Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP10_T7_O09
(811 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC013284-1|AAH13284.1| 276|Homo sapiens LOC642031 protein protein. 38 0.057
AK096721-1|BAC04850.1| 180|Homo sapiens protein ( Homo sapiens ... 36 0.13
BC113562-1|AAI13563.1| 416|Homo sapiens hepatocyte cell adhesio... 36 0.23
BC104831-1|AAI04832.1| 416|Homo sapiens hepatocyte cell adhesio... 36 0.23
AY047587-1|AAQ93018.1| 416|Homo sapiens hypothetical protein pr... 36 0.23
AL834419-1|CAD39081.1| 165|Homo sapiens hypothetical protein pr... 36 0.23
AK098396-1|BAC05297.1| 416|Homo sapiens protein ( Homo sapiens ... 36 0.23
AF129756-17|AAD18086.1| 2157|Homo sapiens BAT2 protein. 34 0.70
AC006011-2|AAX82033.1| 1336|Homo sapiens unknown protein. 33 0.92
AB044749-1|BAB32435.1| 1336|Homo sapiens WDC146 protein. 33 0.92
DQ421853-1|ABD77575.1| 500|Homo sapiens synaptojanin 1 protein. 33 1.6
M64592-1|AAA59572.1| 554|Homo sapiens macrophage colony-stimula... 26 1.7
M37435-1|AAA52117.1| 554|Homo sapiens CSF1 protein. 26 1.7
BC021117-1|AAH21117.1| 554|Homo sapiens colony stimulating fact... 26 1.7
AL450468-2|CAH71146.1| 554|Homo sapiens colony stimulating fact... 26 1.7
M27087-1|AAA59573.1| 553|Homo sapiens macrophage colony-stimula... 26 1.7
X05825-1|CAA29265.1| 536|Homo sapiens CSF-4 protein. 26 1.7
AB208952-1|BAD92189.1| 515|Homo sapiens colony stimulating fact... 26 1.7
U22386-1|AAA64849.1| 438|Homo sapiens macrophage-colony stimula... 26 1.7
AL450468-1|CAH71147.1| 438|Homo sapiens colony stimulating fact... 26 1.7
AL162741-4|CAI23246.1| 255|Homo sapiens tumor necrosis factor r... 32 2.1
AF241229-1|AAF63506.1| 255|Homo sapiens GITR-D protein. 32 2.1
BC039260-1|AAH39260.1| 765|Homo sapiens RBM12B protein protein. 32 2.8
AF009040-1|AAC51922.1| 1575|Homo sapiens synaptojanin protein. 32 2.8
AF009039-1|AAC51921.1| 1311|Homo sapiens synaptojanin protein. 32 2.8
M33518-1|AAA35586.1| 2142|Homo sapiens protein ( Human HLA-B-ass... 31 4.9
M33509-1|AAA35585.1| 2142|Homo sapiens protein ( Human HLA-B-ass... 31 4.9
BX511262-1|CAI95572.1| 2157|Homo sapiens HLA-B associated transc... 31 4.9
BC060668-1|AAH60668.1| 2157|Homo sapiens HLA-B associated transc... 31 4.9
BC042295-1|AAH42295.1| 2157|Homo sapiens BAT2 protein protein. 31 4.9
BC030127-1|AAH30127.1| 696|Homo sapiens Similar to HLA-B associ... 31 4.9
BA000025-31|BAB63391.1| 2157|Homo sapiens BAT2 protein. 31 4.9
AL805934-4|CAI18500.1| 2157|Homo sapiens HLA-B associated transc... 31 4.9
AL662847-63|CAI17698.2| 2157|Homo sapiens HLA-B associated trans... 31 4.9
AL662801-47|CAI18313.1| 2157|Homo sapiens HLA-B associated trans... 31 4.9
AB210034-1|BAE06116.1| 1537|Homo sapiens C6orf21 variant protein... 31 4.9
BC030225-1|AAH30225.1| 134|Homo sapiens SNX22 protein protein. 31 6.5
BC028012-1|AAH28012.1| 670|Homo sapiens PML-RARA regulated adap... 31 6.5
AY258142-1|AAP45947.1| 737|Homo sapiens small-conductance calci... 31 6.5
AY049734-1|AAL10706.1| 737|Homo sapiens small-conductance calci... 31 6.5
AL954342-3|CAH72739.1| 731|Homo sapiens potassium intermediate/... 31 6.5
AL606500-5|CAH71911.1| 731|Homo sapiens potassium intermediate/... 31 6.5
AL390204-3|CAH71151.1| 731|Homo sapiens potassium intermediate/... 31 6.5
AJ272324-1|CAC17767.1| 718|Homo sapiens adaptor molecule-1 prot... 31 6.5
AJ251016-1|CAB61331.1| 736|Homo sapiens SK3 protein protein. 31 6.5
AF336797-1|AAK15345.1| 736|Homo sapiens small-conductance calci... 31 6.5
AF182077-1|AAF62874.1| 1509|Homo sapiens glioma tumor suppressor... 31 6.5
AF031815-1|AAC26099.1| 731|Homo sapiens calcium-activated potas... 31 6.5
M55172-1|AAA62824.1| 2316|Homo sapiens large aggregating cartila... 27 7.3
X17406-1|CAA35463.1| 600|Homo sapiens cartilage specific proteo... 27 8.1
BC132861-1|AAI32862.1| 276|Homo sapiens hypothetical protein LO... 30 8.6
BC126240-1|AAI26241.1| 276|Homo sapiens hypothetical protein LO... 30 8.6
BC110827-1|AAI10828.1| 132|Homo sapiens DENND3 protein protein. 30 8.6
BC068551-1|AAH68551.1| 582|Homo sapiens LYN protein protein. 30 8.6
BC059394-1|AAH59394.1| 582|Homo sapiens LYN protein protein. 30 8.6
AK123670-1|BAC85673.1| 276|Homo sapiens protein ( Homo sapiens ... 30 8.6
AF026547-1|AAC80576.1| 1321|Homo sapiens neurocan protein. 30 8.6
AC003110-2|AAB86655.1| 990|Homo sapiens PGCN_HUMAN protein. 30 8.6
AB210004-1|BAE06086.1| 1335|Homo sapiens CSPG3 variant protein p... 30 8.6
>BC013284-1|AAH13284.1| 276|Homo sapiens LOC642031 protein protein.
