Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP10_T7_L13
         (818 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_04_0081 - 14400293-14400397,14400953-14401036,14401144-144012...    29   3.4  
12_01_0033 - 272848-272943,274026-274169,274264-274375,274521-27...    29   4.4  
08_01_0539 + 4679392-4681282,4682060-4682104,4682403-4683560,468...    29   4.4  
01_06_0581 - 30386018-30386440                                         29   4.4  
02_01_0458 + 3291563-3291733,3292082-3292769,3292847-3293363,329...    28   7.8  

>09_04_0081 -
           14400293-14400397,14400953-14401036,14401144-14401214,
           14401293-14401380,14401487-14401678,14401772-14402704
          Length = 490

 Score = 29.5 bits (63), Expect = 3.4
 Identities = 15/46 (32%), Positives = 15/46 (32%)
 Frame = +3

Query: 582 RLARXPVVPGAXSPKXHSXXIXPPXXPPXPXSLGPXPXLXKNXXXP 719
           R    P  PG   P  H     PP  PP P    P P   K    P
Sbjct: 128 RAQALPRGPGQEPPPPHVPKAAPPPPPPPPPHAPPGPPPTKGVATP 173


>12_01_0033 -
           272848-272943,274026-274169,274264-274375,274521-274702,
           274781-274912,275038-276330,279841-280545,280649-280695,
           280787-280865
          Length = 929

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 16/49 (32%), Positives = 19/49 (38%)
 Frame = +3

Query: 582 RLARXPVVPGAXSPKXHSXXIXPPXXPPXPXSLGPXPXLXKNXXXPXPP 728
           R  R P  P A S   ++    PP  P  P +  P P   K    P PP
Sbjct: 592 RAPRVPRPPPAPSATANTASALPPPPPRPPGAPPPPPPPGKPGGPPPPP 640


>08_01_0539 +
           4679392-4681282,4682060-4682104,4682403-4683560,
           4683834-4684204,4684290-4684835,4684927-4685027,
           4685117-4685933,4686025-4686213,4686313-4686384,
           4686477-4686587,4686647-4686652,4686694-4686794,
           4687714-4687813,4687891-4687986,4688157-4688273,
           4688367-4688492,4688566-4688619,4688745-4688992,
           4689087-4689195,4689284-4689583,4689799-4689963
          Length = 2240

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 12/27 (44%), Positives = 12/27 (44%)
 Frame = +3

Query: 648 PPXXPPXPXSLGPXPXLXKNXXXPXPP 728
           PP  PP P    P P L  N   P PP
Sbjct: 428 PPLPPPPPPPPPPPPPLPPNMPPPLPP 454


>01_06_0581 - 30386018-30386440
          Length = 140

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 12/25 (48%), Positives = 17/25 (68%)
 Frame = +1

Query: 271 SGVRSQVLERLEMRLRSGGGGARRQ 345
           SG+  +V +R+E   R GGGG RR+
Sbjct: 31  SGIEVKVRKRVEKEARMGGGGRRRR 55


>02_01_0458 +
           3291563-3291733,3292082-3292769,3292847-3293363,
           3293438-3293637,3294137-3294372,3294469-3295302
          Length = 881

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 11/27 (40%), Positives = 12/27 (44%)
 Frame = +3

Query: 648 PPXXPPXPXSLGPXPXLXKNXXXPXPP 728
           PP  PP P    P P + K    P PP
Sbjct: 364 PPPPPPPPRPPPPPPPIKKGAPPPAPP 390


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,343,763
Number of Sequences: 37544
Number of extensions: 202207
Number of successful extensions: 844
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 705
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 814
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2244686244
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)