Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP10_T7_N03
(792 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown prot... 97 2e-20
X17551-2|CAA35587.1| 888|Drosophila melanogaster protein ( D.me... 83 3e-16
AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p pro... 83 3e-16
M22874-2|AAA28675.1| 916|Drosophila melanogaster protein ( D.me... 81 2e-15
AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p pro... 81 2e-15
AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein. 76 6e-14
AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse tran... 76 6e-14
M17214-2|AAA28508.1| 858|Drosophila melanogaster protein ( D.me... 71 2e-12
AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p pro... 67 3e-11
AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein ... 57 2e-08
AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein ... 57 2e-08
AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein ... 57 2e-08
AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein ... 57 3e-08
AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein ... 50 5e-06
U02279-1|AAA18301.1| 964|Drosophila melanogaster protein ( Dros... 47 3e-05
AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein ... 47 3e-05
AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein ... 47 3e-05
AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein ... 47 3e-05
AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein ... 47 3e-05
X51968-2|CAA36227.1| 1021|Drosophila melanogaster protein ( Dros... 35 0.15
AJ302712-2|CAC16871.1| 1227|Drosophila melanogaster pol protein. 34 0.19
BT029263-1|ABK30900.1| 495|Drosophila melanogaster IP03351p pro... 32 1.0
AE014296-2454|AAF49683.1| 602|Drosophila melanogaster CG3020-PA... 32 1.0
AY574373-1|AAS87366.1| 595|Drosophila melanogaster transcriptio... 31 1.8
AY069805-1|AAL39950.1| 546|Drosophila melanogaster SD04477p pro... 31 1.8
AF238310-1|AAF69496.1| 595|Drosophila melanogaster Fos-related ... 31 1.8
AE014297-4439|AAZ83994.1| 617|Drosophila melanogaster CG33956-P... 31 1.8
AE014297-4438|AAZ83993.1| 546|Drosophila melanogaster CG33956-P... 31 1.8
AE014297-4436|AAZ83992.1| 595|Drosophila melanogaster CG33956-P... 31 1.8
AE014297-4435|AAZ83991.1| 722|Drosophila melanogaster CG33956-P... 31 1.8
U75467-1|AAB18341.1| 724|Drosophila melanogaster Atu protein. 30 4.2
AY075403-1|AAL68232.1| 725|Drosophila melanogaster LD30655p pro... 30 4.2
AE014297-303|AAF51991.1| 725|Drosophila melanogaster CG1433-PA ... 30 4.2
AF221715-1|AAF34661.1| 5554|Drosophila melanogaster split ends l... 29 5.5
AF188205-1|AAF13218.1| 5533|Drosophila melanogaster Spen RNP mot... 29 5.5
AF184612-1|AAF26299.1| 5476|Drosophila melanogaster split ends p... 29 5.5
AE014134-58|AAN10511.1| 5476|Drosophila melanogaster CG18497-PC,... 29 5.5
AE014134-57|AAF51534.2| 5533|Drosophila melanogaster CG18497-PB,... 29 5.5
AE014134-56|AAF51535.2| 5560|Drosophila melanogaster CG18497-PA,... 29 5.5
AY128500-1|AAM75093.1| 513|Drosophila melanogaster RH70372p pro... 29 7.3
AY051612-1|AAK93036.1| 513|Drosophila melanogaster GH25653p pro... 29 7.3
AE014298-2165|AAN09356.1| 426|Drosophila melanogaster CG6340-PD... 29 7.3
AE014298-2162|AAF48464.1| 513|Drosophila melanogaster CG6340-PB... 29 7.3
BT023770-1|AAZ41778.1| 931|Drosophila melanogaster LP23752p pro... 29 9.6
AY195738-1|AAO43730.1| 917|Drosophila melanogaster kekkon5 prec... 29 9.6
AE014298-2840|AAN09488.1| 931|Drosophila melanogaster CG12199-P... 29 9.6
AE014298-2839|AAF48953.2| 931|Drosophila melanogaster CG12199-P... 29 9.6
>AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown protein.
Length = 908
Score = 97.1 bits (231), Expect = 2e-20
Identities = 56/160 (35%), Positives = 81/160 (50%)
Frame = -3
Query: 784 KYLGVTLDRGMTFRPQNKTVRDRPAFILGRLYPMLCSRSKLSLRNKVTLYKTCIRPVMTY 605
KYLGV LDR +TF +R R + + Y +L SRSKLSL NK+T+YK + P Y
Sbjct: 746 KYLGVLLDRRLTFSKHVTDIRTRLRAKVAKHYWLLSSRSKLSLSNKLTIYKQILAPNWKY 805
Query: 604 ASVVFAHAARTHLKSLQVIQSRFCRIAVGAPWFLRNVXXXXXXXXXXXSKYLQSASLRHF 425
++ A +H+K +Q IQ++ R+ G WF+RN + S R+
Sbjct: 806 GCQIWGLACDSHIKRIQAIQNKVARLITGCEWFVRNTTLHRDLKLATVFDEINKHSSRYH 865
Query: 424 EKAARHENPLIVAAGNYIPDPVDRMVNRRRRPKHVITDPP 305
++ RH N L A P R +N RR+P+ +IT P
Sbjct: 866 DRLERHRNRLASALNRSRP---PRRLN-RRQPRDLITRSP 901
>X17551-2|CAA35587.1| 888|Drosophila melanogaster protein (
D.melanogaster white-one mutant DNA with Doc retroposon,
inserted inwhite locuspromoter region. ).
