Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP10_T7_M12
(808 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_01_0515 - 4490855-4490902,4490992-4491072,4491752-4491823,449... 187 8e-48
01_05_0816 + 25462571-25462630,25462752-25462838,25462929-254629... 108 4e-24
03_04_0228 - 18989688-18989807,18990300-18990345,18990452-189905... 85 5e-17
01_05_0818 + 25468257-25468271,25468504-25468575,25469647-254697... 53 2e-07
07_03_1093 + 23912303-23912467,23912671-23912801,23913079-239130... 42 6e-04
03_06_0030 + 31161821-31161927,31163700-31163934,31164064-311648... 40 0.003
03_02_1033 + 13550955-13551700,13552837-13553290,13553451-135536... 35 0.066
03_02_1031 + 13541327-13542072,13543209-13543662,13543823-135440... 35 0.066
11_06_0152 + 20669949-20670326,20670887-20670997,20671079-206712... 33 0.35
01_01_1069 - 8420454-8420670,8421272-8421447,8421556-8421738,842... 32 0.47
04_04_1592 - 34649484-34649547,34650118-34650186,34650325-346504... 31 1.4
08_02_0632 + 19515234-19515374,19515489-19515656,19518907-195189... 29 3.3
05_01_0579 - 5196888-5196970,5197063-5197621,5197704-5197786,519... 29 3.3
10_01_0136 - 1639780-1639901,1640038-1640093,1641958-1642061,164... 29 5.8
06_03_0914 + 25920277-25920405,25920783-25920810,25920890-259209... 29 5.8
05_07_0031 - 27183252-27183317,27183542-27184282 29 5.8
04_01_0083 + 904473-905167,905247-905347,905902-905994,907322-90... 29 5.8
05_05_0276 + 23771233-23771268,23773552-23773897,23774425-237745... 28 7.6
>08_01_0515 -
4490855-4490902,4490992-4491072,4491752-4491823,
4492296-4492373,4493316-4493444,4493862-4493942,
4494064-4494205,4494672-4494865,4494962-4495027,
4495108-4495194,4495326-4495376
Length = 342
Score = 187 bits (456), Expect = 8e-48
Identities = 91/199 (45%), Positives = 125/199 (62%), Gaps = 2/199 (1%)
Frame = -1
Query: 772 LTERAYCADVEYPMAVVGTADXGICMYTXEGKPAEFKRIESPLKHQHRCVSIFKDMKSKQ 593
L ER Y V YP+ +VGTAD + ++ + EFKRI+SPLK+Q RC++ F D +
Sbjct: 148 LPERCYALTVNYPLMIVGTADRNLVVFNLQNPQTEFKRIQSPLKYQTRCLAAFPDQQ--- 204
Query: 592 PTGFALGSVEXRVAIQYVNPTNPKDNFTFKCHRTTGAVGGYQDIYAVNDIAFHPVHGTLA 413
GF +GS+E RV + +++ + NFTFKCHR DI++VN + FHPVH T A
Sbjct: 205 --GFLVGSIEGRVGVHHIDDSQQSKNFTFKCHREGN------DIFSVNSLNFHPVHHTFA 256
Query: 412 TVGSDGSFSFWDKDARTKLKSTELLDQSLTKCAFNHSGQIFAYAVGYDWSKGHEHYNP-N 236
T GSDG+F+FWDKD++ +LK+ + FN G IFAYAV YDWS+G E++NP
Sbjct: 257 TAGSDGAFNFWDKDSKQRLKAFSRCPLPIPCSTFNSDGSIFAYAVCYDWSRGAENHNPAT 316
Query: 235 KKTFIYLRASYE-ELKARP 182
KT IYL + E E+K +P
Sbjct: 317 AKTSIYLHSPQESEVKGKP 335
>01_05_0816 +
25462571-25462630,25462752-25462838,25462929-25462961,
25462962-25463030,25463146-25463339,25463632-25463773,
25464126-25464165,25464428-25464594,25465114-25465116,
25465371-25465499,25465811-25465888,25465974-25465979
