Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP10_T7_N01
(788 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U88174-3|ABP57824.1| 1058|Caenorhabditis elegans Tomosyn synapti... 61 8e-10
U88174-2|AAP68903.1| 1211|Caenorhabditis elegans Tomosyn synapti... 61 8e-10
U88174-1|ABP57823.1| 1124|Caenorhabditis elegans Tomosyn synapti... 61 8e-10
AY997306-1|AAY44303.1| 1133|Caenorhabditis elegans TOM-1 isoform... 61 8e-10
AY997305-1|AAY44302.1| 1128|Caenorhabditis elegans TOM-1 isoform... 61 8e-10
AY912103-1|AAX89146.1| 1058|Caenorhabditis elegans tomosyn protein. 61 8e-10
AY912102-1|AAX89145.1| 1124|Caenorhabditis elegans tomosyn isofo... 61 8e-10
U51993-3|AAB36853.2| 958|Caenorhabditis elegans Hypothetical pr... 58 7e-09
Z83102-5|CAB05468.1| 179|Caenorhabditis elegans Hypothetical pr... 30 2.2
AL021487-10|CAA16357.2| 1592|Caenorhabditis elegans Hypothetical... 29 5.0
Z98866-23|CAB11557.2| 399|Caenorhabditis elegans Hypothetical p... 28 6.6
Z66567-1|CAA91491.1| 887|Caenorhabditis elegans Hypothetical pr... 28 8.8
AF101309-3|AAN60514.1| 760|Caenorhabditis elegans Hypothetical ... 28 8.8
AF101309-2|AAL32230.1| 1601|Caenorhabditis elegans Hypothetical ... 28 8.8
AF101309-1|AAL32229.1| 1680|Caenorhabditis elegans Hypothetical ... 28 8.8
>U88174-3|ABP57824.1| 1058|Caenorhabditis elegans Tomosyn synaptic
protein protein1, isoform d protein.
Length = 1058
Score = 61.3 bits (142), Expect = 8e-10
Identities = 26/94 (27%), Positives = 49/94 (52%)
Frame = -1
Query: 329 PYLVSVHASAVTTAQLADGVAPAVYDNIVAAGQQQTENQYSESPWPISGGVVETAELTDR 150
P+ +++H S VT + + G +Q ++S WP++GG+ +
Sbjct: 335 PHAMNIHESPVTCMAYYSDCPLDLIGALTLVGTKQRNKEFSARSWPVTGGLGRECATGHQ 394
Query: 149 QVLLTGHEDGSVRFWDVTGVAMTPLYKYTTAQLF 48
++++TGH+DGS++FW TG + LYK ++ F
Sbjct: 395 ELVVTGHKDGSLKFWQETGEHLQILYKLKSSSHF 428
Score = 33.9 bits (74), Expect = 0.13
Identities = 16/50 (32%), Positives = 27/50 (54%)
Frame = -1
Query: 695 TPYGPYPCKAITKILNRTSVDGEDITIFAGGMPRASYSDRYTVTVQQGEK 546
TP+G PC+ I ++ + + E I +F+GGMP +T+ +G K
Sbjct: 230 TPHGSGPCRPIQQVEWKHMSETESIIMFSGGMPTDDGLPMPALTILKGGK 279
>U88174-2|AAP68903.1| 1211|Caenorhabditis elegans Tomosyn synaptic
protein protein1, isoform c protein.
Length = 1211
Score = 61.3 bits (142), Expect = 8e-10
Identities = 26/94 (27%), Positives = 49/94 (52%)
Frame = -1
Query: 329 PYLVSVHASAVTTAQLADGVAPAVYDNIVAAGQQQTENQYSESPWPISGGVVETAELTDR 150
P+ +++H S VT + + G +Q ++S WP++GG+ +
Sbjct: 335 PHAMNIHESPVTCMAYYSDCPLDLIGALTLVGTKQRNKEFSARSWPVTGGLGRECATGHQ 394
Query: 149 QVLLTGHEDGSVRFWDVTGVAMTPLYKYTTAQLF 48
++++TGH+DGS++FW TG + LYK ++ F
Sbjct: 395 ELVVTGHKDGSLKFWQETGEHLQILYKLKSSSHF 428
Score = 33.9 bits (74), Expect = 0.13
Identities = 16/50 (32%), Positives = 27/50 (54%)
Frame = -1
Query: 695 TPYGPYPCKAITKILNRTSVDGEDITIFAGGMPRASYSDRYTVTVQQGEK 546
TP+G PC+ I ++ + + E I +F+GGMP +T+ +G K
Sbjct: 230 TPHGSGPCRPIQQVEWKHMSETESIIMFSGGMPTDDGLPMPALTILKGGK 279
>U88174-1|ABP57823.1| 1124|Caenorhabditis elegans Tomosyn synaptic
protein protein1, isoform a protein.