Length = 888
Score = 83.4 bits (197), Expect = 3e-16
Identities = 44/132 (33%), Positives = 69/132 (52%)
Frame = -3
Query: 790 KVKYLGVTLDRGMTFRPQNKTVRDRPAFILGRLYPMLCSRSKLSLRNKVTLYKTCIRPVM 611
+V YLGV LDR +T+R + L+ ++ +RS LSL K LY + ++P+
Sbjct: 735 EVTYLGVHLDRRLTWRKHIEAKSKHLKLKARNLHWLINARSPLSLEFKALLYNSVLKPIW 794
Query: 610 TYASVVFAHAARTHLKSLQVIQSRFCRIAVGAPWFLRNVXXXXXXXXXXXSKYLQSASLR 431
TY S ++ +A+R+++ +Q QSR RI GAPW+LRN + + +
Sbjct: 795 TYGSELWGNASRSNIDIIQRAQSRILRIITGAPWYLRNENIHRDLKIKLVIEVIAEKKTK 854
Query: 430 HFEKAARHENPL 395
+ EK H NPL
Sbjct: 855 YNEKLTTHTNPL 866
>AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p protein.
Length = 888
Score = 83.4 bits (197), Expect = 3e-16
Identities = 44/132 (33%), Positives = 69/132 (52%)
Frame = -3
Query: 790 KVKYLGVTLDRGMTFRPQNKTVRDRPAFILGRLYPMLCSRSKLSLRNKVTLYKTCIRPVM 611
+V YLGV LDR +T+R + L+ ++ +RS LSL K LY + ++P+
Sbjct: 735 EVTYLGVHLDRRLTWRKHIEAKSKHLKLKARNLHWLINARSPLSLEFKALLYNSVLKPIW 794
Query: 610 TYASVVFAHAARTHLKSLQVIQSRFCRIAVGAPWFLRNVXXXXXXXXXXXSKYLQSASLR 431
TY S ++ +A+R+++ +Q QSR RI GAPW+LRN + + +
Sbjct: 795 TYGSELWGNASRSNIDIIQRAQSRILRIITGAPWYLRNENIHRDLKIKLVIEVIAEKKTK 854
Query: 430 HFEKAARHENPL 395
+ EK H NPL
Sbjct: 855 YNEKLTTHTNPL 866
>M22874-2|AAA28675.1| 916|Drosophila melanogaster protein (
D.melanogaster LINEelement J-1, clone J-1. ).
Length = 916
Score = 81.0 bits (191), Expect = 2e-15
Identities = 48/162 (29%), Positives = 80/162 (49%), Gaps = 1/162 (0%)
Frame = -3
Query: 784 KYLGVTLDRGMTFRPQNKTVRDRPAFILGRLYPMLCSRSKLSLRNKVTLYKTCIRPVMTY 605
KYLG+TLDR +TF ++ + R+ ++ R+KLSL KV +YK+ + P + Y
Sbjct: 751 KYLGITLDRKLTFSRHITNIQQAFRTKVARMSWLIAPRNKLSLGCKVNIYKSILAPCLFY 810
Query: 604 ASVVFAHAARTHLKSLQVIQSRFCRIAVGAPWFLRNVXXXXXXXXXXXSKYLQSASLRHF 425
V+ AA++HL ++++Q++ R GAPW++R LQ+ + ++
Sbjct: 811 GLQVYGIAAKSHLNKIRILQAKTLRRISGAPWYMRTRDIERDLKVPKLGDKLQNIAQKYM 870
Query: 424 EKAARHENPLIVAAGNYIPDPVD-RMVNRRRRPKHVITDPPD 302
E+ H N L G D R +RR +H D P+
Sbjct: 871 ERLNVHPNSLARKLGTAAVVNADPRTRVKRRLKRHHPHDLPN 912
>AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p protein.
Length = 718
Score = 81.0 bits (191), Expect = 2e-15
Identities = 48/162 (29%), Positives = 80/162 (49%), Gaps = 1/162 (0%)
Frame = -3
Query: 784 KYLGVTLDRGMTFRPQNKTVRDRPAFILGRLYPMLCSRSKLSLRNKVTLYKTCIRPVMTY 605
KYLG+TLDR +TF ++ + R+ ++ R+KLSL KV +YK+ + P + Y
Sbjct: 553 KYLGITLDRKLTFSRHITNIQQAFRTKVARMSWLIAPRNKLSLGCKVNIYKSILAPCLFY 612
Query: 604 ASVVFAHAARTHLKSLQVIQSRFCRIAVGAPWFLRNVXXXXXXXXXXXSKYLQSASLRHF 425
V+ AA++HL ++++Q++ R GAPW++R LQ+ + ++
Sbjct: 613 GLQVYGIAAKSHLNKIRILQAKTLRRISGAPWYMRTRDIERDLKVPKLGDKLQNIAQKYL 672
Query: 424 EKAARHENPLIVAAGNYIPDPVD-RMVNRRRRPKHVITDPPD 302
E+ H N L G D R +RR +H D P+
Sbjct: 673 ERLNVHPNSLARKLGTAAVVNADPRTRVKRRLKRHHPHDLPN 714
>AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein.
Length = 884
Score = 75.8 bits (178), Expect = 6e-14
Identities = 30/94 (31%), Positives = 58/94 (61%)
Frame = -3
Query: 787 VKYLGVTLDRGMTFRPQNKTVRDRPAFILGRLYPMLCSRSKLSLRNKVTLYKTCIRPVMT 608
++YLG+ D+ +TF+ + I+ LYP++ +SKLS+ NK+ ++KT P++
Sbjct: 770 IRYLGIIFDKKLTFKYHINNTIMKVNKIICTLYPLINRKSKLSISNKIIIFKTIFNPILM 829
Query: 607 YASVVFAHAARTHLKSLQVIQSRFCRIAVGAPWF 506
Y S V+ A+TH+K LQ+ Q++ ++ + P++
Sbjct: 830 YGSPVWGRCAQTHIKKLQICQNKLLKLIMNLPYY 863
>AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse
transcriptase protein.