Length = 335
Score = 108 bits (260), Expect = 4e-24
Identities = 57/109 (52%), Positives = 71/109 (65%), Gaps = 1/109 (0%)
Frame = -1
Query: 673 AEFKRIESPLKHQHRCVSIFKDMKSKQPTGFA-LGSVEXRVAIQYVNPTNPKDNFTFKCH 497
AEFKRI SPLK Q RC++ F D + GF +GS+E RV + +V+ NFTFKCH
Sbjct: 238 AEFKRIVSPLKLQTRCLAAFPDQQ-----GFLQVGSIEGRVGVHHVDDGQQGKNFTFKCH 292
Query: 496 RTTGAVGGYQDIYAVNDIAFHPVHGTLATVGSDGSFSFWDKDARTKLKS 350
R DIYAVN + FHPVH T AT GSDG F+FWDKD++ +LK+
Sbjct: 293 RDGN------DIYAVNALNFHPVHHTFATSGSDGGFNFWDKDSKQRLKT 335
Score = 33.5 bits (73), Expect = 0.20
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = -1
Query: 790 PSMTFNLTERAYCADVEYPMAVVGTADXGICMYTXE 683
P+ L ER Y + YP+ VVGTAD + ++ +
Sbjct: 157 PAHVQQLPERCYALSLSYPLMVVGTADRNVIVFNMQ 192
>03_04_0228 -
18989688-18989807,18990300-18990345,18990452-18990552,
18990624-18990702,18990788-18990868,18991440-18991502,
18994171-18994246,18994980-18995246,18995994-18996076,
18996792-18996922,18997043-18997174
Length = 392
Score = 85.4 bits (202), Expect = 5e-17
Identities = 59/205 (28%), Positives = 93/205 (45%), Gaps = 23/205 (11%)
Frame = -1
Query: 781 TFNLTERAYCADVEYPMAVVGTADXGICMYTXEGKPAEFKRIESPLKHQHRCVSIFKDMK 602
T+ ER Y + VV TA + +Y ++ +S LK+Q RCV F +
Sbjct: 145 TYAQPERVYSLSLVGNRLVVATAGRHVNIYDLRNMSQHEQKRDSSLKYQTRCVRCFPN-- 202
Query: 601 SKQPTGFALGSVEXRVAIQYVNPTNPKDN-----------------------FTFKCHRT 491
TG+AL SVE RV++++ + + + + FKCHR
Sbjct: 203 ---GTGYALSSVEGRVSMEFFDLSESAQSKKIGVVRPCCLLRSLKFVCRELRYAFKCHRK 259
Query: 490 TGAVGGYQDIYAVNDIAFHPVHGTLATVGSDGSFSFWDKDARTKLKSTELLDQSLTKCAF 311
+ A G +Y VN IAFHP++GT AT G DG + WD + +L S+ +F
Sbjct: 260 SEA--GRDTVYPVNAIAFHPIYGTFATGGCDGFVNVWDGINKKRLYQYSKYASSIAALSF 317
Query: 310 NHSGQIFAYAVGYDWSKGHEHYNPN 236
+ G + A A Y + +G + + P+
Sbjct: 318 SKDGHLLAVASSYTYEEGEKSHEPD 342
>01_05_0818 +
25468257-25468271,25468504-25468575,25469647-25469727,
25470008-25470049
Length = 69
Score = 53.2 bits (122), Expect = 2e-07
Identities = 27/51 (52%), Positives = 34/51 (66%), Gaps = 2/51 (3%)
Frame = -1
Query: 328 LTKCAFNHSGQIFAYAVGYDWSKGHEHYNPN-KKTFIYLRASYE-ELKARP 182
+T FN G IFAYAV YDWSKG E +NP+ KT I+L + E E+K +P
Sbjct: 14 ITCSTFNQDGSIFAYAVCYDWSKGAEKHNPSTAKTNIFLHSVQESEVKGKP 64
>07_03_1093 +
23912303-23912467,23912671-23912801,23913079-23913087,
23913146-23913228,23914494-23914596,23915988-23916066,
23916174-23916274,23916371-23916479
Length = 259
Score = 41.9 bits (94), Expect = 6e-04
Identities = 26/83 (31%), Positives = 40/83 (48%), Gaps = 1/83 (1%)
Frame = -1
Query: 427 HGTLATVGSDGSFSFWDKDARTKLKSTELLDQSLTKCAFNHSGQIFAYAVGYDWSKGHEH 248
HGT AT G D + WD R KL S+ +F+ G++ A A Y + +G
Sbjct: 165 HGTFATGGCDRFVNLWDGANRRKLFQFPRYPSSIAALSFSRDGRLLAVASSYTYEEGDIP 224
Query: 247 YNPNKKTFIYLRASYE-ELKARP 182
