Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP10_T7_P11
         (851 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81053-1|CAB02877.1|  385|Caenorhabditis elegans Hypothetical pr...    29   5.5  
Z12018-1|CAD88219.2|  774|Caenorhabditis elegans Hypothetical pr...    29   5.5  
Z11126-8|CAD88221.2|  774|Caenorhabditis elegans Hypothetical pr...    29   5.5  
AL110484-17|CAB54408.1|  586|Caenorhabditis elegans Hypothetical...    28   7.3  
AF000198-8|AAP68908.1|  435|Caenorhabditis elegans Collagen prot...    28   7.3  
Z67990-1|CAA91932.1|  316|Caenorhabditis elegans Hypothetical pr...    28   9.7  

>Z81053-1|CAB02877.1|  385|Caenorhabditis elegans Hypothetical
           protein E02A10.2 protein.
          Length = 385

 Score = 28.7 bits (61), Expect = 5.5
 Identities = 12/23 (52%), Positives = 12/23 (52%)
 Frame = -2

Query: 646 FFFXXPXGGGGGGXXXXXXGGGG 578
           F F    GGGGGG      GGGG
Sbjct: 18  FLFPSGGGGGGGGGCGGGCGGGG 40


>Z12018-1|CAD88219.2|  774|Caenorhabditis elegans Hypothetical
           protein ZK643.8 protein.
          Length = 774

 Score = 28.7 bits (61), Expect = 5.5
 Identities = 13/33 (39%), Positives = 13/33 (39%)
 Frame = -2

Query: 640 FXXPXGGGGGGXXXXXXGGGGXXXXXXXXXPPP 542
           F  P  GGGGG      G GG         PPP
Sbjct: 20  FLFPSAGGGGGGGGCGGGCGGGCGGGGGCAPPP 52


>Z11126-8|CAD88221.2|  774|Caenorhabditis elegans Hypothetical
           protein ZK643.8 protein.
          Length = 774

 Score = 28.7 bits (61), Expect = 5.5
 Identities = 13/33 (39%), Positives = 13/33 (39%)
 Frame = -2

Query: 640 FXXPXGGGGGGXXXXXXGGGGXXXXXXXXXPPP 542
           F  P  GGGGG      G GG         PPP
Sbjct: 20  FLFPSAGGGGGGGGCGGGCGGGCGGGGGCAPPP 52


>AL110484-17|CAB54408.1|  586|Caenorhabditis elegans Hypothetical
           protein Y38E10A.17 protein.
          Length = 586

 Score = 28.3 bits (60), Expect = 7.3
 Identities = 11/18 (61%), Positives = 11/18 (61%)
 Frame = -2

Query: 631 PXGGGGGGXXXXXXGGGG 578
           P GGGGGG      GGGG
Sbjct: 457 PAGGGGGGSGGYGAGGGG 474


>AF000198-8|AAP68908.1|  435|Caenorhabditis elegans Collagen protein
           51 protein.
          Length = 435

 Score = 28.3 bits (60), Expect = 7.3
 Identities = 11/18 (61%), Positives = 11/18 (61%)
 Frame = -2

Query: 631 PXGGGGGGXXXXXXGGGG 578
           P GGGGGG      GGGG
Sbjct: 318 PAGGGGGGDFPAGGGGGG 335


>Z67990-1|CAA91932.1|  316|Caenorhabditis elegans Hypothetical
           protein F02D10.1 protein.
          Length = 316

 Score = 27.9 bits (59), Expect = 9.7
 Identities = 12/27 (44%), Positives = 12/27 (44%)
 Frame = -2

Query: 625 GGGGGGXXXXXXGGGGXXXXXXXXXPP 545
           GGGGGG      GGGG         PP
Sbjct: 96  GGGGGGGGGEAAGGGGGCTGCCNPGPP 122


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,858,033
Number of Sequences: 27780
Number of extensions: 145980
Number of successful extensions: 759
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 212
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 612
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2118983636
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)