Length = 276
Score = 37.5 bits (83), Expect = 0.057
Identities = 30/108 (27%), Positives = 43/108 (39%), Gaps = 5/108 (4%)
Frame = +3
Query: 123 RNFRAHPLNDSPALLHPTSDPLRGQNPDEVGGLPRSTLQPDGAAHPKDA-----QPTEPS 287
R+ P +LL P + P++ G L S L P K QP P
Sbjct: 112 RSLLGQPSRPRRSLLRPRQPQRLVEAPEQPGPLTPSLLGPGRPRQQKQPLMGPEQPCPPK 171
Query: 288 RRIEGSETSAVSVRQPVGPPRRCRWCPGIPRWTRTSLPGRDAIHRRPV 431
R + G E +R +GP + C+ P +P R SL G+ RP+
Sbjct: 172 RPLMGPEQPCQPLRPLMGPNKPCKPQPLLPIPDRPSLLGQPGPPCRPL 219
>AK096721-1|BAC04850.1| 180|Homo sapiens protein ( Homo sapiens
cDNA FLJ39402 fis, clone PLACE6011975. ).
Length = 180
Score = 36.3 bits (80), Expect = 0.13
Identities = 23/62 (37%), Positives = 28/62 (45%), Gaps = 1/62 (1%)
Frame = +3
Query: 189 RGQNPDEVGGLPRSTLQPDGAAHPKDAQPTEPSRRIEGSETSAVSV-RQPVGPPRRCRWC 365
RG+ + GG P L G HP +P EP R E + + SV P GP R R C
Sbjct: 83 RGRRQGQGGGAPALLLPRPGCRHPHPPRP-EPRLRAEPGKVTGASVPAPPSGPLPRLRPC 141
Query: 366 PG 371
G
Sbjct: 142 CG 143
>BC113562-1|AAI13563.1| 416|Homo sapiens hepatocyte cell adhesion
molecule protein.
Length = 416
Score = 35.5 bits (78), Expect = 0.23
Identities = 17/34 (50%), Positives = 19/34 (55%)
Frame = -3
Query: 407 PTRQAGSGPAGYSGTPAAPSGRPDGLPYRDGRRF 306
P GP GYS +PA P GR GLP R RR+
Sbjct: 329 PRSATEPGPPGYSVSPAVP-GRSPGLPIRSARRY 361
>BC104831-1|AAI04832.1| 416|Homo sapiens hepatocyte cell adhesion
molecule protein.
Length = 416
Score = 35.5 bits (78), Expect = 0.23
Identities = 17/34 (50%), Positives = 19/34 (55%)
Frame = -3
Query: 407 PTRQAGSGPAGYSGTPAAPSGRPDGLPYRDGRRF 306
P GP GYS +PA P GR GLP R RR+
Sbjct: 329 PRSATEPGPPGYSVSPAVP-GRSPGLPIRSARRY 361
>AY047587-1|AAQ93018.1| 416|Homo sapiens hypothetical protein
protein.
Length = 416
Score = 35.5 bits (78), Expect = 0.23
Identities = 17/34 (50%), Positives = 19/34 (55%)
Frame = -3
Query: 407 PTRQAGSGPAGYSGTPAAPSGRPDGLPYRDGRRF 306
P GP GYS +PA P GR GLP R RR+
Sbjct: 329 PRSATEPGPPGYSVSPAVP-GRSPGLPIRSARRY 361
>AL834419-1|CAD39081.1| 165|Homo sapiens hypothetical protein
protein.
Length = 165
Score = 35.5 bits (78), Expect = 0.23
Identities = 17/34 (50%), Positives = 19/34 (55%)
Frame = -3
Query: 407 PTRQAGSGPAGYSGTPAAPSGRPDGLPYRDGRRF 306
P GP GYS +PA P GR GLP R RR+
Sbjct: 78 PRSATEPGPPGYSVSPAVP-GRSPGLPIRSARRY 110
>AK098396-1|BAC05297.1| 416|Homo sapiens protein ( Homo sapiens
cDNA FLJ25530 fis, clone CBR07652. ).
Length = 416
Score = 35.5 bits (78), Expect = 0.23
Identities = 17/34 (50%), Positives = 19/34 (55%)
Frame = -3
Query: 407 PTRQAGSGPAGYSGTPAAPSGRPDGLPYRDGRRF 306
P GP GYS +PA P GR GLP R RR+
Sbjct: 329 PRSATEPGPPGYSVSPAVP-GRSPGLPIRSARRY 361
>AF129756-17|AAD18086.1| 2157|Homo sapiens BAT2 protein.
Length = 2157
Score = 33.9 bits (74), Expect = 0.70
Identities = 31/107 (28%), Positives = 37/107 (34%), Gaps = 5/107 (4%)
Frame = +3
Query: 120 PRNFRAHPLNDSPALLHPTS-DPLRGQNP--DEVGGLPRSTLQPDGAAHP--KDAQPTEP 284
P R P + A LHP P + +GG S P G + P
Sbjct: 2035 PSPARPFPASLGRAELHPVELKPFQDYQKLSSNLGGPGSSRTPPTGRSFSGLNSRLKATP 2094
Query: 285 SRRIEGSETSAVSVRQPVGPPRRCRWCPGIPRWTRTSLPGRDAIHRR 425
S T V + Q PP RW P W RT LP R+ RR
Sbjct: 2095 STYSGVFRTQRVDLYQQASPPDALRWIP--KPWERTGLPPREGPSRR 2139
>AC006011-2|AAX82033.1| 1336|Homo sapiens unknown protein.
Length = 1336
Score = 33.5 bits (73), Expect = 0.92
Identities = 14/27 (51%), Positives = 15/27 (55%)
Frame = -3
Query: 407 PTRQAGSGPAGYSGTPAAPSGRPDGLP 327
P Q G GP G+ G P P G P GLP
Sbjct: 641 PLHQGGGGPQGFMG-PQGPQGPPQGLP 666
>AB044749-1|BAB32435.1| 1336|Homo sapiens WDC146 protein.
Length = 1336
Score = 33.5 bits (73), Expect = 0.92
Identities = 14/27 (51%), Positives = 15/27 (55%)
Frame = -3
Query: 407 PTRQAGSGPAGYSGTPAAPSGRPDGLP 327
P Q G GP G+ G P P G P GLP
Sbjct: 641 PLHQGGGGPQGFMG-PQGPQGPPQGLP 666
>DQ421853-1|ABD77575.1| 500|Homo sapiens synaptojanin 1 protein.
Length = 500
Score = 32.7 bits (71), Expect = 1.6
Identities = 23/86 (26%), Positives = 38/86 (44%)
Frame = +3
Query: 84 LRSAWCYEQTAGPRNFRAHPLNDSPALLHPTSDPLRGQNPDEVGGLPRSTLQPDGAAHPK 263
+R + +T GP + ++ P++ PA P DP + P PR P A P+
Sbjct: 46 IRPSRAPSRTPGPPSAQSSPIDAQPATPLPQKDPAQPLEPKRPPP-PRPVAPPTRPAPPQ 104
Query: 264 DAQPTEPSRRIEGSETSAVSVRQPVG 341
+P PS R + S + ++ P G
Sbjct: 105 --RPPPPSGRSQPSPQAGLAGPGPAG 128
>M64592-1|AAA59572.1| 554|Homo sapiens macrophage
colony-stimulating factor protein.