+ P+ I++R E ++K RP
Sbjct: 225 HPPDA---IFIRDVNEVQVKPRP 244
>03_06_0030 + 31161821-31161927,31163700-31163934,31164064-31164826,
31165816-31167650,31169294-31169424,31169993-31170075,
31170426-31170680,31171125-31171220,31171695-31171775,
31171811-31171968,31172434-31172534,31172614-31172629,
31173390-31173439,31174558-31174588,31175156-31175305,
31176135-31176173,31176288-31176410,31176496-31176552,
31176837-31176911,31177003-31177107
Length = 1496
Score = 39.5 bits (88), Expect = 0.003
Identities = 19/60 (31%), Positives = 30/60 (50%)
Frame = -1
Query: 421 TLATVGSDGSFSFWDKDARTKLKSTELLDQSLTKCAFNHSGQIFAYAVGYDWSKGHEHYN 242
T T ++G WD ++ KL + S+ AFNH+GQIFA A ++ + + N
Sbjct: 1225 TFVTGDNEGYVIAWDAQSKKKLHEFPIYSGSVASIAFNHNGQIFAVASNSNYQESDKICN 1284
>03_02_1033 +
13550955-13551700,13552837-13553290,13553451-13553648,
13553726-13553807,13554496-13554590
Length = 524
Score = 35.1 bits (77), Expect = 0.066
Identities = 21/56 (37%), Positives = 27/56 (48%)
Frame = -1
Query: 448 DIAFHPVHGTLATVGSDGSFSFWDKDARTKLKSTELLDQSLTKCAFNHSGQIFAYA 281
D+AF PV LAT +D + W D L LD+ L + AF+ SG A A
Sbjct: 278 DVAFSPVDDCLATASADKTAKLWKTDGSLLLSFDGHLDR-LARLAFHPSGGYLATA 332
Score = 32.3 bits (70), Expect = 0.47
Identities = 17/53 (32%), Positives = 26/53 (49%)
Frame = -1
Query: 445 IAFHPVHGTLATVGSDGSFSFWDKDARTKLKSTELLDQSLTKCAFNHSGQIFA 287
+AFHP G LAT D ++ WD +L E +S+ +F+ G + A
Sbjct: 320 LAFHPSGGYLATASFDKTWRLWDVSTGKELLLQEGHSRSVYGVSFHPDGSLAA 372
>03_02_1031 +
13541327-13542072,13543209-13543662,13543823-13544020,
13544098-13544179,13544868-13544962
Length = 524
Score = 35.1 bits (77), Expect = 0.066
Identities = 21/56 (37%), Positives = 27/56 (48%)
Frame = -1
Query: 448 DIAFHPVHGTLATVGSDGSFSFWDKDARTKLKSTELLDQSLTKCAFNHSGQIFAYA 281
D+AF PV LAT +D + W D L LD+ L + AF+ SG A A
Sbjct: 278 DVAFSPVDDCLATASADKTAKLWKTDGSLLLSFDGHLDR-LARLAFHPSGGYLATA 332
Score = 32.3 bits (70), Expect = 0.47
Identities = 17/53 (32%), Positives = 26/53 (49%)
Frame = -1
Query: 445 IAFHPVHGTLATVGSDGSFSFWDKDARTKLKSTELLDQSLTKCAFNHSGQIFA 287
+AFHP G LAT D ++ WD +L E +S+ +F+ G + A
Sbjct: 320 LAFHPSGGYLATASFDKTWRLWDVSTGKELLLQEGHSRSVYGVSFHPDGSLAA 372
>11_06_0152 +
20669949-20670326,20670887-20670997,20671079-20671280,
20671393-20671675,20672145-20672234,20672366-20672473,
20672595-20672975,20673250-20673324,20673685-20673797,
20676233-20676742,20676807-20677300
Length = 914
Score = 32.7 bits (71), Expect = 0.35
Identities = 16/61 (26%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
Frame = -2
Query: 255 TSTTTP-IRRRSFTCEHLTKNSKRVRHNNPTIDSSTPGRSPQPTDNAQCTALGTSTTD-C 82
++T +P R+ SF+ N+ H PT++ P D +QC+ + + T + C
Sbjct: 494 SATYSPNTRKHSFSSSRFASNTHVRLHGQPTLELFAASNLTSPNDGSQCSLIASETEEMC 553
Query: 81 V 79
V
Sbjct: 554 V 554
