homo sapiens MHC class II transactivator
CIITA protein.
Length = 1130
Score = 30.3 bits (65), Expect = 8.8
Identities = 14/36 (38%), Positives = 18/36 (50%)
Frame = -1
Query: 717 EFLARGARKSYHRDNWLVAAKAFIATLLFDPSMSAL 610
++LA RK DNWL F+A L+F P L
Sbjct: 735 QYLALTPRKKRPYDNWLEGVPRFLAGLIFQPPARCL 770
>EF064747-1|ABK41930.1| 1130|Homo sapiens class II, major
histocompatibility complex, transactivator protein.
Length = 1130
Score = 30.3 bits (65), Expect = 8.8
Identities = 14/36 (38%), Positives = 18/36 (50%)
Frame = -1
Query: 717 EFLARGARKSYHRDNWLVAAKAFIATLLFDPSMSAL 610
++LA RK DNWL F+A L+F P L
Sbjct: 735 QYLALTPRKKRPYDNWLEGVPRFLAGLIFQPPARCL 770
>BC048251-1|AAH48251.1| 322|Homo sapiens ZDHHC12 protein protein.
Length = 322
Score = 30.3 bits (65), Expect = 8.8
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = -2
Query: 377 TPLRPKPA*PNPARICSLWSPESRE 303
TP P P P PA +CS SPE R+
Sbjct: 68 TPTPPTPVLPGPASLCSPASPELRQ 92
>AY699071-1|AAU06586.1| 1107|Homo sapiens CIITA IV protein.
Length = 1107
Score = 30.3 bits (65), Expect = 8.8
Identities = 14/36 (38%), Positives = 18/36 (50%)
Frame = -1
Query: 717 EFLARGARKSYHRDNWLVAAKAFIATLLFDPSMSAL 610
++LA RK DNWL F+A L+F P L
Sbjct: 712 QYLALTPRKKRPYDNWLEGVPRFLAGLIFQPPARCL 747
>AL441992-6|CAI15406.1| 210|Homo sapiens zinc finger, DHHC-type
containing 12 protein.
Length = 210
Score = 30.3 bits (65), Expect = 8.8
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = -2
Query: 377 TPLRPKPA*PNPARICSLWSPESRE 303
TP P P P PA +CS SPE R+
Sbjct: 68 TPTPPTPVLPGPASLCSPASPELRQ 92
>AF410154-1|AAL04118.1| 932|Homo sapiens MHC2TA protein.
Length = 932
Score = 30.3 bits (65), Expect = 8.8
Identities = 14/36 (38%), Positives = 18/36 (50%)
Frame = -1
Query: 717 EFLARGARKSYHRDNWLVAAKAFIATLLFDPSMSAL 610
++LA RK DNWL F+A L+F P L
Sbjct: 735 QYLALTPRKKRPYDNWLEGVPRFLAGLIFQPPARCL 770
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 118,850,770
Number of Sequences: 237096
Number of extensions: 2603103
Number of successful extensions: 6117
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5814
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6110
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10259383312
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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