Length = 554
Score = 25.8 bits (54), Expect(2) = 1.7
Identities = 20/61 (32%), Positives = 26/61 (42%), Gaps = 5/61 (8%)
Frame = +2
Query: 251 GSPQGRPADGAFEANRRL*NVGRLGT-----AARRAAQTVPLVSRNTPLDQNQPAGSGRD 415
GSPQ RP+ GAF +GT A A +P V + T L ++P G
Sbjct: 276 GSPQPRPSVGAFNPGMEDILDSAMGTNWVPEEASGEASEIP-VPQGTELSPSRPGGGSMQ 334
Query: 416 T 418
T
Sbjct: 335 T 335
Score = 25.4 bits (53), Expect(2) = 1.7
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = +2
Query: 488 TPSGRPLTFTGGSSPLTGAEVGQKP 562
T RP F SSPL + GQ+P
Sbjct: 335 TEPARPSNFLSASSPLPASAKGQQP 359
>M37435-1|AAA52117.1| 554|Homo sapiens CSF1 protein.
Length = 554
Score = 25.8 bits (54), Expect(2) = 1.7
Identities = 20/61 (32%), Positives = 26/61 (42%), Gaps = 5/61 (8%)
Frame = +2
Query: 251 GSPQGRPADGAFEANRRL*NVGRLGT-----AARRAAQTVPLVSRNTPLDQNQPAGSGRD 415
GSPQ RP+ GAF +GT A A +P V + T L ++P G
Sbjct: 276 GSPQPRPSVGAFNPGMEDILDSAMGTNWVPEEASGEASEIP-VPQGTELSPSRPGGGSMQ 334
Query: 416 T 418
T
Sbjct: 335 T 335
Score = 25.4 bits (53), Expect(2) = 1.7
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = +2
Query: 488 TPSGRPLTFTGGSSPLTGAEVGQKP 562
T RP F SSPL + GQ+P
Sbjct: 335 TEPARPSNFLSASSPLPASAKGQQP 359
>BC021117-1|AAH21117.1| 554|Homo sapiens colony stimulating factor
1 (macrophage) protein.
Length = 554
Score = 25.8 bits (54), Expect(2) = 1.7
Identities = 20/61 (32%), Positives = 26/61 (42%), Gaps = 5/61 (8%)
Frame = +2
Query: 251 GSPQGRPADGAFEANRRL*NVGRLGT-----AARRAAQTVPLVSRNTPLDQNQPAGSGRD 415
GSPQ RP+ GAF +GT A A +P V + T L ++P G
Sbjct: 276 GSPQPRPSVGAFNPGMEDILDSAMGTNWVPEEASGEASEIP-VPQGTELSPSRPGGGSMQ 334
Query: 416 T 418
T
Sbjct: 335 T 335
Score = 25.4 bits (53), Expect(2) = 1.7
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = +2
Query: 488 TPSGRPLTFTGGSSPLTGAEVGQKP 562
T RP F SSPL + GQ+P
Sbjct: 335 TEPARPSNFLSASSPLPASAKGQQP 359
>AL450468-2|CAH71146.1| 554|Homo sapiens colony stimulating factor
1 (macrophage) protein.
Length = 554
Score = 25.8 bits (54), Expect(2) = 1.7
Identities = 20/61 (32%), Positives = 26/61 (42%), Gaps = 5/61 (8%)
Frame = +2
Query: 251 GSPQGRPADGAFEANRRL*NVGRLGT-----AARRAAQTVPLVSRNTPLDQNQPAGSGRD 415
GSPQ RP+ GAF +GT A A +P V + T L ++P G
Sbjct: 276 GSPQPRPSVGAFNPGMEDILDSAMGTNWVPEEASGEASEIP-VPQGTELSPSRPGGGSMQ 334
Query: 416 T 418
T
Sbjct: 335 T 335
Score = 25.4 bits (53), Expect(2) = 1.7
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = +2
Query: 488 TPSGRPLTFTGGSSPLTGAEVGQKP 562
T RP F SSPL + GQ+P
Sbjct: 335 TEPARPSNFLSASSPLPASAKGQQP 359
>M27087-1|AAA59573.1| 553|Homo sapiens macrophage
colony-stimulating factor protein.
Length = 553
Score = 25.8 bits (54), Expect(2) = 1.7
Identities = 20/61 (32%), Positives = 26/61 (42%), Gaps = 5/61 (8%)
Frame = +2
Query: 251 GSPQGRPADGAFEANRRL*NVGRLGT-----AARRAAQTVPLVSRNTPLDQNQPAGSGRD 415
GSPQ RP+ GAF +GT A A +P V + T L ++P G
Sbjct: 276 GSPQPRPSVGAFNPGMEDILDSAMGTNWVPEEASGEASEIP-VPQGTELSPSRPGGGSMQ 334
Query: 416 T 418
T
Sbjct: 335 T 335
Score = 25.4 bits (53), Expect(2) = 1.7
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = +2
Query: 488 TPSGRPLTFTGGSSPLTGAEVGQKP 562
T RP F SSPL + GQ+P
Sbjct: 335 TEPARPSNFLSASSPLPASAKGQQP 359
>X05825-1|CAA29265.1| 536|Homo sapiens CSF-4 protein.
Length = 536
Score = 25.8 bits (54), Expect(2) = 1.7
Identities = 20/61 (32%), Positives = 26/61 (42%), Gaps = 5/61 (8%)
Frame = +2
Query: 251 GSPQGRPADGAFEANRRL*NVGRLGT-----AARRAAQTVPLVSRNTPLDQNQPAGSGRD 415
GSPQ RP+ GAF +GT A A +P V + T L ++P G
Sbjct: 258 GSPQPRPSVGAFNPGMEDILDSAMGTNWVPEEASGEASEIP-VPQGTELSPSRPGGGSMQ 316
Query: 416 T 418
T
Sbjct: 317 T 317
Score = 25.4 bits (53), Expect(2) = 1.7
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = +2
Query: 488 TPSGRPLTFTGGSSPLTGAEVGQKP 562
T RP F SSPL + GQ+P
Sbjct: 317 TEPARPSNFLSASSPLPASAKGQQP 341
>AB208952-1|BAD92189.1| 515|Homo sapiens colony stimulating factor
1 isoform a precursor variant protein.