Length = 832
Score = 75.8 bits (178), Expect = 6e-14
Identities = 30/94 (31%), Positives = 58/94 (61%)
Frame = -3
Query: 787 VKYLGVTLDRGMTFRPQNKTVRDRPAFILGRLYPMLCSRSKLSLRNKVTLYKTCIRPVMT 608
++YLG+ D+ +TF+ + I+ LYP++ +SKLS+ NK+ ++KT P++
Sbjct: 718 IRYLGIIFDKKLTFKYHINNTIMKVNKIICTLYPLINRKSKLSISNKIIIFKTIFNPILM 777
Query: 607 YASVVFAHAARTHLKSLQVIQSRFCRIAVGAPWF 506
Y S V+ A+TH+K LQ+ Q++ ++ + P++
Sbjct: 778 YGSPVWGRCAQTHIKKLQICQNKLLKLIMNLPYY 811
>M17214-2|AAA28508.1| 858|Drosophila melanogaster protein (
D.melanogaster Fw repetitiveelement putative reverse
transcriptase, complete cds,and putative binding protein,
3' end. ).
Length = 858
Score = 70.5 bits (165), Expect = 2e-12
Identities = 34/98 (34%), Positives = 60/98 (61%)
Frame = -3
Query: 790 KVKYLGVTLDRGMTFRPQNKTVRDRPAFILGRLYPMLCSRSKLSLRNKVTLYKTCIRPVM 611
+V YLGV LDR +T+R + + + L+ ++ S S LSL +KV LY + ++P+
Sbjct: 737 EVTYLGVHLDRRLTWRRHIEAKKTQLKLKANNLHWLINSGSPLSLDHKVLLYNSILKPIW 796
Query: 610 TYASVVFAHAARTHLKSLQVIQSRFCRIAVGAPWFLRN 497
TY S ++ +A+ +++ +Q QS+ R GAPW++R+
Sbjct: 797 TYGSQLWGNASNSNIDIIQRAQSKILRTITGAPWYVRS 834
>AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p protein.
Length = 906
Score = 66.9 bits (156), Expect = 3e-11
Identities = 35/132 (26%), Positives = 66/132 (50%)
Frame = -3
Query: 790 KVKYLGVTLDRGMTFRPQNKTVRDRPAFILGRLYPMLCSRSKLSLRNKVTLYKTCIRPVM 611
+ KYLG+TLD+ +TF P K R + +L +L +S ++LR K +Y C+ P+
Sbjct: 750 QAKYLGITLDKRLTFGPHLKATTRRCYQRMQQLRWLLNRKSTMTLRAKRAVYVHCVAPIW 809
Query: 610 TYASVVFAHAARTHLKSLQVIQSRFCRIAVGAPWFLRNVXXXXXXXXXXXSKYLQSASLR 431
Y ++ AA+++ +QV+Q+R R P+++R + + + R
Sbjct: 810 LYGIQIWGIAAKSNYNRIQVLQNRAMRAITDCPYYVRGTTLHRDLNLHTVEEQISRHTSR 869
Query: 430 HFEKAARHENPL 395
+ ++ RH + L
Sbjct: 870 YSDRLRRHHSIL 881
>AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 57.2 bits (132), Expect = 2e-08
Identities = 37/153 (24%), Positives = 67/153 (43%), Gaps = 3/153 (1%)
Frame = -3
Query: 790 KVKYLGVTLDRGMTFRPQNKTVRDRPAFILGRLYPMLCSRSKLSLRNKVTLYKTCIRPVM 611
K +YLG+ LDR +TF ++ + +L ++ S L K+ L+K + P+
Sbjct: 807 KQRYLGLMLDRRLTFCAHMTLLKGKTIAAYKKLEWLIGKNSHLPKNAKILLWKQIVSPIW 866
Query: 610 TYASVVFAH-AARTHLKSLQVIQSRFCRIAVGAPWFLRNVXXXXXXXXXXXSKYLQSASL 434
YA ++ + T K +Q +++++ R + A + R + AS
Sbjct: 867 HYAIAIWGSLVSDTQAKKIQTMENKYIRRIINASRYTRQADIRTKYNIKSFDEIFDKASQ 926
Query: 433 RHFEKAARHENPLI--VAAGNYIPDPVDRMVNR 341
R+ HENPLI + Y P+ ++ NR
Sbjct: 927 RYANSLTDHENPLIYDLLINAYKPNRLELSKNR 959
>AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 57.2 bits (132), Expect = 2e-08
Identities = 37/153 (24%), Positives = 67/153 (43%), Gaps = 3/153 (1%)
Frame = -3
Query: 790 KVKYLGVTLDRGMTFRPQNKTVRDRPAFILGRLYPMLCSRSKLSLRNKVTLYKTCIRPVM 611
K +YLG+ LDR +TF ++ + +L ++ S L K+ L+K + P+
Sbjct: 807 KQRYLGLMLDRRLTFCAHMTLLKGKTIAAYKKLEWLIGKNSHLPKNAKILLWKQIVSPIW 866
Query: 610 TYASVVFAH-AARTHLKSLQVIQSRFCRIAVGAPWFLRNVXXXXXXXXXXXSKYLQSASL 434
YA ++ + T K +Q +++++ R + A + R + AS
Sbjct: 867 HYAIAIWGSLVSDTQAKKIQTMENKYIRRIINASRYTRQADIRTKYNIKSFDEIFDKASQ 926
Query: 433 RHFEKAARHENPLI--VAAGNYIPDPVDRMVNR 341
R+ HENPLI + Y P+ ++ NR
Sbjct: 927 RYANSLTDHENPLIYDLLINAYKPNRLELSKNR 959
>AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 57.2 bits (132), Expect = 2e-08
Identities = 37/153 (24%), Positives = 67/153 (43%), Gaps = 3/153 (1%)
Frame = -3
Query: 790 KVKYLGVTLDRGMTFRPQNKTVRDRPAFILGRLYPMLCSRSKLSLRNKVTLYKTCIRPVM 611
K +YLG+ LDR +TF ++ + +L ++ S L K+ L+K + P+
Sbjct: 807 KQRYLGLMLDRRLTFCAHMTLLKGKTIAAYKKLEWLIGKNSHLPKNAKILLWKQIVSPIW 866
Query: 610 TYASVVFAH-AARTHLKSLQVIQSRFCRIAVGAPWFLRNVXXXXXXXXXXXSKYLQSASL 434
YA ++ + T K +Q +++++ R + A + R + AS
Sbjct: 867 HYAIAIWGSLVSDTQAKKIQTMENKYIRRIINASRYTRQADIRTKYNIKSFDEIFDKASQ 926
Query: 433 RHFEKAARHENPLI--VAAGNYIPDPVDRMVNR 341
R+ HENPLI + Y P+ ++ NR
Sbjct: 927 RYANSLTDHENPLIYDLLINAYKPNRLELSKNR 959
>AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein
protein.
