Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP10_T7_O16
         (865 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_02_0119 + 12040476-12041273,12042767-12042834,12042931-12042979     29   4.8  
05_07_0332 - 29332520-29332818,29333511-29333725,29334380-293344...    29   6.3  
03_02_0071 + 5425722-5427154,5427259-5427464,5428445-5428686,542...    29   6.3  

>06_02_0119 + 12040476-12041273,12042767-12042834,12042931-12042979
          Length = 304

 Score = 29.1 bits (62), Expect = 4.8
 Identities = 11/23 (47%), Positives = 12/23 (52%)
 Frame = +3

Query: 543 PPPPXXXXXKKXKXGKXPXPPPP 611
           PPPP      K K  + P PPPP
Sbjct: 68  PPPPTKPKHPKPKQQQHPPPPPP 90


>05_07_0332 - 29332520-29332818,29333511-29333725,29334380-29334408,
            29334956-29335045,29335120-29335155,29335222-29336553,
            29337331-29337497,29337519-29337724,29337815-29338036,
            29338332-29338381,29338754-29338870,29339471-29339551,
            29339656-29339694,29340464-29340636,29340769-29340826,
            29340934-29340987,29341066-29341613,29341695-29341755,
            29342180-29342260,29342448-29342630,29342908-29343162,
            29343304-29343423,29343497-29344901,29344988-29345085,
            29345164-29345218,29345307-29345366,29346498-29346697
          Length = 2077

 Score = 28.7 bits (61), Expect = 6.3
 Identities = 11/23 (47%), Positives = 11/23 (47%)
 Frame = +2

Query: 542  PPPPPXXXXKKKXKXKXPXXPPP 610
            PPPPP    K K     P  PPP
Sbjct: 1934 PPPPPPVEGKPKPPPHAPPPPPP 1956


>03_02_0071 +
           5425722-5427154,5427259-5427464,5428445-5428686,
           5428788-5429570
          Length = 887

 Score = 28.7 bits (61), Expect = 6.3
 Identities = 11/23 (47%), Positives = 11/23 (47%)
 Frame = +2

Query: 542 PPPPPXXXXKKKXKXKXPXXPPP 610
           PPPPP    K     K P  PPP
Sbjct: 357 PPPPPPPPPKLNTAPKPPPPPPP 379


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,351,960
Number of Sequences: 37544
Number of extensions: 236604
Number of successful extensions: 934
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 445
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 691
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2420970504
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)