Length = 515
Score = 25.8 bits (54), Expect(2) = 1.7
Identities = 20/61 (32%), Positives = 26/61 (42%), Gaps = 5/61 (8%)
Frame = +2
Query: 251 GSPQGRPADGAFEANRRL*NVGRLGT-----AARRAAQTVPLVSRNTPLDQNQPAGSGRD 415
GSPQ RP+ GAF +GT A A +P V + T L ++P G
Sbjct: 330 GSPQPRPSVGAFNPGMEDILDSAMGTNWVPEEASGEASEIP-VPQGTELSPSRPGGGSMQ 388
Query: 416 T 418
T
Sbjct: 389 T 389
Score = 25.4 bits (53), Expect(2) = 1.7
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = +2
Query: 488 TPSGRPLTFTGGSSPLTGAEVGQKP 562
T RP F SSPL + GQ+P
Sbjct: 389 TEPARPSNFLSASSPLPASAKGQQP 413
>U22386-1|AAA64849.1| 438|Homo sapiens macrophage-colony
stimulating factor gamma precursor protein.
Length = 438
Score = 25.8 bits (54), Expect(2) = 1.7
Identities = 20/61 (32%), Positives = 26/61 (42%), Gaps = 5/61 (8%)
Frame = +2
Query: 251 GSPQGRPADGAFEANRRL*NVGRLGT-----AARRAAQTVPLVSRNTPLDQNQPAGSGRD 415
GSPQ RP+ GAF +GT A A +P V + T L ++P G
Sbjct: 276 GSPQPRPSVGAFNPGMEDILDSAMGTNWVPEEASGEASEIP-VPQGTELSPSRPGGGSMQ 334
Query: 416 T 418
T
Sbjct: 335 T 335
Score = 25.4 bits (53), Expect(2) = 1.7
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = +2
Query: 488 TPSGRPLTFTGGSSPLTGAEVGQKP 562
T RP F SSPL + GQ+P
Sbjct: 335 TEPARPSNFLSASSPLPASAKGQQP 359
>AL450468-1|CAH71147.1| 438|Homo sapiens colony stimulating factor
1 (macrophage) protein.
Length = 438
Score = 25.8 bits (54), Expect(2) = 1.7
Identities = 20/61 (32%), Positives = 26/61 (42%), Gaps = 5/61 (8%)
Frame = +2
Query: 251 GSPQGRPADGAFEANRRL*NVGRLGT-----AARRAAQTVPLVSRNTPLDQNQPAGSGRD 415
GSPQ RP+ GAF +GT A A +P V + T L ++P G
Sbjct: 276 GSPQPRPSVGAFNPGMEDILDSAMGTNWVPEEASGEASEIP-VPQGTELSPSRPGGGSMQ 334
Query: 416 T 418
T
Sbjct: 335 T 335
Score = 25.4 bits (53), Expect(2) = 1.7
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = +2
Query: 488 TPSGRPLTFTGGSSPLTGAEVGQKP 562
T RP F SSPL + GQ+P
Sbjct: 335 TEPARPSNFLSASSPLPASAKGQQP 359
>AL162741-4|CAI23246.1| 255|Homo sapiens tumor necrosis factor
receptor superfamily, member 18 protein.
Length = 255
Score = 32.3 bits (70), Expect = 2.1
Identities = 15/47 (31%), Positives = 23/47 (48%)
Frame = +3
Query: 240 PDGAAHPKDAQPTEPSRRIEGSETSAVSVRQPVGPPRRCRWCPGIPR 380
P+ A+ P+ + ++ RR G ET +P GPP PG P+
Sbjct: 145 PEAASSPRKSGASDRQRRRGGWETCGCEPGRPPGPPTAASPSPGAPQ 191
>AF241229-1|AAF63506.1| 255|Homo sapiens GITR-D protein.
Length = 255
Score = 32.3 bits (70), Expect = 2.1
Identities = 15/47 (31%), Positives = 23/47 (48%)
Frame = +3
Query: 240 PDGAAHPKDAQPTEPSRRIEGSETSAVSVRQPVGPPRRCRWCPGIPR 380
P+ A+ P+ + ++ RR G ET +P GPP PG P+
Sbjct: 145 PEAASSPRKSGASDRQRRRGGWETCGCEPGRPPGPPTAASPSPGAPQ 191
>BC039260-1|AAH39260.1| 765|Homo sapiens RBM12B protein protein.
Length = 765
Score = 31.9 bits (69), Expect = 2.8
Identities = 25/83 (30%), Positives = 34/83 (40%), Gaps = 7/83 (8%)
Frame = +3
Query: 126 NFRAHPLNDSPALLHPTSDPLRGQNPDEVGGLPRSTL----QPDGAAHPKDAQPTEPSRR 293
+FR P +D HP + R P+ GGLP+ST Q HP+ P R
Sbjct: 602 DFRCPPEDD---FRHPREEDWRRPPPEHFGGLPQSTSGGHPQSTSGGHPQSISGARP-RS 657
Query: 294 IEGSETSAVS---VRQPVGPPRR 353
G ++S +R G P R
Sbjct: 658 TSGDRPRSISGGHLRSISGAPER 680
>AF009040-1|AAC51922.1| 1575|Homo sapiens synaptojanin protein.
Length = 1575
Score = 31.9 bits (69), Expect = 2.8
Identities = 28/110 (25%), Positives = 41/110 (37%), Gaps = 2/110 (1%)
Frame = +3
Query: 84 LRSAWCYEQTAGPRNFRAHPLNDSPALLHPTSDPLRGQNPDEVGGLPRSTLQPDGAAHPK 263
+R + +T GP + ++ P++ PA P DP + P PR P A P+
Sbjct: 1066 IRPSRAPSRTPGPPSAQSSPIDAQPATPLPQKDPAQPLEPKRPPP-PRPVAPPTRPAPPQ 1124
Query: 264 DAQPTEPSRRIEGSETSAVSVRQPVGP--PRRCRWCPGIPRWTRTSLPGR 407
P +R + + P P RR P P TR GR
Sbjct: 1125 RPPPPSGARSPAPTRKEFGGIGAPPSPGVARREMEAPKSPGTTRKDNIGR 1174
>AF009039-1|AAC51921.1| 1311|Homo sapiens synaptojanin protein.
Length = 1311
Score = 31.9 bits (69), Expect = 2.8
Identities = 28/110 (25%), Positives = 41/110 (37%), Gaps = 2/110 (1%)
Frame = +3
Query: 84 LRSAWCYEQTAGPRNFRAHPLNDSPALLHPTSDPLRGQNPDEVGGLPRSTLQPDGAAHPK 263
+R + +T GP + ++ P++ PA P DP + P PR P A P+
Sbjct: 1066 IRPSRAPSRTPGPPSAQSSPIDAQPATPLPQKDPAQPLEPKRPPP-PRPVAPPTRPAPPQ 1124
Query: 264 DAQPTEPSRRIEGSETSAVSVRQPVGP--PRRCRWCPGIPRWTRTSLPGR 407
P +R + + P P RR P P TR GR
Sbjct: 1125 RPPPPSGARSPAPTRKEFGGIGAPPSPGVARREMEAPKSPGTTRKDNIGR 1174
>M33518-1|AAA35586.1| 2142|Homo sapiens protein ( Human
HLA-B-associated transcript 2 (BAT2) gene, 3' end. ).