Length = 656
Score = 56.8 bits (131), Expect = 3e-08
Identities = 37/153 (24%), Positives = 67/153 (43%), Gaps = 3/153 (1%)
Frame = -3
Query: 790 KVKYLGVTLDRGMTFRPQNKTVRDRPAFILGRLYPMLCSRSKLSLRNKVTLYKTCIRPVM 611
K +YLG+ LDR +TF ++ + +L ++ S L K+ L+K + P+
Sbjct: 360 KQRYLGLMLDRRLTFCAHMTLLKGKTIAAYKKLEWLIGKNSHLPKNAKILLWKQIVSPIW 419
Query: 610 TYASVVFAH-AARTHLKSLQVIQSRFCRIAVGAPWFLRNVXXXXXXXXXXXSKYLQSASL 434
YA ++ + T K +Q +++++ R + A + R + AS
Sbjct: 420 HYAIAIWGSLVSDTQAKKIQTMENKYIRRIINASRYTRQADIRTKYNIKSFDETFDKASQ 479
Query: 433 RHFEKAARHENPLI--VAAGNYIPDPVDRMVNR 341
R+ HENPLI + Y P+ ++ NR
Sbjct: 480 RYANSLTDHENPLIYDLLINAYKPNRLELSKNR 512
>AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein
protein.
Length = 1092
Score = 49.6 bits (113), Expect = 5e-06
Identities = 38/153 (24%), Positives = 66/153 (43%), Gaps = 3/153 (1%)
Frame = -3
Query: 790 KVKYLGVTLDRGMTFRPQNKTVRDRPAFILGRLYPMLCSRSKLSLRNKVTLYKTCIRPVM 611
K YLGVTLD +T + + + +L +L RSKL + K+ + K+ + P+
Sbjct: 808 KQSYLGVTLDSKLTLSSHVTKLLGKYSTAYRKLTWILNGRSKLPTKTKILILKSVLSPIW 867
Query: 610 TYASVVFAH-AARTHLKSLQVIQSRFCRIAVGAPWFLRNVXXXXXXXXXXXSKYLQSASL 434
YA + ++ +QV ++R R A + RN ++ Q A
Sbjct: 868 QYAIAAWGPLVTDAQIRRVQVEENRKIRDICRAGRYTRNQTIRDLFGVKTVEEFYQQAMH 927
Query: 433 RHFEKAARHENPLI--VAAGNYIPDPVDRMVNR 341
R E H N + + + +YIP+ ++R R
Sbjct: 928 RFSETIKSHPNIAVRRILSRHYIPNRLERSRQR 960
>U02279-1|AAA18301.1| 964|Drosophila melanogaster protein (
Drosophila melanogastertelomere-associated transposons
TART, TART-A and HeT-A,and TART-A ORF2 gene, partial cds.
).
Length = 964
Score = 47.2 bits (107), Expect = 3e-05
Identities = 37/153 (24%), Positives = 64/153 (41%), Gaps = 3/153 (1%)
Frame = -3
Query: 790 KVKYLGVTLDRGMTFRPQNKTVRDRPAFILGRLYPMLCSRSKLSLRNKVTLYKTCIRPVM 611
K YLGV LD +T P V + ++ +L RSKL K+ + K+ + P+
Sbjct: 680 KQSYLGVILDSKLTLSPHVTKVVGKYLTAYRKMSWILNERSKLPTNTKMLILKSVLSPIW 739
Query: 610 TYASVVFAH-AARTHLKSLQVIQSRFCRIAVGAPWFLRNVXXXXXXXXXXXSKYLQSASL 434
YA + ++ +QV ++R R A + +N ++ Q A
Sbjct: 740 QYAIAAWGPLVTDAQIRRIQVEENRKMRDICRAGRYTKNQTIRDRYCVKTVEEFYQQAVH 799
Query: 433 RHFEKAARHENPLI--VAAGNYIPDPVDRMVNR 341
R E H N + + + +YIP+ ++R R
Sbjct: 800 RFSETTKSHPNVAVRRIFSRHYIPNRLERSRQR 832
>AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 47.2 bits (107), Expect = 3e-05
Identities = 37/153 (24%), Positives = 64/153 (41%), Gaps = 3/153 (1%)
Frame = -3
Query: 790 KVKYLGVTLDRGMTFRPQNKTVRDRPAFILGRLYPMLCSRSKLSLRNKVTLYKTCIRPVM 611
K YLGV LD +T P V + ++ +L RSKL K+ + K+ + P+
Sbjct: 796 KQSYLGVILDSKLTLSPHVTKVVGKYLTAYRKMSWILNERSKLPTNTKMLILKSVLSPIW 855
Query: 610 TYASVVFAH-AARTHLKSLQVIQSRFCRIAVGAPWFLRNVXXXXXXXXXXXSKYLQSASL 434
YA + ++ +QV ++R R A + +N ++ Q A
Sbjct: 856 QYAIAAWGPLVTDAQIRRIQVEENRKMRDICRAGRYTKNQTIRDRYCVKTVEEFYQQAVH 915
