Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP10_T7_L10
         (966 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF051782-1|AAC05373.1| 1248|Homo sapiens diaphanous 1 protein.         25   4.4  
AL158217-11|CAI22163.1|  854|Homo sapiens espin protein.               26   7.7  
AL031848-3|CAI19773.1|  854|Homo sapiens espin protein.                26   7.7  
AK127078-1|BAC86815.1|  844|Homo sapiens protein ( Homo sapiens ...    31   8.3  

>AF051782-1|AAC05373.1| 1248|Homo sapiens diaphanous 1 protein.
          Length = 1248

 Score = 25.4 bits (53), Expect(2) = 4.4
 Identities = 18/69 (26%), Positives = 20/69 (28%), Gaps = 6/69 (8%)
 Frame = -3

Query: 661 PXPPPPPPXXXXXXXXXXXXXFFFXXXXXXXXPPXXXXXXXXNP---XXXXXXPPP---P 500
           P PPPPPP                        PP        +P         PPP   P
Sbjct: 602 PPPPPPPPPPLPGGTAISPPPPLSGDATIPPPPPLPEGVGIPSPSSLPGGTAIPPPPPLP 661

Query: 499 XXKKXPPPP 473
              + PPPP
Sbjct: 662 GSARIPPPP 670



 Score = 24.6 bits (51), Expect(2) = 4.4
 Identities = 8/13 (61%), Positives = 8/13 (61%)
 Frame = -3

Query: 676 GGGXXPXPPPPPP 638
           G    P PPPPPP
Sbjct: 594 GDSTTPPPPPPPP 606


>AL158217-11|CAI22163.1|  854|Homo sapiens espin protein.
          Length = 854

 Score = 25.8 bits (54), Expect(2) = 7.7
 Identities = 9/20 (45%), Positives = 10/20 (50%)
 Frame = -3

Query: 532 PXXXXXXPPPPXXKKXPPPP 473
           P      PPPP   + PPPP
Sbjct: 433 PPPSFPPPPPPPGTQLPPPP 452



 Score = 23.4 bits (48), Expect(2) = 7.7
 Identities = 7/8 (87%), Positives = 7/8 (87%)
 Frame = -3

Query: 661 PXPPPPPP 638
           P PPPPPP
Sbjct: 428 PTPPPPPP 435


>AL031848-3|CAI19773.1|  854|Homo sapiens espin protein.
          Length = 854

 Score = 25.8 bits (54), Expect(2) = 7.7
 Identities = 9/20 (45%), Positives = 10/20 (50%)
 Frame = -3

Query: 532 PXXXXXXPPPPXXKKXPPPP 473
           P      PPPP   + PPPP
Sbjct: 433 PPPSFPPPPPPPGTQLPPPP 452



 Score = 23.4 bits (48), Expect(2) = 7.7
 Identities = 7/8 (87%), Positives = 7/8 (87%)
 Frame = -3

Query: 661 PXPPPPPP 638
           P PPPPPP
Sbjct: 428 PTPPPPPP 435


>AK127078-1|BAC86815.1|  844|Homo sapiens protein ( Homo sapiens
           cDNA FLJ45135 fis, clone BRAWH3038252, highly  similar
           to Formin 1 isoform IV. ).
          Length = 844

 Score = 30.7 bits (66), Expect = 8.3
 Identities = 19/66 (28%), Positives = 19/66 (28%)
 Frame = -3

Query: 673 GGXXPXPPPPPPXXXXXXXXXXXXXFFFXXXXXXXXPPXXXXXXXXNPXXXXXXPPPPXX 494
           G   P PPPPPP                        PP        NP      PPPP  
Sbjct: 325 GPPLPPPPPPPPPLPPPSSA--------GPPPPPPPPPLPNSPAPPNPGGPPPAPPPPGL 376

Query: 493 KKXPPP 476
              PPP
Sbjct: 377 APPPPP 382


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 105,912,063
Number of Sequences: 237096
Number of extensions: 2291615
Number of successful extensions: 57490
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 4713
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27944
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 12825217482
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)