Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP10_T7_M14
         (807 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_06_0610 - 25449085-25453284                                         30   1.9  
05_01_0558 - 4880811-4880996,4881098-4881178,4881247-4881393,488...    29   3.3  
09_02_0109 - 4372621-4373024,4373498-4373760,4373988-4374157           29   4.4  
01_01_1110 + 8789741-8790616                                           29   5.8  
09_04_0541 + 18437075-18440062                                         28   7.6  

>11_06_0610 - 25449085-25453284
          Length = 1399

 Score = 30.3 bits (65), Expect = 1.9
 Identities = 15/34 (44%), Positives = 18/34 (52%)
 Frame = -1

Query: 453  KEMQPPAILSPFSSPPSIEQPKPRQRQHSNSEPE 352
            KE +PP   +P SSPPS E+  P     S   PE
Sbjct: 911  KESEPPPTPTPKSSPPSHEEYVPPSPAKSTPPPE 944



 Score = 29.9 bits (64), Expect = 2.5
 Identities = 19/51 (37%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
 Frame = -1

Query: 453  KEMQPPAILSPFSSPPSIEQPKPRQRQHSNSEPE--LVPVMKKIDETPGYE 307
            +E +PP   +P SSPPS E+  P     S   PE  L P    I+ +P  E
Sbjct: 961  EESEPPPSPTPKSSPPSHEEYVPPSPAKSTPPPEKPLPPHTPTINSSPPSE 1011


>05_01_0558 -
           4880811-4880996,4881098-4881178,4881247-4881393,
           4881985-4882029,4882370-4883134
          Length = 407

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 15/35 (42%), Positives = 19/35 (54%)
 Frame = -1

Query: 447 MQPPAILSPFSSPPSIEQPKPRQRQHSNSEPELVP 343
           ++PP  LSPFS+PP  E  +   R HS S     P
Sbjct: 34  LRPPHRLSPFSAPPP-EPHRLTYRTHSTSSSSRTP 67


>09_02_0109 - 4372621-4373024,4373498-4373760,4373988-4374157
          Length = 278

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 13/51 (25%), Positives = 27/51 (52%)
 Frame = -1

Query: 426 SPFSSPPSIEQPKPRQRQHSNSEPELVPVMKKIDETPGYENIMKENQRIIK 274
           S  S+PP  ++ K  +R+ S   P L P  + +  +PG+   ++  +R ++
Sbjct: 61  SGLSAPPWSQRVKKLRRKPSRPSPALAPAARHLLASPGHGGRLERRRRCMQ 111


>01_01_1110 + 8789741-8790616
          Length = 291

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 12/37 (32%), Positives = 19/37 (51%)
 Frame = -1

Query: 417 SSPPSIEQPKPRQRQHSNSEPELVPVMKKIDETPGYE 307
           S+PP+I +  P      +S P     M+K   +PGY+
Sbjct: 7   STPPAISRADPSSSSRGHSLPTDADSMRKARRSPGYQ 43


>09_04_0541 + 18437075-18440062
          Length = 995

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 13/38 (34%), Positives = 21/38 (55%), Gaps = 3/38 (7%)
 Frame = -1

Query: 462 AAIKEMQPPAILSPFSSPPSIEQPK---PRQRQHSNSE 358
           A +  +Q P +    + PP  +QP+   PRQRQH  ++
Sbjct: 63  AFVSALQSPYVSPRLADPPPPQQPQPQTPRQRQHRETK 100


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,472,694
Number of Sequences: 37544
Number of extensions: 206911
Number of successful extensions: 766
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 663
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 757
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2197677108
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)