Query: 433 RHFEKAARHENPLI--VAAGNYIPDPVDRMVNR 341
R E H N + + + +YIP+ ++R R
Sbjct: 916 RFSETTKSHPNVAVRRIFSRHYIPNRLERSRQR 948
>AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 47.2 bits (107), Expect = 3e-05
Identities = 37/153 (24%), Positives = 64/153 (41%), Gaps = 3/153 (1%)
Frame = -3
Query: 790 KVKYLGVTLDRGMTFRPQNKTVRDRPAFILGRLYPMLCSRSKLSLRNKVTLYKTCIRPVM 611
K YLGV LD +T P V + ++ +L RSKL K+ + K+ + P+
Sbjct: 796 KQSYLGVILDSKLTLSPHVTKVVGKYLTAYRKMSWILNERSKLPTNTKMLILKSVLSPIW 855
Query: 610 TYASVVFAH-AARTHLKSLQVIQSRFCRIAVGAPWFLRNVXXXXXXXXXXXSKYLQSASL 434
YA + ++ +QV ++R R A + +N ++ Q A
Sbjct: 856 QYAIAAWGPLVTDAQIRRIQVEENRKMRDICRAGRYTKNQTIRDRYCVKTVEEFYQQAVH 915
Query: 433 RHFEKAARHENPLI--VAAGNYIPDPVDRMVNR 341
R E H N + + + +YIP+ ++R R
Sbjct: 916 RFSETTKSHPNVAVRRIFSRHYIPNRLERSRQR 948
>AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein
protein.
Length = 1042
Score = 47.2 bits (107), Expect = 3e-05
Identities = 37/153 (24%), Positives = 64/153 (41%), Gaps = 3/153 (1%)
Frame = -3
Query: 790 KVKYLGVTLDRGMTFRPQNKTVRDRPAFILGRLYPMLCSRSKLSLRNKVTLYKTCIRPVM 611
K YLGV LD +T P V + ++ +L RSKL K+ + K+ + P+
Sbjct: 758 KQSYLGVILDSKLTLSPHVTKVVGKYLTAYRKMSWILNERSKLPTNTKMLILKSVLSPIW 817
Query: 610 TYASVVFAH-AARTHLKSLQVIQSRFCRIAVGAPWFLRNVXXXXXXXXXXXSKYLQSASL 434
YA + ++ +QV ++R R A + +N ++ Q A
Sbjct: 818 QYAIAAWGPLVTDAQIRRIQVEENRKMRDICRAGRYTKNQTIRDRYCVKTVEEFYQQAVH 877
Query: 433 RHFEKAARHENPLI--VAAGNYIPDPVDRMVNR 341
R E H N + + + +YIP+ ++R R
Sbjct: 878 RFSETTKSHPNVAVRRIFSRHYIPNRLERSRQR 910
>AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 47.2 bits (107), Expect = 3e-05
Identities = 37/153 (24%), Positives = 64/153 (41%), Gaps = 3/153 (1%)
Frame = -3
Query: 790 KVKYLGVTLDRGMTFRPQNKTVRDRPAFILGRLYPMLCSRSKLSLRNKVTLYKTCIRPVM 611
K YLGV LD +T P V + ++ +L RSKL K+ + K+ + P+
Sbjct: 796 KQSYLGVILDSKLTLSPHVTKVVGKYLTAYRKMSWILNERSKLPTNTKMLILKSVLSPIW 855
Query: 610 TYASVVFAH-AARTHLKSLQVIQSRFCRIAVGAPWFLRNVXXXXXXXXXXXSKYLQSASL 434
YA + ++ +QV ++R R A + +N ++ Q A
Sbjct: 856 QYAIAAWGPLVTDAQIRRIQVEENRKMRDICRAGRYTKNQTIRDRYCVKTVEEFYQQAVH 915
Query: 433 RHFEKAARHENPLI--VAAGNYIPDPVDRMVNR 341
R E H N + + + +YIP+ ++R R
Sbjct: 916 RFSETTKSHPNVAVRRIFSRHYIPNRLERSRQR 948
>X51968-2|CAA36227.1| 1021|Drosophila melanogaster protein (
Drosophila melanogasterDNA for type I retrotransposable
element R1Dm. ).
Length = 1021
Score = 34.7 bits (76), Expect = 0.15
Identities = 19/69 (27%), Positives = 35/69 (50%)
Frame = -3
Query: 784 KYLGVTLDRGMTFRPQNKTVRDRPAFILGRLYPMLCSRSKLSLRNKVTLYKTCIRPVMTY 605
+YLG+T+ GM F ++R R ++G L +L + S R + T+Y + P + +
Sbjct: 735 RYLGITVSEGMKFLTHIASLRQRMTGVVGALARVLRADWGFSPRARRTIYDGLMAPCVLF 794
Query: 604 ASVVFAHAA 578
+ V+ A
Sbjct: 795 GAPVWYDTA 803
>AJ302712-2|CAC16871.1| 1227|Drosophila melanogaster pol protein.