Length = 2142
Score = 31.1 bits (67), Expect = 4.9
Identities = 30/107 (28%), Positives = 36/107 (33%), Gaps = 5/107 (4%)
Frame = +3
Query: 120 PRNFRAHPLNDSPALLHPTS-DPLRGQNP--DEVGGLPRSTLQPDGAAHP--KDAQPTEP 284
P R P + A LHP P + +GG S P G + P
Sbjct: 2020 PSPARPFPASLGRAELHPVELKPFQDYQKLSSNLGGPGSSRTPPTGRSFSGLNSRLKATP 2079
Query: 285 SRRIEGSETSAVSVRQPVGPPRRCRWCPGIPRWTRTSLPGRDAIHRR 425
S T V + Q PP RW P W RT P R+ RR
Sbjct: 2080 STYSGVFRTQRVDLYQQASPPDALRWIP--KPWERTGPPPREGPSRR 2124
>M33509-1|AAA35585.1| 2142|Homo sapiens protein ( Human
HLA-B-associated transcript 2 (BAT2) mRNA, complete cds.
).
Length = 2142
Score = 31.1 bits (67), Expect = 4.9
Identities = 30/107 (28%), Positives = 36/107 (33%), Gaps = 5/107 (4%)
Frame = +3
Query: 120 PRNFRAHPLNDSPALLHPTS-DPLRGQNP--DEVGGLPRSTLQPDGAAHP--KDAQPTEP 284
P R P + A LHP P + +GG S P G + P
Sbjct: 2020 PSPARPFPASLGRAELHPVELKPFQDYQKLSSNLGGPGSSRTPPTGRSFSGLNSRLKATP 2079
Query: 285 SRRIEGSETSAVSVRQPVGPPRRCRWCPGIPRWTRTSLPGRDAIHRR 425
S T V + Q PP RW P W RT P R+ RR
Sbjct: 2080 STYSGVFRTQRVDLYQQASPPDALRWIP--KPWERTGPPPREGPSRR 2124
>BX511262-1|CAI95572.1| 2157|Homo sapiens HLA-B associated transcript
2 protein.
Length = 2157
Score = 31.1 bits (67), Expect = 4.9
Identities = 30/107 (28%), Positives = 36/107 (33%), Gaps = 5/107 (4%)
Frame = +3
Query: 120 PRNFRAHPLNDSPALLHPTS-DPLRGQNP--DEVGGLPRSTLQPDGAAHP--KDAQPTEP 284
P R P + A LHP P + +GG S P G + P
Sbjct: 2035 PSPARPFPASLGRAELHPVELKPFQDYQKLSSNLGGPGSSRTPPTGRSFSGLNSRLKATP 2094
Query: 285 SRRIEGSETSAVSVRQPVGPPRRCRWCPGIPRWTRTSLPGRDAIHRR 425
S T V + Q PP RW P W RT P R+ RR
Sbjct: 2095 STYSGVFRTQRVDLYQQASPPDALRWIP--KPWERTGPPPREGPSRR 2139
>BC060668-1|AAH60668.1| 2157|Homo sapiens HLA-B associated transcript
2 protein.
Length = 2157
Score = 31.1 bits (67), Expect = 4.9
Identities = 30/107 (28%), Positives = 36/107 (33%), Gaps = 5/107 (4%)
Frame = +3
Query: 120 PRNFRAHPLNDSPALLHPTS-DPLRGQNP--DEVGGLPRSTLQPDGAAHP--KDAQPTEP 284
P R P + A LHP P + +GG S P G + P
Sbjct: 2035 PSPARPFPASLGRAELHPVELKPFQDYQKLSSNLGGPGSSRTPPTGRSFSGLNSRLKATP 2094
Query: 285 SRRIEGSETSAVSVRQPVGPPRRCRWCPGIPRWTRTSLPGRDAIHRR 425
S T V + Q PP RW P W RT P R+ RR
Sbjct: 2095 STYSGVFRTQRVDLYQQASPPDALRWIP--KPWERTGPPPREGPSRR 2139
>BC042295-1|AAH42295.1| 2157|Homo sapiens BAT2 protein protein.
Length = 2157
Score = 31.1 bits (67), Expect = 4.9
Identities = 30/107 (28%), Positives = 36/107 (33%), Gaps = 5/107 (4%)
Frame = +3
Query: 120 PRNFRAHPLNDSPALLHPTS-DPLRGQNP--DEVGGLPRSTLQPDGAAHP--KDAQPTEP 284
P R P + A LHP P + +GG S P G + P
Sbjct: 2035 PSPARPFPASLGRAELHPVELKPFQDYQKLSSNLGGPGSSRTPPTGRSFSGLNSRLKATP 2094
Query: 285 SRRIEGSETSAVSVRQPVGPPRRCRWCPGIPRWTRTSLPGRDAIHRR 425
S T V + Q PP RW P W RT P R+ RR
Sbjct: 2095 STYSGVFRTQRVDLYQQASPPDALRWIP--KPWERTGPPPREGPSRR 2139
>BC030127-1|AAH30127.1| 696|Homo sapiens Similar to HLA-B
associated transcript 2 protein.
Length = 696
Score = 31.1 bits (67), Expect = 4.9
Identities = 30/107 (28%), Positives = 36/107 (33%), Gaps = 5/107 (4%)
Frame = +3
Query: 120 PRNFRAHPLNDSPALLHPTS-DPLRGQNP--DEVGGLPRSTLQPDGAAHP--KDAQPTEP 284
P R P + A LHP P + +GG S P G + P
Sbjct: 574 PSPARPFPASLGRAELHPVELKPFQDYQKLSSNLGGPGSSRTPPTGRSFSGLNSRLKATP 633
Query: 285 SRRIEGSETSAVSVRQPVGPPRRCRWCPGIPRWTRTSLPGRDAIHRR 425
S T V + Q PP RW P W RT P R+ RR
Sbjct: 634 STYSGVFRTQRVDLYQQASPPDALRWIP--KPWERTGPPPREGPSRR 678
>BA000025-31|BAB63391.1| 2157|Homo sapiens BAT2 protein.
Length = 2157
Score = 31.1 bits (67), Expect = 4.9
Identities = 30/107 (28%), Positives = 36/107 (33%), Gaps = 5/107 (4%)
Frame = +3
Query: 120 PRNFRAHPLNDSPALLHPTS-DPLRGQNP--DEVGGLPRSTLQPDGAAHP--KDAQPTEP 284
P R P + A LHP P + +GG S P G + P
Sbjct: 2035 PSPARPFPASLGRAELHPVELKPFQDYQKLSSNLGGPGSSRTPPTGRSFSGLNSRLKATP 2094
Query: 285 SRRIEGSETSAVSVRQPVGPPRRCRWCPGIPRWTRTSLPGRDAIHRR 425
S T V + Q PP RW P W RT P R+ RR
Sbjct: 2095 STYSGVFRTQRVDLYQQASPPDALRWIP--KPWERTGPPPREGPSRR 2139
>AL805934-4|CAI18500.1| 2157|Homo sapiens HLA-B associated transcript
2 protein.
