Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP10_T7_L10
         (966 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U53153-1|AAC69039.4|  715|Caenorhabditis elegans Hypothetical pr...    26   3.3  
Z77662-15|CAI79240.1|  255|Caenorhabditis elegans Hypothetical p...    29   5.0  
AL132860-5|CAB60515.1|  798|Caenorhabditis elegans Hypothetical ...    24   5.5  
Z81088-5|CAB03133.1|  215|Caenorhabditis elegans Hypothetical pr...    29   6.5  
Z81088-4|CAB03125.1|  105|Caenorhabditis elegans Hypothetical pr...    29   6.5  
X74838-1|CAA52832.1|  231|Caenorhabditis elegans cuticlin 2 prot...    29   6.5  
U55366-2|AAA97981.1|  156|Caenorhabditis elegans Hypothetical pr...    29   6.5  
AF016446-2|AAC24165.1|   70|Caenorhabditis elegans Hypothetical ...    29   6.5  
AF016446-1|AAC24166.1|   66|Caenorhabditis elegans Hypothetical ...    29   6.5  
AC024809-7|AAF59540.1|  315|Caenorhabditis elegans Hypothetical ...    29   6.5  
Z81540-5|CAB04405.2|  946|Caenorhabditis elegans Hypothetical pr...    28   8.7  
Z81053-1|CAB02877.1|  385|Caenorhabditis elegans Hypothetical pr...    28   8.7  
AL117204-20|CAB55136.2|  699|Caenorhabditis elegans Hypothetical...    28   8.7  
AJ243905-1|CAB64866.1|  699|Caenorhabditis elegans SF1 protein p...    28   8.7  
AF038615-6|AAB94146.1|  157|Caenorhabditis elegans Ground-like (...    28   8.7  
AC024790-13|AAL32247.1|  311|Caenorhabditis elegans Hypothetical...    28   8.7  

>U53153-1|AAC69039.4|  715|Caenorhabditis elegans Hypothetical
           protein T19A5.3a protein.
          Length = 715

 Score = 25.8 bits (54), Expect(2) = 3.3
 Identities = 11/21 (52%), Positives = 11/21 (52%)
 Frame = +3

Query: 474 GGGGXFFXXGGGGXXXXXXGF 536
           GGGG  F  GGGG      GF
Sbjct: 483 GGGGGGFGGGGGGFGGGGGGF 503



 Score = 22.2 bits (45), Expect(2) = 3.3
 Identities = 8/12 (66%), Positives = 8/12 (66%)
 Frame = +3

Query: 639 GGGGGGXGXXPP 674
           GGGGGG G   P
Sbjct: 497 GGGGGGFGSGSP 508


>Z77662-15|CAI79240.1|  255|Caenorhabditis elegans Hypothetical
           protein F47B8.14 protein.
          Length = 255

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 10/14 (71%), Positives = 10/14 (71%)
 Frame = -3

Query: 679 GGGGXXPXPPPPPP 638
           GGGG    PPPPPP
Sbjct: 33  GGGGGDAAPPPPPP 46



 Score = 28.7 bits (61), Expect = 6.5
 Identities = 10/14 (71%), Positives = 10/14 (71%)
 Frame = +3

Query: 639 GGGGGGXGXXPPPP 680
           GGGGGG    PPPP
Sbjct: 32  GGGGGGDAAPPPPP 45



 Score = 28.3 bits (60), Expect = 8.7
 Identities = 10/14 (71%), Positives = 10/14 (71%)
 Frame = +2

Query: 638 GGGXGGGXXXPPPP 679
           GGG GGG   PPPP
Sbjct: 31  GGGGGGGDAAPPPP 44


>AL132860-5|CAB60515.1|  798|Caenorhabditis elegans Hypothetical
           protein Y56A3A.6 protein.
          Length = 798

 Score = 23.8 bits (49), Expect(2) = 5.5
 Identities = 7/7 (100%), Positives = 7/7 (100%)
 Frame = -2

Query: 965 PPPPPPP 945
           PPPPPPP
Sbjct: 134 PPPPPPP 140



 Score = 23.4 bits (48), Expect(2) = 5.5
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = -2

Query: 962 PPPPPPXKK 936
           PPPPPP +K
Sbjct: 180 PPPPPPHRK 188


>Z81088-5|CAB03133.1|  215|Caenorhabditis elegans Hypothetical
           protein F53F1.5 protein.
          Length = 215

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 10/13 (76%), Positives = 10/13 (76%)
 Frame = +3

Query: 642 GGGGGXGXXPPPP 680
           GGGGG G  PPPP
Sbjct: 22  GGGGGCGCAPPPP 34



 Score = 28.3 bits (60), Expect = 8.7
 Identities = 10/14 (71%), Positives = 10/14 (71%)
 Frame = -3

Query: 679 GGGGXXPXPPPPPP 638
           GGGG    PPPPPP
Sbjct: 23  GGGGCGCAPPPPPP 36


>Z81088-4|CAB03125.1|  105|Caenorhabditis elegans Hypothetical
           protein F53F1.4 protein.
          Length = 105

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 10/13 (76%), Positives = 10/13 (76%)
 Frame = +3

Query: 642 GGGGGXGXXPPPP 680
           GGGGG G  PPPP
Sbjct: 22  GGGGGCGCAPPPP 34



 Score = 28.3 bits (60), Expect = 8.7
 Identities = 10/14 (71%), Positives = 10/14 (71%)
 Frame = -3

Query: 679 GGGGXXPXPPPPPP 638
           GGGG    PPPPPP
Sbjct: 23  GGGGCGCAPPPPPP 36


>X74838-1|CAA52832.1|  231|Caenorhabditis elegans cuticlin 2
           protein.
          Length = 231