Length = 1227
Score = 34.3 bits (75), Expect = 0.19
Identities = 21/91 (23%), Positives = 42/91 (46%)
Frame = -3
Query: 787 VKYLGVTLDRGMTFRPQNKTVRDRPAFILGRLYPMLCSRSKLSLRNKVTLYKTCIRPVMT 608
+K LG+T D + F+ +T+R + + + S + ++ + + + + +
Sbjct: 746 LKILGITFDPKLLFKQHCQTLRKQLETRFNIIKFLSSKYSYIHIKTLIDITRALMLSKID 805
Query: 607 YASVVFAHAARTHLKSLQVIQSRFCRIAVGA 515
Y +F A++HLK LQV R A+ A
Sbjct: 806 YGLPIFGWCAKSHLKKLQVPYHGAVRRAIHA 836
>BT029263-1|ABK30900.1| 495|Drosophila melanogaster IP03351p
protein.
Length = 495
Score = 31.9 bits (69), Expect = 1.0
Identities = 20/52 (38%), Positives = 27/52 (51%), Gaps = 4/52 (7%)
Frame = -2
Query: 401 PSHRSRWKLHTRPSRPNGKPSTSPKARHYG----SS*SINGAFRHHKHRSPS 258
PS S+ + + PSR +G +SP+ R +G SS F HH RSPS
Sbjct: 77 PSISSQSSVDSAPSRHSGHRGSSPQIRTFGPDGRSSLPSEPGFPHHLARSPS 128
>AE014296-2454|AAF49683.1| 602|Drosophila melanogaster CG3020-PA
protein.
Length = 602
Score = 31.9 bits (69), Expect = 1.0
Identities = 20/52 (38%), Positives = 27/52 (51%), Gaps = 4/52 (7%)
Frame = -2
Query: 401 PSHRSRWKLHTRPSRPNGKPSTSPKARHYG----SS*SINGAFRHHKHRSPS 258
PS S+ + + PSR +G +SP+ R +G SS F HH RSPS
Sbjct: 184 PSISSQSSVDSAPSRHSGHRGSSPQIRTFGPDGRSSLPSEPGFPHHLARSPS 235
>AY574373-1|AAS87366.1| 595|Drosophila melanogaster transcription
factor kay-beta protein.
Length = 595
Score = 31.1 bits (67), Expect = 1.8
Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Frame = -2
Query: 296 NGAFRHHKHRSPSSSNPSLATKGSTSELTHR-HSPLSFSP 180
+GA HH H S SSN ++ +T T R +SPL P
Sbjct: 355 SGASSHHNHNSNDSSNGTITGMDATLNSTGRSNSPLDLKP 394
>AY069805-1|AAL39950.1| 546|Drosophila melanogaster SD04477p
protein.
Length = 546
Score = 31.1 bits (67), Expect = 1.8
Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Frame = -2
Query: 296 NGAFRHHKHRSPSSSNPSLATKGSTSELTHR-HSPLSFSP 180
+GA HH H S SSN ++ +T T R +SPL P
Sbjct: 306 SGASSHHNHNSNDSSNGTITGMDATLNSTGRSNSPLDLKP 345
>AF238310-1|AAF69496.1| 595|Drosophila melanogaster Fos-related
antigen protein.
Length = 595
Score = 31.1 bits (67), Expect = 1.8
Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Frame = -2
Query: 296 NGAFRHHKHRSPSSSNPSLATKGSTSELTHR-HSPLSFSP 180
+GA HH H S SSN ++ +T T R +SPL P
Sbjct: 355 SGASSHHNHNSNDSSNGTITGMDATLNSTGRSNSPLDLKP 394
>AE014297-4439|AAZ83994.1| 617|Drosophila melanogaster CG33956-PE,
isoform E protein.
Length = 617
Score = 31.1 bits (67), Expect = 1.8
Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Frame = -2
Query: 296 NGAFRHHKHRSPSSSNPSLATKGSTSELTHR-HSPLSFSP 180
+GA HH H S SSN ++ +T T R +SPL P
Sbjct: 377 SGASSHHNHNSNDSSNGTITGMDATLNSTGRSNSPLDLKP 416
>AE014297-4438|AAZ83993.1| 546|Drosophila melanogaster CG33956-PB,
isoform B protein.
Length = 546
Score = 31.1 bits (67), Expect = 1.8
Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Frame = -2
Query: 296 NGAFRHHKHRSPSSSNPSLATKGSTSELTHR-HSPLSFSP 180
+GA HH H S SSN ++ +T T R +SPL P
Sbjct: 306 SGASSHHNHNSNDSSNGTITGMDATLNSTGRSNSPLDLKP 345
>AE014297-4436|AAZ83992.1| 595|Drosophila melanogaster CG33956-PA,
isoform A protein.
Length = 595
Score = 31.1 bits (67), Expect = 1.8
Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Frame = -2
Query: 296 NGAFRHHKHRSPSSSNPSLATKGSTSELTHR-HSPLSFSP 180
+GA HH H S SSN ++ +T T R +SPL P
Sbjct: 355 SGASSHHNHNSNDSSNGTITGMDATLNSTGRSNSPLDLKP 394
>AE014297-4435|AAZ83991.1| 722|Drosophila melanogaster CG33956-PD,
isoform D protein.
Length = 722
Score = 31.1 bits (67), Expect = 1.8
Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Frame = -2
Query: 296 NGAFRHHKHRSPSSSNPSLATKGSTSELTHR-HSPLSFSP 180
+GA HH H S SSN ++ +T T R +SPL P
Sbjct: 482 SGASSHHNHNSNDSSNGTITGMDATLNSTGRSNSPLDLKP 521
>U75467-1|AAB18341.1| 724|Drosophila melanogaster Atu protein.