Length = 2157
Score = 31.1 bits (67), Expect = 4.9
Identities = 30/107 (28%), Positives = 36/107 (33%), Gaps = 5/107 (4%)
Frame = +3
Query: 120 PRNFRAHPLNDSPALLHPTS-DPLRGQNP--DEVGGLPRSTLQPDGAAHP--KDAQPTEP 284
P R P + A LHP P + +GG S P G + P
Sbjct: 2035 PSPARPFPASLGRAELHPVELKPFQDYQKLSSNLGGPGSSRTPPTGRSFSGLNSRLKATP 2094
Query: 285 SRRIEGSETSAVSVRQPVGPPRRCRWCPGIPRWTRTSLPGRDAIHRR 425
S T V + Q PP RW P W RT P R+ RR
Sbjct: 2095 STYSGVFRTQRVDLYQQASPPDALRWIP--KPWERTGPPPREGPSRR 2139
>AL662847-63|CAI17698.2| 2157|Homo sapiens HLA-B associated transcript
2 protein.
Length = 2157
Score = 31.1 bits (67), Expect = 4.9
Identities = 30/107 (28%), Positives = 36/107 (33%), Gaps = 5/107 (4%)
Frame = +3
Query: 120 PRNFRAHPLNDSPALLHPTS-DPLRGQNP--DEVGGLPRSTLQPDGAAHP--KDAQPTEP 284
P R P + A LHP P + +GG S P G + P
Sbjct: 2035 PSPARPFPASLGRAELHPVELKPFQDYQKLSSNLGGPGSSRTPPTGRSFSGLNSRLKATP 2094
Query: 285 SRRIEGSETSAVSVRQPVGPPRRCRWCPGIPRWTRTSLPGRDAIHRR 425
S T V + Q PP RW P W RT P R+ RR
Sbjct: 2095 STYSGVFRTQRVDLYQQASPPDALRWIP--KPWERTGPPPREGPSRR 2139
>AL662801-47|CAI18313.1| 2157|Homo sapiens HLA-B associated transcript
2 protein.
Length = 2157
Score = 31.1 bits (67), Expect = 4.9
Identities = 30/107 (28%), Positives = 36/107 (33%), Gaps = 5/107 (4%)
Frame = +3
Query: 120 PRNFRAHPLNDSPALLHPTS-DPLRGQNP--DEVGGLPRSTLQPDGAAHP--KDAQPTEP 284
P R P + A LHP P + +GG S P G + P
Sbjct: 2035 PSPARPFPASLGRAELHPVELKPFQDYQKLSSNLGGPGSSRTPPTGRSFSGLNSRLKATP 2094
Query: 285 SRRIEGSETSAVSVRQPVGPPRRCRWCPGIPRWTRTSLPGRDAIHRR 425
S T V + Q PP RW P W RT P R+ RR
Sbjct: 2095 STYSGVFRTQRVDLYQQASPPDALRWIP--KPWERTGPPPREGPSRR 2139
>AB210034-1|BAE06116.1| 1537|Homo sapiens C6orf21 variant protein
protein.
Length = 1537
Score = 31.1 bits (67), Expect = 4.9
Identities = 30/107 (28%), Positives = 36/107 (33%), Gaps = 5/107 (4%)
Frame = +3
Query: 120 PRNFRAHPLNDSPALLHPTS-DPLRGQNP--DEVGGLPRSTLQPDGAAHP--KDAQPTEP 284
P R P + A LHP P + +GG S P G + P
Sbjct: 1415 PSPARPFPASLGRAELHPVELKPFQDYQKLSSNLGGPGSSRTPPTGRSFSGLNSRLKATP 1474
Query: 285 SRRIEGSETSAVSVRQPVGPPRRCRWCPGIPRWTRTSLPGRDAIHRR 425
S T V + Q PP RW P W RT P R+ RR
Sbjct: 1475 STYSGVFRTQRVDLYQQASPPDALRWIP--KPWERTGPPPREGPSRR 1519
>BC030225-1|AAH30225.1| 134|Homo sapiens SNX22 protein protein.
Length = 134
Score = 30.7 bits (66), Expect = 6.5
Identities = 17/37 (45%), Positives = 21/37 (56%)
Frame = +3
Query: 288 RRIEGSETSAVSVRQPVGPPRRCRWCPGIPRWTRTSL 398
R +EG + S VRQPV P R R PG PR + +L
Sbjct: 96 RALEGPQGSEGQVRQPVLPGVRERRVPGQPRRRKAAL 132
>BC028012-1|AAH28012.1| 670|Homo sapiens PML-RARA regulated adaptor
molecule 1 protein.
Length = 670
Score = 30.7 bits (66), Expect = 6.5
Identities = 19/46 (41%), Positives = 26/46 (56%), Gaps = 3/46 (6%)
Frame = +3
Query: 207 EVGGLPRSTLQPDGAAHP-KDAQPTE--PSRRIEGSETSAVSVRQP 335
E+GGLPR++ +P+ + P K QP P R+ E SAV R P
Sbjct: 325 ELGGLPRTSSEPEFNSLPRKLLQPERRGPPRKFSQPEPSAVLKRHP 370
>AY258142-1|AAP45947.1| 737|Homo sapiens small-conductance
calcium-activated potassium channel SK3 protein.
Length = 737
Score = 30.7 bits (66), Expect = 6.5
Identities = 20/58 (34%), Positives = 30/58 (51%), Gaps = 4/58 (6%)
Frame = +3
Query: 114 AGPRNFRAHPLNDSPALLHPTSDPLRGQNPDE--VGGLPRSTLQ--PDGAAHPKDAQP 275
+ P FRA P ++S A+LHP+S N ++ +G P ST P G + + A P
Sbjct: 109 SSPTAFRAPPSSNSTAILHPSSRQGSQLNLNDHLLGHSPSSTATSGPGGGSRHRQASP 166
>AY049734-1|AAL10706.1| 737|Homo sapiens small-conductance
calcium-activated potassium channel SK3 protein.
Length = 737
Score = 30.7 bits (66), Expect = 6.5
Identities = 20/58 (34%), Positives = 30/58 (51%), Gaps = 4/58 (6%)
Frame = +3
Query: 114 AGPRNFRAHPLNDSPALLHPTSDPLRGQNPDE--VGGLPRSTLQ--PDGAAHPKDAQP 275
+ P FRA P ++S A+LHP+S N ++ +G P ST P G + + A P
Sbjct: 109 SSPTAFRAPPSSNSTAILHPSSRQGSQLNLNDHLLGHSPSSTATSGPGGGSRHRQASP 166
>AL954342-3|CAH72739.1| 731|Homo sapiens potassium
intermediate/small conductance calcium-activated
channel, subfamily N protein.
