Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP10_T7_P17
         (810 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_06_0581 - 30386018-30386440                                         29   4.4  
12_02_0992 + 25083397-25083537,25084198-25084228,25084971-250851...    28   7.6  

>01_06_0581 - 30386018-30386440
          Length = 140

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 12/25 (48%), Positives = 17/25 (68%)
 Frame = +2

Query: 272 SGVRSQVLERLEMRLRSGGGGARRQ 346
           SG+  +V +R+E   R GGGG RR+
Sbjct: 31  SGIEVKVRKRVEKEARMGGGGRRRR 55


>12_02_0992 +
           25083397-25083537,25084198-25084228,25084971-25085139,
           25085228-25085291,25085408-25085474,25086543-25086586,
           25086835-25086922,25087079-25087238,25087659-25087779,
           25087859-25087942,25088043-25088162,25088689-25088901,
           25088995-25089054,25089144-25089262,25089407-25089465,
           25089585-25089919
          Length = 624

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 11/26 (42%), Positives = 13/26 (50%)
 Frame = -1

Query: 663 PXRGGXSPWQCSRCLSRXRAPAHALA 586
           P R G  PW+C RC    R    +LA
Sbjct: 2   PLRSGHGPWKCRRCRPNKRKGRLSLA 27


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,774,525
Number of Sequences: 37544
Number of extensions: 151222
Number of successful extensions: 547
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 533
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 546
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2209429392
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)