Length = 724
Score = 29.9 bits (64), Expect = 4.2
Identities = 23/77 (29%), Positives = 33/77 (42%), Gaps = 2/77 (2%)
Frame = -2
Query: 422 EGGTT*EP-SHRSRWKLHTRPSRPNGKPSTSPKARHYGSS*SINGAFRHHKHRSPSSSNP 246
+ GT P SHRS + P + S SP++R GS+ S H + + S
Sbjct: 100 KSGTPESPQSHRSGSLQSRKSGSPQSRRSGSPQSRKSGSTHSRRSGSAHSRRSGSARSRK 159
Query: 245 SLATKGSTSELTHR-HS 198
S + + SE R HS
Sbjct: 160 SGSAQSDRSESRSRSHS 176
>AY075403-1|AAL68232.1| 725|Drosophila melanogaster LD30655p
protein.
Length = 725
Score = 29.9 bits (64), Expect = 4.2
Identities = 23/77 (29%), Positives = 33/77 (42%), Gaps = 2/77 (2%)
Frame = -2
Query: 422 EGGTT*EP-SHRSRWKLHTRPSRPNGKPSTSPKARHYGSS*SINGAFRHHKHRSPSSSNP 246
+ GT P SHRS + P + S SP++R GS+ S H + + S
Sbjct: 101 KSGTPESPQSHRSGSLQSRKSGSPQSRRSGSPQSRKSGSTHSRRSGSAHSRRSGSARSRK 160
Query: 245 SLATKGSTSELTHR-HS 198
S + + SE R HS
Sbjct: 161 SGSAQSDRSESRSRSHS 177
>AE014297-303|AAF51991.1| 725|Drosophila melanogaster CG1433-PA
protein.
Length = 725
Score = 29.9 bits (64), Expect = 4.2
Identities = 23/77 (29%), Positives = 33/77 (42%), Gaps = 2/77 (2%)
Frame = -2
Query: 422 EGGTT*EP-SHRSRWKLHTRPSRPNGKPSTSPKARHYGSS*SINGAFRHHKHRSPSSSNP 246
+ GT P SHRS + P + S SP++R GS+ S H + + S
Sbjct: 101 KSGTPESPQSHRSGSLQSRKSGSPQSRRSGSPQSRKSGSTHSRRSGSAHSRRSGSARSRK 160
Query: 245 SLATKGSTSELTHR-HS 198
S + + SE R HS
Sbjct: 161 SGSAQSDRSESRSRSHS 177
>AF221715-1|AAF34661.1| 5554|Drosophila melanogaster split ends long
isoform protein.
Length = 5554
Score = 29.5 bits (63), Expect = 5.5
Identities = 17/52 (32%), Positives = 26/52 (50%)
Frame = -2
Query: 353 NGKPSTSPKARHYGSS*SINGAFRHHKHRSPSSSNPSLATKGSTSELTHRHS 198
NG P+ + RH S + R H RSPSS + S ++ S+ +H H+
Sbjct: 417 NGVPTHPIRTRHNLHGRSTTSSSRSHS-RSPSSYSSSHSSSSSSHSSSHSHA 467
>AF188205-1|AAF13218.1| 5533|Drosophila melanogaster Spen RNP motif
protein long isoformprotein.
Length = 5533
Score = 29.5 bits (63), Expect = 5.5
Identities = 17/52 (32%), Positives = 26/52 (50%)
Frame = -2
Query: 353 NGKPSTSPKARHYGSS*SINGAFRHHKHRSPSSSNPSLATKGSTSELTHRHS 198
NG P+ + RH S + R H RSPSS + S ++ S+ +H H+
Sbjct: 423 NGVPTHPIRTRHNLHGRSTTSSSRSHS-RSPSSYSSSHSSSSSSHSSSHSHA 473
>AF184612-1|AAF26299.1| 5476|Drosophila melanogaster split ends
protein.
Length = 5476
Score = 29.5 bits (63), Expect = 5.5
Identities = 17/52 (32%), Positives = 26/52 (50%)
Frame = -2
Query: 353 NGKPSTSPKARHYGSS*SINGAFRHHKHRSPSSSNPSLATKGSTSELTHRHS 198
NG P+ + RH S + R H RSPSS + S ++ S+ +H H+
Sbjct: 366 NGVPTHPIRTRHNLHGRSTTSSSRSHS-RSPSSYSSSHSSSSSSHSSSHSHA 416
>AE014134-58|AAN10511.1| 5476|Drosophila melanogaster CG18497-PC,
isoform C protein.
Length = 5476
Score = 29.5 bits (63), Expect = 5.5
Identities = 17/52 (32%), Positives = 26/52 (50%)
Frame = -2
Query: 353 NGKPSTSPKARHYGSS*SINGAFRHHKHRSPSSSNPSLATKGSTSELTHRHS 198
NG P+ + RH S + R H RSPSS + S ++ S+ +H H+
Sbjct: 366 NGVPTHPIRTRHNLHGRSTTSSSRSHS-RSPSSYSSSHSSSSSSHSSSHSHA 416
>AE014134-57|AAF51534.2| 5533|Drosophila melanogaster CG18497-PB,
isoform B protein.
Length = 5533
Score = 29.5 bits (63), Expect = 5.5
Identities = 17/52 (32%), Positives = 26/52 (50%)
Frame = -2
Query: 353 NGKPSTSPKARHYGSS*SINGAFRHHKHRSPSSSNPSLATKGSTSELTHRHS 198
NG P+ + RH S + R H RSPSS + S ++ S+ +H H+
Sbjct: 423 NGVPTHPIRTRHNLHGRSTTSSSRSHS-RSPSSYSSSHSSSSSSHSSSHSHA 473
>AE014134-56|AAF51535.2| 5560|Drosophila melanogaster CG18497-PA,
isoform A protein.
Length = 5560
Score = 29.5 bits (63), Expect = 5.5
Identities = 17/52 (32%), Positives = 26/52 (50%)
Frame = -2
Query: 353 NGKPSTSPKARHYGSS*SINGAFRHHKHRSPSSSNPSLATKGSTSELTHRHS 198
NG P+ + RH S + R H RSPSS + S ++ S+ +H H+
Sbjct: 423 NGVPTHPIRTRHNLHGRSTTSSSRSHS-RSPSSYSSSHSSSSSSHSSSHSHA 473
>AY128500-1|AAM75093.1| 513|Drosophila melanogaster RH70372p
protein.
