Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP10_T7_L13
         (818 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U58751-5|AAN84882.1|  781|Caenorhabditis elegans Wasp (actin cyt...    33   0.32 
U58751-4|AAN84881.1|  607|Caenorhabditis elegans Wasp (actin cyt...    33   0.32 
AF040642-7|AAB94952.1|  329|Caenorhabditis elegans Collagen prot...    28   9.2  

>U58751-5|AAN84882.1|  781|Caenorhabditis elegans Wasp (actin
           cytoskeleton modulator)homolog protein 1, isoform b
           protein.
          Length = 781

 Score = 32.7 bits (71), Expect = 0.32
 Identities = 14/44 (31%), Positives = 17/44 (38%)
 Frame = +3

Query: 597 PVVPGAXSPKXHSXXIXPPXXPPXPXSLGPXPXLXKNXXXPXPP 728
           P  P   +P+     + PP  PP P S G  P        P PP
Sbjct: 593 PQAPNYGTPENRPHAVPPPPPPPPPQSFGMAPISSAAPPPPPPP 636


>U58751-4|AAN84881.1|  607|Caenorhabditis elegans Wasp (actin
           cytoskeleton modulator)homolog protein 1, isoform a
           protein.
          Length = 607

 Score = 32.7 bits (71), Expect = 0.32
 Identities = 14/44 (31%), Positives = 17/44 (38%)
 Frame = +3

Query: 597 PVVPGAXSPKXHSXXIXPPXXPPXPXSLGPXPXLXKNXXXPXPP 728
           P  P   +P+     + PP  PP P S G  P        P PP
Sbjct: 419 PQAPNYGTPENRPHAVPPPPPPPPPQSFGMAPISSAAPPPPPPP 462


>AF040642-7|AAB94952.1|  329|Caenorhabditis elegans Collagen protein
           68 protein.
          Length = 329

 Score = 27.9 bits (59), Expect = 9.2
 Identities = 13/38 (34%), Positives = 15/38 (39%)
 Frame = +3

Query: 579 GRLARXPVVPGAXSPKXHSXXIXPPXXPPXPXSLGPXP 692
           G++   P  PG   P      I PP  P  P S  P P
Sbjct: 246 GQVIEVPGTPGPAGPPGPPGPIGPPGQPGAPGSSQPGP 283


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,959,993
Number of Sequences: 27780
Number of extensions: 121310
Number of successful extensions: 360
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 316
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 349
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2019417216
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)