Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP10_T7_P19
         (832 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_06_0581 - 30386018-30386440                                         29   4.5  
03_05_0637 - 26312348-26313004,26313507-26313575,26313799-26314071     28   7.9  

>01_06_0581 - 30386018-30386440
          Length = 140

 Score = 29.1 bits (62), Expect = 4.5
 Identities = 12/25 (48%), Positives = 17/25 (68%)
 Frame = +2

Query: 272 SGVRSQVLERLEMRLRSGGGGARRQ 346
           SG+  +V +R+E   R GGGG RR+
Sbjct: 31  SGIEVKVRKRVEKEARMGGGGRRRR 55


>03_05_0637 - 26312348-26313004,26313507-26313575,26313799-26314071
          Length = 332

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = -3

Query: 662 QGESXGGQXXPXFFSGXGPRHTRWR 588
           +G + GG   P FF+  G    RWR
Sbjct: 223 EGHNGGGSSPPPFFTSVGGEEQRWR 247


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,679,504
Number of Sequences: 37544
Number of extensions: 170211
Number of successful extensions: 640
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 615
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 639
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2291695380
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)