Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP10_T7_M19
         (813 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_06_0351 + 22466160-22466217,22466514-22467052,22467186-224672...    31   1.4  
01_01_0642 + 4852218-4852305,4852655-4852884,4853103-4853129           31   1.4  
12_02_1142 + 26432634-26432786,26433222-26433314,26433465-264338...    30   2.5  
11_01_0432 + 3313060-3313107,3313610-3313753,3314510-3314662,331...    29   4.4  

>09_06_0351 +
           22466160-22466217,22466514-22467052,22467186-22467293,
           22467391-22467546,22467916-22468131,22468639-22468776,
           22468880-22468981,22469089-22469146,22469346-22469408,
           22469543-22469640
          Length = 511

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 21/73 (28%), Positives = 33/73 (45%), Gaps = 1/73 (1%)
 Frame = -1

Query: 528 SEPPWFVRNVDLHDDLDLESISKYLQSASMRHFDKAARHENPLIVAAGNYIPDPADRMES 349
           S PP   +   L     +  +S Y +S SM  F  +AR   P++ ++ NY+         
Sbjct: 33  SSPPTRDKFSRLTTRTTIFQVSNYSRSTSMERFQLSARFHQPVVDSSTNYLTRWFYNANL 92

Query: 348 SRRRPK-HVISDP 313
            RRR +  + SDP
Sbjct: 93  KRRRIECFLTSDP 105


>01_01_0642 + 4852218-4852305,4852655-4852884,4853103-4853129
          Length = 114

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 15/43 (34%), Positives = 25/43 (58%)
 Frame = +2

Query: 266 ENGELEVPKSTVSGSGGSEMTCFGRRRLLSILSAGSGM*LPAA 394
           +N ++E+  S VSG   +E+   GR +  S+ S G G+ + AA
Sbjct: 35  DNAKMELLLSQVSGKDITELIACGREKFASVPSGGGGVAVAAA 77


>12_02_1142 +
           26432634-26432786,26433222-26433314,26433465-26433821,
           26433883-26434188,26434251-26434259
          Length = 305

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 13/41 (31%), Positives = 22/41 (53%)
 Frame = +2

Query: 209 LCLRVNLLVEPFVASDGFDENGELEVPKSTVSGSGGSEMTC 331
           +CL+  ++V      DG + NG+    K  V+G G + +TC
Sbjct: 255 VCLQETMMVTVLAQVDGTEYNGQTMHFKPVVNGEGEARITC 295


>11_01_0432 +
           3313060-3313107,3313610-3313753,3314510-3314662,
           3315283-3315792,3315888-3317423,3317505-3317573,
           3317742-3317807,3318517-3318640,3319464-3319690
          Length = 958

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 19/57 (33%), Positives = 26/57 (45%)
 Frame = -1

Query: 252 LATKGSTSKLTLRHSPLSFSPDLLSGSRFRSGGRFCEARLLLGFVLATSSGLSPVSS 82
           L TKG    +T+ H P+ FSP         S G   E+ L      + S GL P+S+
Sbjct: 203 LETKGKRLSVTVTHFPMIFSPISSRTFVLPSEGTMAESCLSNHHEDSLSPGLPPIST 259


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,964,643
Number of Sequences: 37544
Number of extensions: 302537
Number of successful extensions: 921
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 898
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 921
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2221181676
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)