Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP10_T7_L14
(1068 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076 35 0.13
02_05_0686 - 30900748-30902167,30903442-30904742 31 1.2
07_01_0439 + 3333654-3334217 30 3.6
05_04_0303 - 20010761-20011756 30 3.6
07_03_1136 + 24218601-24218734,24218769-24219906 29 4.8
06_01_0486 - 3455030-3455770 29 4.8
12_02_0299 - 17051570-17052474,17053542-17053755 29 6.3
06_02_0119 + 12040476-12041273,12042767-12042834,12042931-12042979 29 6.3
06_01_0470 + 3336154-3336708 29 6.3
04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943... 29 6.3
02_01_0745 - 5550472-5551053 29 6.3
10_03_0023 - 7151465-7152111,7152222-7152405 29 8.3
01_07_0082 - 40965947-40967023 29 8.3
>04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076
Length = 906
Score = 34.7 bits (76), Expect = 0.13
Identities = 24/84 (28%), Positives = 24/84 (28%), Gaps = 3/84 (3%)
Frame = +2
Query: 314 PGGFXLXPRGGXGGGXKKXXPPPKKXXKKKXXXLXXLXXXNPFXXXPPPPPXXXXPXXXX 493
P L P G G G PPP PPPPP P
Sbjct: 303 PPPHPLPPGAGAGAGTGAPPPPPAHPAAPAPPPPAPSPSAAGAGSGPPPPPPPAAPAAPR 362
Query: 494 XXXX---PGAPXXKXGGGGGXPPP 556
P P G GGG PPP
Sbjct: 363 PPGPGPGPPPPPGAAGRGGGGPPP 386
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 31.5 bits (68), Expect = 1.2
Identities = 15/37 (40%), Positives = 15/37 (40%), Gaps = 2/37 (5%)
Frame = +2
Query: 452 PPPPPXXXXPXXXXXXXXPGAPXXKXGGG--GGXPPP 556
PPPPP P P P GG GG PPP
Sbjct: 344 PPPPPPAKGPPPPPPPKGPSPPPPPPPGGKKGGPPPP 380
>07_01_0439 + 3333654-3334217
Length = 187
Score = 29.9 bits (64), Expect = 3.6
Identities = 17/60 (28%), Positives = 20/60 (33%)
Frame = +2
Query: 374 PPPKKXXKKKXXXLXXLXXXNPFXXXPPPPPXXXXPXXXXXXXXPGAPXXKXGGGGGXPP 553
PPP K++ + P PPPPP P P GGGG P
Sbjct: 9 PPPSSKGKRRPGGIIRGPRPQPLIVSPPPPP----PPASRPPKKPRVVASGGGGGGDAGP 64
>05_04_0303 - 20010761-20011756
Length = 331
Score = 29.9 bits (64), Expect = 3.6
Identities = 18/56 (32%), Positives = 19/56 (33%)
Frame = -2
Query: 464 GGGGGXFXXGXKXXGXXXXXXFFXXXFLGGXLXFXPPPXXPPGGXXKXPPVXXXGG 297
GGGGG G F G + F PP P GG PP GG
Sbjct: 177 GGGGGGAGAGGSHSSGSGTDAATEHLFATGPVPFLPPGRAPAGG-DPYPPFAPMGG 231
>07_03_1136 + 24218601-24218734,24218769-24219906
Length = 423
Score = 29.5 bits (63), Expect = 4.8
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = +1
Query: 298 PPXXNTGGXFXXPPGGXXGGGKKXXXP 378
PP GG PPGG GGG P
Sbjct: 160 PPGGGRGGALGRPPGGGGGGGGPGRAP 186
>06_01_0486 - 3455030-3455770
Length = 246
Score = 29.5 bits (63), Expect = 4.8
Identities = 17/55 (30%), Positives = 19/55 (34%), Gaps = 5/55 (9%)
Frame = +1
Query: 316 GGXFXXPPGGXXGGGKKXXXPPK-----KXLXKKXLXXXXPXXXKPXXKXPPPPP 465
GG PPG GGG PP+ K P P + PP PP
Sbjct: 37 GGHHGKPPGSGSGGGGHHGKPPEHHHHHKPPPSPRCPSCHPPYTPPTPRPPPTPP 91
>12_02_0299 - 17051570-17052474,17053542-17053755
Length = 372
Score = 29.1 bits (62), Expect = 6.3
Identities = 15/48 (31%), Positives = 15/48 (31%)
Frame = +3
Query: 921 PPPPXXSFFFXSLXXXRXXXPPPXXXXPXXTPXAXPPXPXXXXXXPXP 1064