Length = 731
Score = 30.7 bits (66), Expect = 6.5
Identities = 20/58 (34%), Positives = 30/58 (51%), Gaps = 4/58 (6%)
Frame = +3
Query: 114 AGPRNFRAHPLNDSPALLHPTSDPLRGQNPDE--VGGLPRSTLQ--PDGAAHPKDAQP 275
+ P FRA P ++S A+LHP+S N ++ +G P ST P G + + A P
Sbjct: 103 SSPTAFRAPPSSNSTAILHPSSRQGSQLNLNDHLLGHSPSSTATSGPGGGSRHRQASP 160
>AL606500-5|CAH71911.1| 731|Homo sapiens potassium
intermediate/small conductance calcium-activated
channel, subfamily N protein.
Length = 731
Score = 30.7 bits (66), Expect = 6.5
Identities = 20/58 (34%), Positives = 30/58 (51%), Gaps = 4/58 (6%)
Frame = +3
Query: 114 AGPRNFRAHPLNDSPALLHPTSDPLRGQNPDE--VGGLPRSTLQ--PDGAAHPKDAQP 275
+ P FRA P ++S A+LHP+S N ++ +G P ST P G + + A P
Sbjct: 103 SSPTAFRAPPSSNSTAILHPSSRQGSQLNLNDHLLGHSPSSTATSGPGGGSRHRQASP 160
>AL390204-3|CAH71151.1| 731|Homo sapiens potassium
intermediate/small conductance calcium-activated
channel, subfamily N protein.
Length = 731
Score = 30.7 bits (66), Expect = 6.5
Identities = 20/58 (34%), Positives = 30/58 (51%), Gaps = 4/58 (6%)
Frame = +3
Query: 114 AGPRNFRAHPLNDSPALLHPTSDPLRGQNPDE--VGGLPRSTLQ--PDGAAHPKDAQP 275
+ P FRA P ++S A+LHP+S N ++ +G P ST P G + + A P
Sbjct: 103 SSPTAFRAPPSSNSTAILHPSSRQGSQLNLNDHLLGHSPSSTATSGPGGGSRHRQASP 160
>AJ272324-1|CAC17767.1| 718|Homo sapiens adaptor molecule-1
protein.
Length = 718
Score = 30.7 bits (66), Expect = 6.5
Identities = 19/46 (41%), Positives = 26/46 (56%), Gaps = 3/46 (6%)
Frame = +3
Query: 207 EVGGLPRSTLQPDGAAHP-KDAQPTE--PSRRIEGSETSAVSVRQP 335
E+GGLPR++ +P+ + P K QP P R+ E SAV R P
Sbjct: 373 ELGGLPRTSSEPEFNSLPRKLLQPERRGPPRKFSQPEPSAVLKRHP 418
>AJ251016-1|CAB61331.1| 736|Homo sapiens SK3 protein protein.
Length = 736
Score = 30.7 bits (66), Expect = 6.5
Identities = 20/58 (34%), Positives = 30/58 (51%), Gaps = 4/58 (6%)
Frame = +3
Query: 114 AGPRNFRAHPLNDSPALLHPTSDPLRGQNPDE--VGGLPRSTLQ--PDGAAHPKDAQP 275
+ P FRA P ++S A+LHP+S N ++ +G P ST P G + + A P
Sbjct: 108 SSPTAFRAPPSSNSTAILHPSSRQGSQLNLNDHLLGHSPSSTATSGPGGGSRHRQASP 165
>AF336797-1|AAK15345.1| 736|Homo sapiens small-conductance
calcium-activated potassium channel protein.
Length = 736
Score = 30.7 bits (66), Expect = 6.5
Identities = 20/58 (34%), Positives = 30/58 (51%), Gaps = 4/58 (6%)
Frame = +3
Query: 114 AGPRNFRAHPLNDSPALLHPTSDPLRGQNPDE--VGGLPRSTLQ--PDGAAHPKDAQP 275
+ P FRA P ++S A+LHP+S N ++ +G P ST P G + + A P
Sbjct: 108 SSPTAFRAPPSSNSTAILHPSSRQGSQLNLNDHLLGHSPSSTATSGPGGGSRHRQASP 165
>AF182077-1|AAF62874.1| 1509|Homo sapiens glioma tumor suppressor
candidate region protein 1 protein.
Length = 1509
Score = 30.7 bits (66), Expect = 6.5
Identities = 28/84 (33%), Positives = 34/84 (40%)
Frame = +3
Query: 153 SPALLHPTSDPLRGQNPDEVGGLPRSTLQPDGAAHPKDAQPTEPSRRIEGSETSAVSVRQ 332
+PA P + PL+G P LP D + H PT P R S +VS R
Sbjct: 706 APAPQIPAAAPLKGPGPSSSPSLPHQAPLGD-SPHLPSPHPTRPPSR-PPSRPQSVS-RP 762
Query: 333 PVGPPRRCRWCPGIPRWTRTSLPG 404
P PP CP P +LPG
Sbjct: 763 PSEPP--LHPCP--PPQAPPTLPG 782
>AF031815-1|AAC26099.1| 731|Homo sapiens calcium-activated
potassium channel protein.
Length = 731
Score = 30.7 bits (66), Expect = 6.5
Identities = 20/58 (34%), Positives = 30/58 (51%), Gaps = 4/58 (6%)
Frame = +3
Query: 114 AGPRNFRAHPLNDSPALLHPTSDPLRGQNPDE--VGGLPRSTLQ--PDGAAHPKDAQP 275
+ P FRA P ++S A+LHP+S N ++ +G P ST P G + + A P
Sbjct: 103 SSPTAFRAPPSSNSTAILHPSSRQGSQLNLNDHLLGHSPSSTATSGPGGGSRHRQASP 160
>M55172-1|AAA62824.1| 2316|Homo sapiens large aggregating cartilage
proteoglycan core protein protein.
Length = 2316
Score = 26.6 bits (56), Expect(2) = 7.3
Identities = 14/30 (46%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
Frame = -3
Query: 422 TVYRVPTRQ-AGSGPAGYSGTPAAPSGRPD 336
+V + PT Q AG GP+G A SG PD
Sbjct: 1829 SVTQAPTAQEAGEGPSGILELSGAHSGAPD 1858
Score = 22.2 bits (45), Expect(2) = 7.3
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = -3
Query: 353 PSGRPDGLPYRDG 315
PSG P G PY G
Sbjct: 1879 PSGEPPGTPYFSG 1891
>X17406-1|CAA35463.1| 600|Homo sapiens cartilage specific
proteoglycan (600 AA) protein.