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 10/13 (76%), Positives = 10/13 (76%)
 Frame = +3

Query: 642 GGGGGXGXXPPPP 680
           GGGGG G  PPPP
Sbjct: 22  GGGGGCGCAPPPP 34



 Score = 28.3 bits (60), Expect = 8.7
 Identities = 10/14 (71%), Positives = 10/14 (71%)
 Frame = -3

Query: 679 GGGGXXPXPPPPPP 638
           GGGG    PPPPPP
Sbjct: 23  GGGGCGCAPPPPPP 36


>U55366-2|AAA97981.1|  156|Caenorhabditis elegans Hypothetical
           protein F41F3.3 protein.
          Length = 156

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 10/13 (76%), Positives = 10/13 (76%)
 Frame = +3

Query: 642 GGGGGXGXXPPPP 680
           GGGGG G  PPPP
Sbjct: 22  GGGGGCGCAPPPP 34



 Score = 28.3 bits (60), Expect = 8.7
 Identities = 10/14 (71%), Positives = 10/14 (71%)
 Frame = -3

Query: 679 GGGGXXPXPPPPPP 638
           GGGG    PPPPPP
Sbjct: 23  GGGGCGCAPPPPPP 36


>AF016446-2|AAC24165.1|   70|Caenorhabditis elegans Hypothetical
           protein C02E7.6 protein.
          Length = 70

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 10/13 (76%), Positives = 10/13 (76%)
 Frame = +3

Query: 642 GGGGGXGXXPPPP 680
           GGGGG G  PPPP
Sbjct: 22  GGGGGCGCAPPPP 34


>AF016446-1|AAC24166.1|   66|Caenorhabditis elegans Hypothetical
           protein C02E7.7 protein.
          Length = 66

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 10/13 (76%), Positives = 10/13 (76%)
 Frame = +3

Query: 642 GGGGGXGXXPPPP 680
           GGGGG G  PPPP
Sbjct: 22  GGGGGCGCAPPPP 34



 Score = 28.3 bits (60), Expect = 8.7
 Identities = 10/14 (71%), Positives = 10/14 (71%)
 Frame = -3

Query: 679 GGGGXXPXPPPPPP 638
           GGGG    PPPPPP
Sbjct: 23  GGGGCGCAPPPPPP 36


>AC024809-7|AAF59540.1|  315|Caenorhabditis elegans Hypothetical
           protein Y53G8AR.9 protein.
          Length = 315

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 10/14 (71%), Positives = 10/14 (71%)
 Frame = +3

Query: 639 GGGGGGXGXXPPPP 680
           GG GGG G  PPPP
Sbjct: 202 GGSGGGSGRFPPPP 215


>Z81540-5|CAB04405.2|  946|Caenorhabditis elegans Hypothetical
           protein F46B3.5 protein.
          Length = 946

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 11/19 (57%), Positives = 11/19 (57%)
 Frame = +1

Query: 910 PPPPXXXXXFXXGGGGGGG 966
           PPP      F  GGGGGGG
Sbjct: 723 PPPVAPAVAFAGGGGGGGG 741


>Z81053-1|CAB02877.1|  385|Caenorhabditis elegans Hypothetical
           protein E02A10.2 protein.
          Length = 385

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 10/14 (71%), Positives = 10/14 (71%)
 Frame = +2

Query: 638 GGGXGGGXXXPPPP 679
           GGG GGG   PPPP
Sbjct: 45  GGGCGGGCAPPPPP 58



 Score = 28.3 bits (60), Expect = 8.7
 Identities = 10/14 (71%), Positives = 10/14 (71%)
 Frame = +2

Query: 638 GGGXGGGXXXPPPP 679
           GGG GGG   PPPP
Sbjct: 102 GGGCGGGCAPPPPP 115


>AL117204-20|CAB55136.2|  699|Caenorhabditis elegans Hypothetical
           protein Y116A8C.32 protein.
          Length = 699

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 10/14 (71%), Positives = 10/14 (71%)
 Frame = -3

Query: 679 GGGGXXPXPPPPPP 638
           G GG  P PPPPPP
Sbjct: 668 GLGGFMPPPPPPPP 681


>AJ243905-1|CAB64866.1|  699|Caenorhabditis elegans SF1 protein
           protein.
          Length = 699

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 10/14 (71%), Positives = 10/14 (71%)
 Frame = -3

Query: 679 GGGGXXPXPPPPPP 638
           G GG  P PPPPPP
Sbjct: 668 GLGGFMPPPPPPPP 681


>AF038615-6|AAB94146.1|  157|Caenorhabditis elegans Ground-like (grd
           related) protein19 protein.
          Length = 157

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 10/14 (71%), Positives = 10/14 (71%)
 Frame = +2

Query: 638 GGGXGGGXXXPPPP 679
           GGG GGG   PPPP
Sbjct: 35  GGGGGGGCCAPPPP 48



 Score = 28.3 bits (60), Expect = 8.7
 Identities = 10/14 (71%), Positives = 10/14 (71%)
 Frame = -3

Query: 679 GGGGXXPXPPPPPP 638
           GGGG    PPPPPP
Sbjct: 37  GGGGGCCAPPPPPP 50


>AC024790-13|AAL32247.1|  311|Caenorhabditis elegans Hypothetical
           protein Y47D7A.13 protein.
          Length = 311

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 10/14 (71%), Positives = 10/14 (71%)
 Frame = -3

Query: 679 GGGGXXPXPPPPPP 638
           GGGG    PPPPPP
Sbjct: 23  GGGGGCCAPPPPPP 36


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,538,090
Number of Sequences: 27780
Number of extensions: 273947
Number of successful extensions: 8113
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 723
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3735
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2500474882
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)