Length = 1124
Score = 61.3 bits (142), Expect = 8e-10
Identities = 26/94 (27%), Positives = 49/94 (52%)
Frame = -1
Query: 329 PYLVSVHASAVTTAQLADGVAPAVYDNIVAAGQQQTENQYSESPWPISGGVVETAELTDR 150
P+ +++H S VT + + G +Q ++S WP++GG+ +
Sbjct: 370 PHAMNIHESPVTCMAYYSDCPLDLIGALTLVGTKQRNKEFSARSWPVTGGLGRECATGHQ 429
Query: 149 QVLLTGHEDGSVRFWDVTGVAMTPLYKYTTAQLF 48
++++TGH+DGS++FW TG + LYK ++ F
Sbjct: 430 ELVVTGHKDGSLKFWQETGEHLQILYKLKSSSHF 463
Score = 33.9 bits (74), Expect = 0.13
Identities = 16/50 (32%), Positives = 27/50 (54%)
Frame = -1
Query: 695 TPYGPYPCKAITKILNRTSVDGEDITIFAGGMPRASYSDRYTVTVQQGEK 546
TP+G PC+ I ++ + + E I +F+GGMP +T+ +G K
Sbjct: 265 TPHGSGPCRPIQQVEWKHMSETESIIMFSGGMPTDDGLPMPALTILKGGK 314
>AY997306-1|AAY44303.1| 1133|Caenorhabditis elegans TOM-1 isoform E
protein.
Length = 1133
Score = 61.3 bits (142), Expect = 8e-10
Identities = 26/94 (27%), Positives = 49/94 (52%)
Frame = -1
Query: 329 PYLVSVHASAVTTAQLADGVAPAVYDNIVAAGQQQTENQYSESPWPISGGVVETAELTDR 150
P+ +++H S VT + + G +Q ++S WP++GG+ +
Sbjct: 370 PHAMNIHESPVTCMAYYSDCPLDLIGALTLVGTKQRNKEFSARSWPVTGGLGRECATGHQ 429
Query: 149 QVLLTGHEDGSVRFWDVTGVAMTPLYKYTTAQLF 48
++++TGH+DGS++FW TG + LYK ++ F
Sbjct: 430 ELVVTGHKDGSLKFWQETGEHLQILYKLKSSSHF 463
Score = 33.9 bits (74), Expect = 0.13
Identities = 16/50 (32%), Positives = 27/50 (54%)
Frame = -1
Query: 695 TPYGPYPCKAITKILNRTSVDGEDITIFAGGMPRASYSDRYTVTVQQGEK 546
TP+G PC+ I ++ + + E I +F+GGMP +T+ +G K
Sbjct: 265 TPHGSGPCRPIQQVEWKHMSETESIIMFSGGMPTDDGLPMPALTILKGGK 314
>AY997305-1|AAY44302.1| 1128|Caenorhabditis elegans TOM-1 isoform D
protein.
Length = 1128
Score = 61.3 bits (142), Expect = 8e-10
Identities = 26/94 (27%), Positives = 49/94 (52%)
Frame = -1
Query: 329 PYLVSVHASAVTTAQLADGVAPAVYDNIVAAGQQQTENQYSESPWPISGGVVETAELTDR 150
P+ +++H S VT + + G +Q ++S WP++GG+ +
Sbjct: 370 PHAMNIHESPVTCMAYYSDCPLDLIGALTLVGTKQRNKEFSARSWPVTGGLGRECATGHQ 429
Query: 149 QVLLTGHEDGSVRFWDVTGVAMTPLYKYTTAQLF 48
++++TGH+DGS++FW TG + LYK ++ F
Sbjct: 430 ELVVTGHKDGSLKFWQETGEHLQILYKLKSSSHF 463
Score = 33.9 bits (74), Expect = 0.13
Identities = 16/50 (32%), Positives = 27/50 (54%)
Frame = -1
Query: 695 TPYGPYPCKAITKILNRTSVDGEDITIFAGGMPRASYSDRYTVTVQQGEK 546
TP+G PC+ I ++ + + E I +F+GGMP +T+ +G K
Sbjct: 265 TPHGSGPCRPIQQVEWKHMSETESIIMFSGGMPTDDGLPMPALTILKGGK 314
>AY912103-1|AAX89146.1| 1058|Caenorhabditis elegans tomosyn protein.