PPPP F F L P P P PP P P P
Sbjct: 292 PPPPAFPFPFPQLPPLPHFPPLPSFYPSPPPPPPPPPPPPPSFPWPFP 339
>06_02_0119 + 12040476-12041273,12042767-12042834,12042931-12042979
Length = 304
Score = 29.1 bits (62), Expect = 6.3
Identities = 17/61 (27%), Positives = 19/61 (31%)
Frame = +2
Query: 374 PPPKKXXKKKXXXLXXLXXXNPFXXXPPPPPXXXXPXXXXXXXXPGAPXXKXGGGGGXPP 553
PPP + K+ PPPPP P P G G G PP
Sbjct: 59 PPPPQPAKEPPPPTKPKHPKPKQQQHPPPPPPQKPPQGSTNLSLPNPSG--SGSGNGNPP 116
Query: 554 P 556
P
Sbjct: 117 P 117
>06_01_0470 + 3336154-3336708
Length = 184
Score = 29.1 bits (62), Expect = 6.3
Identities = 13/31 (41%), Positives = 13/31 (41%)
Frame = +2
Query: 452 PPPPPXXXXPXXXXXXXXPGAPXXKXGGGGG 544
PPPPP P AP GGGGG
Sbjct: 12 PPPPPQPTQPQQQPAAAAVRAPVGGRGGGGG 42
>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
9435445-9435526,9435610-9435660,9435749-9435829,
9435965-9436006,9436117-9436215,9438130-9438201,
9438557-9438680,9438850-9439723,9440274-9440456,
9440941-9442741,9442825-9443049,9443117-9443814,
9444519-9444591
Length = 1541
Score = 29.1 bits (62), Expect = 6.3
Identities = 15/37 (40%), Positives = 15/37 (40%), Gaps = 2/37 (5%)
Frame = +2
Query: 452 PPPPPXXXXPXXXXXXXXPGAPXXKXGGG--GGXPPP 556
PPPPP PGAP G GG PPP
Sbjct: 1184 PPPPPPRGHGGVGGPPTPPGAPAPPMPPGVPGGPPPP 1220
Score = 28.7 bits (61), Expect = 8.3
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = -2
Query: 359 PPPXXPPGGXXKXPPVXXXGG 297
PPP PPGG PP GG
Sbjct: 1109 PPPPPPPGGITGVPPPPPIGG 1129
>02_01_0745 - 5550472-5551053
Length = 193
Score = 29.1 bits (62), Expect = 6.3
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = +2
Query: 254 KKVGPPFLXKKFXXPPQXXTPGGFXLXPRGGXG 352
K++ P L + PPQ + GF P+GG G
Sbjct: 77 KQIAPALLLRLNQPPPQAISGQGFSFSPQGGGG 109
>10_03_0023 - 7151465-7152111,7152222-7152405
Length = 276
Score = 28.7 bits (61), Expect = 8.3
Identities = 22/84 (26%), Positives = 24/84 (28%), Gaps = 2/84 (2%)
Frame = +2
Query: 296 PPQXXTPGGFXLXPRGGXGGGXKKXXPP--PKKXXKKKXXXLXXLXXXNPFXXXPPPPPX 469
PP TP L P PP P+ + L NP PPPPP
Sbjct: 188 PPNPITPAPPSLVPPVFPTPSPPSILPPLTPQPPPSSLIPPVLPLPLLNP-PPPPPPPPS 246
Query: 470 XXXPXXXXXXXXPGAPXXKXGGGG 541
P PG P G
Sbjct: 247 LLPPVPLLPPLIPGVPPASASRSG 270
>01_07_0082 - 40965947-40967023
Length = 358
Score = 28.7 bits (61), Expect = 8.3
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +2
Query: 296 PPQXXTPGGFXLXPRGGXGGGXKKXXPPPKK 388
PPQ GG+ P+ G GG ++ P KK
Sbjct: 281 PPQAGYGGGYGYPPQAGYGGYQQQAVKPAKK 311
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,487,078
Number of Sequences: 37544
Number of extensions: 680507
Number of successful extensions: 2687
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1126
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2279
length of database: 14,793,348
effective HSP length: 83
effective length of database: 11,677,196
effective search space used: 3176197312
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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