Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP10_T7_L24
         (820 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT011339-1|AAR96131.1|  465|Drosophila melanogaster RH62603p pro...   350   1e-96
AF016835-1|AAC26144.1|  416|Drosophila melanogaster ribosomal pr...   350   1e-96
AE014297-1265|AAF54609.1|  403|Drosophila melanogaster CG4863-PE...   350   1e-96
AE014297-1264|AAN13496.1|  403|Drosophila melanogaster CG4863-PB...   350   1e-96
AE014297-1262|AAF54610.2|  416|Drosophila melanogaster CG4863-PA...   350   1e-96

>BT011339-1|AAR96131.1|  465|Drosophila melanogaster RH62603p
           protein.
          Length = 465

 Score =  350 bits (861), Expect = 1e-96
 Identities = 162/198 (81%), Positives = 173/198 (87%)
 Frame = -3

Query: 686 RTIPVDSVFAQDEMIDCIXXXXXXXXXXXTSRWHTKKLPRKTHKGLRKVACIGAWHPSRV 507
           + I V +VF QDEMIDC+           TSRWHTKKLPRKTHKGLRKVACIGAWHPSRV
Sbjct: 214 KPIQVSNVFGQDEMIDCVGVTKGKGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRV 273

Query: 506 SFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPH 327
           S TVARAGQKGYHHRTE+NKKIYRIG GIH KDGKVIKNNASTEYDL++KSITPMGGFPH
Sbjct: 274 STTVARAGQKGYHHRTEINKKIYRIGAGIHTKDGKVIKNNASTEYDLTDKSITPMGGFPH 333

Query: 326 YGEVNNDFVMIKGCCVGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTP 147
           YGEVNNDFVMIKGCC+G KKRIITLRKSL  HTKR+ALE+I LKFIDTSSK GHGRFQTP
Sbjct: 334 YGEVNNDFVMIKGCCIGSKKRIITLRKSLLKHTKRSALEQIKLKFIDTSSKMGHGRFQTP 393

Query: 146 ADKAAFMGTLKKDRIREE 93
           ADK AFMG LKKDR++EE
Sbjct: 394 ADKLAFMGPLKKDRLKEE 411


>AF016835-1|AAC26144.1|  416|Drosophila melanogaster ribosomal
           protein L3 protein.
          Length = 416

 Score =  350 bits (861), Expect = 1e-96
 Identities = 162/198 (81%), Positives = 173/198 (87%)
 Frame = -3

Query: 686 RTIPVDSVFAQDEMIDCIXXXXXXXXXXXTSRWHTKKLPRKTHKGLRKVACIGAWHPSRV 507
           + I V +VF QDEMIDC+           TSRWHTKKLPRKTHKGLRKVACIGAWHPSRV
Sbjct: 203 KPIQVSNVFGQDEMIDCVGVTKGKGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRV 262

Query: 506 SFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPH 327
           S TVARAGQKGYHHRTE+NKKIYRIG GIH KDGKVIKNNASTEYDL++KSITPMGGFPH
Sbjct: 263 STTVARAGQKGYHHRTEINKKIYRIGAGIHTKDGKVIKNNASTEYDLTDKSITPMGGFPH 322

Query: 326 YGEVNNDFVMIKGCCVGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTP 147
           YGEVNNDFVMIKGCC+G KKRIITLRKSL  HTKR+ALE+I LKFIDTSSK GHGRFQTP
Sbjct: 323 YGEVNNDFVMIKGCCIGSKKRIITLRKSLLKHTKRSALEQIKLKFIDTSSKMGHGRFQTP 382

Query: 146 ADKAAFMGTLKKDRIREE 93
           ADK AFMG LKKDR++EE
Sbjct: 383 ADKLAFMGPLKKDRLKEE 400


>AE014297-1265|AAF54609.1|  403|Drosophila melanogaster CG4863-PE,
           isoform E protein.
          Length = 403

 Score =  350 bits (861), Expect = 1e-96
 Identities = 162/198 (81%), Positives = 173/198 (87%)
 Frame = -3

Query: 686 RTIPVDSVFAQDEMIDCIXXXXXXXXXXXTSRWHTKKLPRKTHKGLRKVACIGAWHPSRV 507
           + I V +VF QDEMIDC+           TSRWHTKKLPRKTHKGLRKVACIGAWHPSRV
Sbjct: 190 KPIQVSNVFGQDEMIDCVGVTKGKGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRV 249