>01_01_1069 -
8420454-8420670,8421272-8421447,8421556-8421738,
8421885-8421980,8422064-8422192,8422266-8422445,
8422524-8422634,8422714-8422869,8422983-8423078,
8423160-8423327,8423402-8423642,8423724-8423851,
8424042-8424134,8424214-8424309,8424431-8424523,
8424741-8424850,8424999-8425134,8425215-8425315,
8426029-8426152,8426237-8426411,8426523-8426681,
8427423-8427536,8427669-8427848,8428926-8429005
Length = 1113
Score = 32.3 bits (70), Expect = 0.47
Identities = 18/58 (31%), Positives = 22/58 (37%), Gaps = 2/58 (3%)
Frame = -1
Query: 454 VNDIAFHPVHGTLATVGSDGSFSFWDKDARTKLKSTELLD--QSLTKCAFNHSGQIFA 287
V + F + G D FWD D T L STE L + FN G + A
Sbjct: 568 VGVVQFDTAQNHILAAGEDNQIKFWDVDNTTMLSSTEADGGLPGLPRLRFNKEGNLLA 625
Score = 29.9 bits (64), Expect = 2.5
Identities = 21/78 (26%), Positives = 32/78 (41%), Gaps = 3/78 (3%)
Frame = -1
Query: 457 AVNDIAFHPVHGTLATVGS-DGSFSFWDKDARTKLKSTELLDQSLTKCA--FNHSGQIFA 287
+V + FHP TL VGS +G + W+ R +L S + C+ F S +
Sbjct: 341 SVTSMDFHPTRHTLLLVGSTNGEITLWEVGMRERLFSKPFKIWDIQACSPQFQVSFVVSG 400
Query: 286 YAVGYDWSKGHEHYNPNK 233
A H + PN+
Sbjct: 401 VAFAKHLIHLHAYQQPNE 418
>04_04_1592 -
34649484-34649547,34650118-34650186,34650325-34650444,
34650630-34650742,34650824-34650898,34651224-34651346,
34651427-34651446,34652354-34652410,34652922-34653860,
34653961-34654189,34654296-34654439,34654527-34654601,
34655363-34655433,34656103-34656205,34656407-34656633,
34656791-34656908,34657239-34657369,34657709-34657802
Length = 923
Score = 30.7 bits (66), Expect = 1.4
Identities = 17/50 (34%), Positives = 22/50 (44%)
Frame = -1
Query: 445 IAFHPVHGTLATVGSDGSFSFWDKDARTKLKSTELLDQSLTKCAFNHSGQ 296
I FHP LAT SD + FWD + + ST + FN G+
Sbjct: 213 IDFHPHEFLLATGSSDKTVKFWDLETFELIGSTGPETTGVRSMTFNPDGR 262
>08_02_0632 +
19515234-19515374,19515489-19515656,19518907-19518993,
19519551-19519685,19519778-19519882,19519968-19520059,
19520147-19520252,19520320-19520424,19520516-19520929
Length = 450
Score = 29.5 bits (63), Expect = 3.3
Identities = 25/90 (27%), Positives = 40/90 (44%), Gaps = 3/90 (3%)
Frame = -1
Query: 505 KCHRTTGAVGGYQDIYAVNDIAFHPVHGTLATVGSDGSFSFWDKDARTKLKSTELLDQSL 326
KC + GA+ G+ D + A+HP LAT D + W D R +S +L +
Sbjct: 310 KCGKAIGALKGHLDYSFAS--AWHPDGNILATGSQDTTCRLW--DIRNLSESVAVLGGRM 365
Query: 325 --TKC-AFNHSGQIFAYAVGYDWSKGHEHY 245
+C F+ G+ A A D+ ++ Y
Sbjct: 366 GSIRCIKFSSDGRFLATAEPVDFVHIYDSY 395
>05_01_0579 -
5196888-5196970,5197063-5197621,5197704-5197786,
5199165-5199279,5199376-5199473,5200136-5200183,
5200313-5200415,5201003-5201119,5201254-5201430,
5202563-5202593,5203492-5203604,5203824-5204036
Length = 579
Score = 29.5 bits (63), Expect = 3.3
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = -2
Query: 255 TSTTTPIRRRSFTCEHLTKNSKRVRHNNP 169