Length = 1058
Score = 61.3 bits (142), Expect = 8e-10
Identities = 26/94 (27%), Positives = 49/94 (52%)
Frame = -1
Query: 329 PYLVSVHASAVTTAQLADGVAPAVYDNIVAAGQQQTENQYSESPWPISGGVVETAELTDR 150
P+ +++H S VT + + G +Q ++S WP++GG+ +
Sbjct: 335 PHAMNIHESPVTCMAYYSDCPLDLIGALTLVGTKQRNKEFSARSWPVTGGLGRECATGHQ 394
Query: 149 QVLLTGHEDGSVRFWDVTGVAMTPLYKYTTAQLF 48
++++TGH+DGS++FW TG + LYK ++ F
Sbjct: 395 ELVVTGHKDGSLKFWQETGEHLQILYKLKSSSHF 428
Score = 33.9 bits (74), Expect = 0.13
Identities = 16/50 (32%), Positives = 27/50 (54%)
Frame = -1
Query: 695 TPYGPYPCKAITKILNRTSVDGEDITIFAGGMPRASYSDRYTVTVQQGEK 546
TP+G PC+ I ++ + + E I +F+GGMP +T+ +G K
Sbjct: 230 TPHGSGPCRPIQQVEWKHMSETESIIMFSGGMPTDDGLPMPALTILKGGK 279
>AY912102-1|AAX89145.1| 1124|Caenorhabditis elegans tomosyn isoform
A protein.
Length = 1124
Score = 61.3 bits (142), Expect = 8e-10
Identities = 26/94 (27%), Positives = 49/94 (52%)
Frame = -1
Query: 329 PYLVSVHASAVTTAQLADGVAPAVYDNIVAAGQQQTENQYSESPWPISGGVVETAELTDR 150
P+ +++H S VT + + G +Q ++S WP++GG+ +
Sbjct: 370 PHAMNIHESPVTCMAYYSDCPLDLIGALTLVGTKQRNKEFSARSWPVTGGLGRECATGHQ 429
Query: 149 QVLLTGHEDGSVRFWDVTGVAMTPLYKYTTAQLF 48
++++TGH+DGS++FW TG + LYK ++ F
Sbjct: 430 ELVVTGHKDGSLKFWQETGEHLQILYKLKSSSHF 463
Score = 33.9 bits (74), Expect = 0.13
Identities = 16/50 (32%), Positives = 27/50 (54%)
Frame = -1
Query: 695 TPYGPYPCKAITKILNRTSVDGEDITIFAGGMPRASYSDRYTVTVQQGEK 546
TP+G PC+ I ++ + + E I +F+GGMP +T+ +G K
Sbjct: 265 TPHGSGPCRPIQQVEWKHMSETESIIMFSGGMPTDDGLPMPALTILKGGK 314
>U51993-3|AAB36853.2| 958|Caenorhabditis elegans Hypothetical
protein F56F10.4 protein.
Length = 958
Score = 58.0 bits (134), Expect = 7e-09
Identities = 57/250 (22%), Positives = 95/250 (38%), Gaps = 10/250 (4%)
Frame = -1
Query: 767 YXKXRFYVTWXCRXXQXXTLKEPVTPYGPYPCKAIT--KILNRTSVDGEDITIFAGGMPR 594
Y K F V C+ +GPYPC I + S E+ I+ GG
Sbjct: 247 YTKWEFTVGKDCQISAQEVNVYSANQFGPYPCHQIRHFSVCADASDPNENFLIYQGGKSS 306
Query: 593 ASYSDRYTVTVQQGEKHVXFDFTSRVIDLFTTTPVPPDGAPLQEEQPDT--PXXXXXXXX 420
Y DR +T+ G+ + +S ++ + V G+ E + P
Sbjct: 307 GKYDDRDLITISHGDFVEKLELSSEIVGI-----VGVSGSYGTENYSNYFFPNFEYVPED 361
Query: 419 XXXXXXXXXXXXXXXXVIDLYDARWRPLRLPYLVSVHASAVTTAQLADGVAPAVYDNIVA 240
IDL ++ + +S++ S TT A + V++ + +
Sbjct: 362 CKKSGVVLICTKCEIIGIDLERESLNMMQPKHFLSINNSTPTTHSRAIEIEENVWNRLES 421
Query: 239 AGQQQTE-NQYSESPWPIS--GGVVETAE---LTDRQVLLTGHEDGSVRFWDVTGVAMTP 78
A + E NQ S WP++ +V A + RQV L+GH +G++ W GV M+
Sbjct: 422 ASKSYWETNQMSTRDWPLNFQKKIVTDANHQRASYRQVYLSGHSNGNICIWSSGGVGMSL 481
Query: 77 LYKYTTAQLF 48
+ T+ F
Sbjct: 482 MLVIRTSLEF 491
>Z83102-5|CAB05468.1| 179|Caenorhabditis elegans Hypothetical
protein C54C8.6 protein.
