Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP10_T7_M11
         (813 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_02_0072 + 11152988-11153102,11153581-11153705,11153860-111540...    28   7.7  

>06_02_0072 +
           11152988-11153102,11153581-11153705,11153860-11154004,
           11154219-11154284,11154418-11154540,11154839-11154961,
           11156065-11156193,11156510-11156632,11156737-11156838,
           11156943-11157065,11157169-11157270,11157370-11157492,
           11157791-11157913,11158209-11158331,11158633-11158761,
           11160210-11161039
          Length = 867

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 5/58 (8%)
 Frame = +2

Query: 569 GKTSGTLPRELPPRHGPGSAPHWTEPSHSTL-----LTRTYCIFFCQSRNPFRXYCAS 727
           G+ + T  REL    G GS+   +EP+ + +     LT  Y +F+C S  P   Y  +
Sbjct: 734 GRYNVTSVRELSAMAGSGSSSS-SEPAPAAVVACHDLTYPYAVFYCHSTKPTAAYAVT 790


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,410,125
Number of Sequences: 37544
Number of extensions: 219271
Number of successful extensions: 700
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 688
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 700
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2221181676
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)