Length = 513
Score = 29.1 bits (62), Expect = 7.3
Identities = 19/64 (29%), Positives = 28/64 (43%)
Frame = -2
Query: 398 SHRSRWKLHTRPSRPNGKPSTSPKARHYGSS*SINGAFRHHKHRSPSSSNPSLATKGSTS 219
SHR R + R R + + R SS +G RHH H + SSS + A ++
Sbjct: 157 SHRERERDRDR-ERERDRDKDRDRRRSEKSSRHHSGKERHHHHHNNSSSAAAAAVSAASV 215
Query: 218 ELTH 207
+H
Sbjct: 216 RRSH 219
>AY051612-1|AAK93036.1| 513|Drosophila melanogaster GH25653p
protein.
Length = 513
Score = 29.1 bits (62), Expect = 7.3
Identities = 19/64 (29%), Positives = 28/64 (43%)
Frame = -2
Query: 398 SHRSRWKLHTRPSRPNGKPSTSPKARHYGSS*SINGAFRHHKHRSPSSSNPSLATKGSTS 219
SHR R + R R + + R SS +G RHH H + SSS + A ++
Sbjct: 157 SHRERERDRDR-ERERDRDKDRDRRRSEKSSRHHSGKERHHHHHNNSSSAAAAAVSAASV 215
Query: 218 ELTH 207
+H
Sbjct: 216 RRSH 219
>AE014298-2165|AAN09356.1| 426|Drosophila melanogaster CG6340-PD,
isoform D protein.
Length = 426
Score = 29.1 bits (62), Expect = 7.3
Identities = 19/64 (29%), Positives = 28/64 (43%)
Frame = -2
Query: 398 SHRSRWKLHTRPSRPNGKPSTSPKARHYGSS*SINGAFRHHKHRSPSSSNPSLATKGSTS 219
SHR R + R R + + R SS +G RHH H + SSS + A ++
Sbjct: 70 SHRERERDRDR-ERERDRDKDRDRRRSEKSSRHHSGKERHHHHHNNSSSAAAAAVSAASV 128
Query: 218 ELTH 207
+H
Sbjct: 129 RRSH 132
>AE014298-2162|AAF48464.1| 513|Drosophila melanogaster CG6340-PB,
isoform B protein.
Length = 513
Score = 29.1 bits (62), Expect = 7.3
Identities = 19/64 (29%), Positives = 28/64 (43%)
Frame = -2
Query: 398 SHRSRWKLHTRPSRPNGKPSTSPKARHYGSS*SINGAFRHHKHRSPSSSNPSLATKGSTS 219
SHR R + R R + + R SS +G RHH H + SSS + A ++
Sbjct: 157 SHRERERDRDR-ERERDRDKDRDRRRSEKSSRHHSGKERHHHHHNNSSSAAAAAVSAASV 215
Query: 218 ELTH 207
+H
Sbjct: 216 RRSH 219
>BT023770-1|AAZ41778.1| 931|Drosophila melanogaster LP23752p
protein.
Length = 931
Score = 28.7 bits (61), Expect = 9.6
Identities = 18/52 (34%), Positives = 27/52 (51%)
Frame = -2
Query: 368 RPSRPNGKPSTSPKARHYGSS*SINGAFRHHKHRSPSSSNPSLATKGSTSEL 213
+P P+ PSTS A H G+ + + +SP+S NPS +T+EL
Sbjct: 703 KPRAPSWAPSTSGAAGH--------GSIQLSEFQSPTSPNPSETGTATTAEL 746
>AY195738-1|AAO43730.1| 917|Drosophila melanogaster kekkon5
precursor protein.
Length = 917
Score = 28.7 bits (61), Expect = 9.6
Identities = 18/52 (34%), Positives = 27/52 (51%)
Frame = -2
Query: 368 RPSRPNGKPSTSPKARHYGSS*SINGAFRHHKHRSPSSSNPSLATKGSTSEL 213
+P P+ PSTS A H G+ + + +SP+S NPS +T+EL
Sbjct: 689 KPRAPSWAPSTSGAAGH--------GSIQLSEFQSPTSPNPSETGTATTAEL 732
>AE014298-2840|AAN09488.1| 931|Drosophila melanogaster CG12199-PB,
isoform B protein.
Length = 931
Score = 28.7 bits (61), Expect = 9.6
Identities = 18/52 (34%), Positives = 27/52 (51%)
Frame = -2
Query: 368 RPSRPNGKPSTSPKARHYGSS*SINGAFRHHKHRSPSSSNPSLATKGSTSEL 213
+P P+ PSTS A H G+ + + +SP+S NPS +T+EL
Sbjct: 703 KPRAPSWAPSTSGAAGH--------GSIQLSEFQSPTSPNPSETGTATTAEL 746
>AE014298-2839|AAF48953.2| 931|Drosophila melanogaster CG12199-PA,
isoform A protein.
Length = 931
Score = 28.7 bits (61), Expect = 9.6
Identities = 18/52 (34%), Positives = 27/52 (51%)
Frame = -2
Query: 368 RPSRPNGKPSTSPKARHYGSS*SINGAFRHHKHRSPSSSNPSLATKGSTSEL 213
+P P+ PSTS A H G+ + + +SP+S NPS +T+EL
Sbjct: 703 KPRAPSWAPSTSGAAGH--------GSIQLSEFQSPTSPNPSETGTATTAEL 746
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,729,267
Number of Sequences: 53049
Number of extensions: 765405
Number of successful extensions: 2234
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 1993
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2196
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3675273108
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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