Length = 600
Score = 26.6 bits (56), Expect(2) = 8.1
Identities = 14/30 (46%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
Frame = -3
Query: 422 TVYRVPTRQ-AGSGPAGYSGTPAAPSGRPD 336
+V + PT Q AG GP+G A SG PD
Sbjct: 52 SVTQAPTAQEAGEGPSGILELSGAHSGAPD 81
Score = 22.2 bits (45), Expect(2) = 8.1
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = -3
Query: 353 PSGRPDGLPYRDG 315
PSG P G PY G
Sbjct: 102 PSGEPPGTPYFSG 114
>BC132861-1|AAI32862.1| 276|Homo sapiens hypothetical protein
LOC339524 protein.
Length = 276
Score = 30.3 bits (65), Expect = 8.6
Identities = 27/96 (28%), Positives = 38/96 (39%), Gaps = 4/96 (4%)
Frame = +3
Query: 171 PTSDPLRGQNPDEVGGL-PRSTLQPDG---AAHPKDAQPTEPSRRIEGSETSAVSVRQPV 338
P++ P G+ P GG PR G AA P RR G A P
Sbjct: 84 PSASPRSGRGPGRGGGRRPRLGAARSGCPGAAAAGGPAVLHPWRRAGGRVRGA----SPP 139
Query: 339 GPPRRCRWCPGIPRWTRTSLPGRDAIHRRPVALFTP 446
P+ R P RW+ + +PG +I+ P++ P
Sbjct: 140 QGPQTARGFPLPSRWSSSPIPGCISIYPSPISFAHP 175
>BC126240-1|AAI26241.1| 276|Homo sapiens hypothetical protein
LOC339524 protein.
Length = 276
Score = 30.3 bits (65), Expect = 8.6
Identities = 27/96 (28%), Positives = 38/96 (39%), Gaps = 4/96 (4%)
Frame = +3
Query: 171 PTSDPLRGQNPDEVGGL-PRSTLQPDG---AAHPKDAQPTEPSRRIEGSETSAVSVRQPV 338
P++ P G+ P GG PR G AA P RR G A P
Sbjct: 84 PSASPRSGRGPGRGGGRRPRLGAARSGCPGAAAAGGPAVLHPWRRAGGRVRGA----SPP 139
Query: 339 GPPRRCRWCPGIPRWTRTSLPGRDAIHRRPVALFTP 446
P+ R P RW+ + +PG +I+ P++ P
Sbjct: 140 QGPQTARGFPLPSRWSSSPIPGCISIYPSPISFAHP 175
>BC110827-1|AAI10828.1| 132|Homo sapiens DENND3 protein protein.
Length = 132
Score = 30.3 bits (65), Expect = 8.6
Identities = 13/23 (56%), Positives = 14/23 (60%), Gaps = 2/23 (8%)
Frame = +3
Query: 345 PRRCRWCPGIPRWT--RTSLPGR 407
P RC W PG P T RT+ PGR
Sbjct: 106 PSRCAWSPGFPITTPSRTAFPGR 128
>BC068551-1|AAH68551.1| 582|Homo sapiens LYN protein protein.
Length = 582
Score = 30.3 bits (65), Expect = 8.6
Identities = 15/40 (37%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
Frame = +3
Query: 240 PDGAAHPKDAQP--TEPSRRIEGSETSAVSVRQPVGPPRR 353
P A P+ +P + PS R++ S +A P GPPRR
Sbjct: 29 PRQAGRPRHPRPRASSPSPRVQRSRPAASPYAGPAGPPRR 68
>BC059394-1|AAH59394.1| 582|Homo sapiens LYN protein protein.
Length = 582
Score = 30.3 bits (65), Expect = 8.6
Identities = 15/40 (37%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
Frame = +3
Query: 240 PDGAAHPKDAQP--TEPSRRIEGSETSAVSVRQPVGPPRR 353
P A P+ +P + PS R++ S +A P GPPRR
Sbjct: 29 PRQAGRPRHPRPRASSPSPRVQRSRPAASPYAGPAGPPRR 68
>AK123670-1|BAC85673.1| 276|Homo sapiens protein ( Homo sapiens
cDNA FLJ41676 fis, clone HCASM2002502. ).
Length = 276
Score = 30.3 bits (65), Expect = 8.6
Identities = 27/96 (28%), Positives = 38/96 (39%), Gaps = 4/96 (4%)
Frame = +3
Query: 171 PTSDPLRGQNPDEVGGL-PRSTLQPDG---AAHPKDAQPTEPSRRIEGSETSAVSVRQPV 338
P++ P G+ P GG PR G AA P RR G A P
Sbjct: 84 PSASPRSGRGPGRGGGRRPRLGAARSGCPGAAAAGGPAVLHPWRRAGGRVRGA----SPP 139
Query: 339 GPPRRCRWCPGIPRWTRTSLPGRDAIHRRPVALFTP 446
P+ R P RW+ + +PG +I+ P++ P
Sbjct: 140 QGPQTARGFPLPSRWSSSPIPGCISIYPSPISFAHP 175
>AF026547-1|AAC80576.1| 1321|Homo sapiens neurocan protein.
Length = 1321
Score = 30.3 bits (65), Expect = 8.6
Identities = 16/41 (39%), Positives = 21/41 (51%)
Frame = -3
Query: 467 QHSSALPWSK*SDRSTVYRVPTRQAGSGPAGYSGTPAAPSG 345
+HSS+ PW + V VPT A + P G G P + SG
Sbjct: 720 EHSSSSPWPSVNRNVAVGFVPTETA-TEPTGLRGIPGSESG 759
>AC003110-2|AAB86655.1| 990|Homo sapiens PGCN_HUMAN protein.
Length = 990
Score = 30.3 bits (65), Expect = 8.6
Identities = 16/41 (39%), Positives = 21/41 (51%)
Frame = -3
Query: 467 QHSSALPWSK*SDRSTVYRVPTRQAGSGPAGYSGTPAAPSG 345
+HSS+ PW + V VPT A + P G G P + SG
Sbjct: 720 EHSSSSPWPSVNRNVAVGFVPTETA-TEPTGLRGIPGSESG 759
>AB210004-1|BAE06086.1| 1335|Homo sapiens CSPG3 variant protein
protein.
Length = 1335
Score = 30.3 bits (65), Expect = 8.6
Identities = 16/41 (39%), Positives = 21/41 (51%)
Frame = -3
Query: 467 QHSSALPWSK*SDRSTVYRVPTRQAGSGPAGYSGTPAAPSG 345
+HSS+ PW + V VPT A + P G G P + SG
Sbjct: 734 EHSSSSPWPSVNRNVAVGFVPTETA-TEPTGLRGIPGSESG 773
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 119,383,774
Number of Sequences: 237096
Number of extensions: 2912882
Number of successful extensions: 11718
Number of sequences better than 10.0: 59
Number of HSP's better than 10.0 without gapping: 9273
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11652
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10036353240
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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