Length = 179
Score = 29.9 bits (64), Expect = 2.2
Identities = 15/45 (33%), Positives = 25/45 (55%)
Frame = -1
Query: 317 SVHASAVTTAQLADGVAPAVYDNIVAAGQQQTENQYSESPWPISG 183
S+H S +T++ L D AP V+ N+V G + + P+P +G
Sbjct: 28 SIHCSTLTSSGLFDSTAPRVFKNLVNYG---GDMWFYMKPYPSNG 69
>AL021487-10|CAA16357.2| 1592|Caenorhabditis elegans Hypothetical
protein Y45F10B.10 protein.
Length = 1592
Score = 28.7 bits (61), Expect = 5.0
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = -1
Query: 188 SGGVVETAELTDRQVLLTGHEDGSVRFWDVT 96
+G VV ++ Q L+TG D V+ WDVT
Sbjct: 995 TGSVVSLQLTSNNQFLITGSGDFVVQMWDVT 1025
>Z98866-23|CAB11557.2| 399|Caenorhabditis elegans Hypothetical
protein Y49E10.24 protein.
Length = 399
Score = 28.3 bits (60), Expect = 6.6
Identities = 14/40 (35%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +3
Query: 501 CEQIYHPAREVEGHMFLALLHCNRV-PVGVRSSGHATGKY 617
CEQIY P +EG++ L +V + + + G AT K+
Sbjct: 12 CEQIYEPGGTIEGYVTFDLRESVKVKAIRISAEGLATTKW 51
>Z66567-1|CAA91491.1| 887|Caenorhabditis elegans Hypothetical
protein ZK455.1 protein.
Length = 887
Score = 27.9 bits (59), Expect = 8.8
Identities = 20/60 (33%), Positives = 26/60 (43%), Gaps = 3/60 (5%)
Frame = -1
Query: 665 ITKILNRTSVDGEDITIFAGGMPRASYSDRYTVT---VQQGEKHVXFDFTSRVIDLFTTT 495
ITK L V G+ + F G+ S +DR T+ + G F SR ID T T
Sbjct: 263 ITKNLRDLGVVGKFVEFFGTGVASLSIADRATIANMCPEYGATIGFFPVDSRTIDYLTQT 322
>AF101309-3|AAN60514.1| 760|Caenorhabditis elegans Hypothetical
protein H24G06.1c protein.
Length = 760
Score = 27.9 bits (59), Expect = 8.8
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = -1
Query: 143 LLTGHEDGSVRFWDVTG 93
L+TG DG++RFW+ G
Sbjct: 406 LITGGSDGTIRFWNFNG 422
>AF101309-2|AAL32230.1| 1601|Caenorhabditis elegans Hypothetical
protein H24G06.1b protein.
Length = 1601
Score = 27.9 bits (59), Expect = 8.8
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = -1
Query: 143 LLTGHEDGSVRFWDVTG 93
L+TG DG++RFW+ G
Sbjct: 406 LITGGSDGTIRFWNFNG 422
>AF101309-1|AAL32229.1| 1680|Caenorhabditis elegans Hypothetical
protein H24G06.1a protein.
Length = 1680
Score = 27.9 bits (59), Expect = 8.8
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = -1
Query: 143 LLTGHEDGSVRFWDVTG 93
L+TG DG++RFW+ G
Sbjct: 406 LITGGSDGTIRFWNFNG 422
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,521,480
Number of Sequences: 27780
Number of extensions: 222821
Number of successful extensions: 700
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 625
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 700
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1914239236
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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