T+T++P+RR C HL S + + NP
Sbjct: 152 TTTSSPLRRMESVCRHLLPASPPILYQNP 180
>10_01_0136 -
1639780-1639901,1640038-1640093,1641958-1642061,
1642119-1642301,1642963-1643073,1643175-1643330,
1644627-1644866,1646496-1646603,1646764-1647903
Length = 739
Score = 28.7 bits (61), Expect = 5.8
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = -2
Query: 228 RSFTCEHLTKNSKRVRHNNPTIDSSTPGRSPQ 133
RSFTCEHL R ++P + GR P+
Sbjct: 565 RSFTCEHLMSVKVRCSEDDPMLWQKRFGRLPK 596
>06_03_0914 +
25920277-25920405,25920783-25920810,25920890-25920990,
25921356-25921479,25921793-25921903,25922222-25922397,
25922766-25922848,25922935-25923007,25923630-25923695,
25923776-25923818,25924600-25924739,25924878-25925090,
25925397-25925481,25925558-25925852,25926855-25927110,
25927237-25927450,25927701-25927912,25928054-25928203
Length = 832
Score = 28.7 bits (61), Expect = 5.8
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = -1
Query: 457 AVNDIAFHPVHGTLATVGSDGSFSFWDKDARTKLKSTELLDQSLTKCAFNHSGQ 296
+V IA+H +G LATV D +D A ++ E +T F+ G+
Sbjct: 447 SVTKIAYHRANGLLATVADDMVLILFDTVAMKMVRRFEGHTDRVTDLCFSEDGK 500
>05_07_0031 - 27183252-27183317,27183542-27184282
Length = 268
Score = 28.7 bits (61), Expect = 5.8
Identities = 15/32 (46%), Positives = 16/32 (50%)
Frame = -3
Query: 629 LRLHLQGHEEQAADRLRAGQRGGPRGHPVREP 534
LR+ L GH AADRLR Q P P P
Sbjct: 95 LRVKLMGHLRDAADRLRVPQPSPPPPPPPPPP 126
>04_01_0083 +
904473-905167,905247-905347,905902-905994,907322-907968
Length = 511
Score = 28.7 bits (61), Expect = 5.8
Identities = 21/67 (31%), Positives = 31/67 (46%)
Frame = -2
Query: 291 LPTRSGMTGLRVTSTTTPIRRRSFTCEHLTKNSKRVRHNNPTIDSSTPGRSPQPTDNAQC 112
LP+ S + T+T T RRR H ++KR + P S TP R+P P +
Sbjct: 8 LPSSSSSSSKTATATDTSDRRRH---HHHHNHTKRKKKPPPPPLSPTP-RTPPPAGSGSH 63
Query: 111 TALGTST 91
A+ S+
Sbjct: 64 RAMAASS 70
>05_05_0276 +
23771233-23771268,23773552-23773897,23774425-23774541,
23774712-23774810,23774949-23775016,23775107-23775181,
23775386-23775931,23776040-23776092,23776163-23776204,
23776314-23776458,23776541-23776651,23777496-23777921,
23778116-23778373
Length = 773
Score = 28.3 bits (60), Expect = 7.6
Identities = 12/31 (38%), Positives = 14/31 (45%)
Frame = -3
Query: 614 QGHEEQAADRLRAGQRGGPRGHPVREPDQPQ 522
Q HE QA +R GP H V+ P Q
Sbjct: 279 QNHEPQAQKSVRLQSSSGPESHKVQSPKSSQ 309
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,721,184
Number of Sequences: 37544
Number of extensions: 322937
Number of successful extensions: 1206
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1139
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1200
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2197677108
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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