Query: 506 SFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPH 327
           S TVARAGQKGYHHRTE+NKKIYRIG GIH KDGKVIKNNASTEYDL++KSITPMGGFPH
Sbjct: 250 STTVARAGQKGYHHRTEINKKIYRIGAGIHTKDGKVIKNNASTEYDLTDKSITPMGGFPH 309

Query: 326 YGEVNNDFVMIKGCCVGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTP 147
           YGEVNNDFVMIKGCC+G KKRIITLRKSL  HTKR+ALE+I LKFIDTSSK GHGRFQTP
Sbjct: 310 YGEVNNDFVMIKGCCIGSKKRIITLRKSLLKHTKRSALEQIKLKFIDTSSKMGHGRFQTP 369

Query: 146 ADKAAFMGTLKKDRIREE 93
           ADK AFMG LKKDR++EE
Sbjct: 370 ADKLAFMGPLKKDRLKEE 387


>AE014297-1264|AAN13496.1|  403|Drosophila melanogaster CG4863-PB,
           isoform B protein.
          Length = 403

 Score =  350 bits (861), Expect = 1e-96
 Identities = 162/198 (81%), Positives = 173/198 (87%)
 Frame = -3

Query: 686 RTIPVDSVFAQDEMIDCIXXXXXXXXXXXTSRWHTKKLPRKTHKGLRKVACIGAWHPSRV 507
           + I V +VF QDEMIDC+           TSRWHTKKLPRKTHKGLRKVACIGAWHPSRV
Sbjct: 190 KPIQVSNVFGQDEMIDCVGVTKGKGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRV 249

Query: 506 SFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPH 327
           S TVARAGQKGYHHRTE+NKKIYRIG GIH KDGKVIKNNASTEYDL++KSITPMGGFPH
Sbjct: 250 STTVARAGQKGYHHRTEINKKIYRIGAGIHTKDGKVIKNNASTEYDLTDKSITPMGGFPH 309

Query: 326 YGEVNNDFVMIKGCCVGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTP 147
           YGEVNNDFVMIKGCC+G KKRIITLRKSL  HTKR+ALE+I LKFIDTSSK GHGRFQTP
Sbjct: 310 YGEVNNDFVMIKGCCIGSKKRIITLRKSLLKHTKRSALEQIKLKFIDTSSKMGHGRFQTP 369

Query: 146 ADKAAFMGTLKKDRIREE 93
           ADK AFMG LKKDR++EE
Sbjct: 370 ADKLAFMGPLKKDRLKEE 387


>AE014297-1262|AAF54610.2|  416|Drosophila melanogaster CG4863-PA,
           isoform A protein.
          Length = 416

 Score =  350 bits (861), Expect = 1e-96
 Identities = 162/198 (81%), Positives = 173/198 (87%)
 Frame = -3

Query: 686 RTIPVDSVFAQDEMIDCIXXXXXXXXXXXTSRWHTKKLPRKTHKGLRKVACIGAWHPSRV 507
           + I V +VF QDEMIDC+           TSRWHTKKLPRKTHKGLRKVACIGAWHPSRV
Sbjct: 203 KPIQVSNVFGQDEMIDCVGVTKGKGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRV 262

Query: 506 SFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPH 327
           S TVARAGQKGYHHRTE+NKKIYRIG GIH KDGKVIKNNASTEYDL++KSITPMGGFPH
Sbjct: 263 STTVARAGQKGYHHRTEINKKIYRIGAGIHTKDGKVIKNNASTEYDLTDKSITPMGGFPH 322

Query: 326 YGEVNNDFVMIKGCCVGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTP 147
           YGEVNNDFVMIKGCC+G KKRIITLRKSL  HTKR+ALE+I LKFIDTSSK GHGRFQTP
Sbjct: 323 YGEVNNDFVMIKGCCIGSKKRIITLRKSLLKHTKRSALEQIKLKFIDTSSKMGHGRFQTP 382

Query: 146 ADKAAFMGTLKKDRIREE 93
           ADK AFMG LKKDR++EE
Sbjct: 383 ADKLAFMGPLKKDRLKEE 400


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,843,484
Number of Sequences: 53049
Number of extensions: 695825
Number of successful extensions: 2080
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2029
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2080
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3860063376
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)