Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP10_T7_L06
(979 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 35 0.10
U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (gr... 34 0.18
D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like prot... 33 0.23
AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a... 33 0.23
AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a... 33 0.23
AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a... 33 0.23
AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a... 33 0.23
U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical pr... 33 0.31
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 31 1.2
U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical pr... 29 1.6
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 30 2.9
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 30 2.9
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 30 2.9
AF125971-9|AAD14764.1| 442|Caenorhabditis elegans Hypothetical ... 25 3.5
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 29 3.8
Z77655-1|CAB01137.1| 393|Caenorhabditis elegans Hypothetical pr... 29 3.8
Z93393-1|CAB07688.1| 497|Caenorhabditis elegans Hypothetical pr... 29 5.0
Z82274-16|CAC70096.1| 1119|Caenorhabditis elegans Hypothetical p... 29 6.7
Z82274-15|CAB05234.2| 1113|Caenorhabditis elegans Hypothetical p... 29 6.7
U53153-1|AAC69039.4| 715|Caenorhabditis elegans Hypothetical pr... 29 6.7
U50310-5|AAA92541.1| 318|Caenorhabditis elegans Ground-like (gr... 29 6.7
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 29 6.7
U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical pr... 29 6.7
AL132951-13|CAC70127.1| 1119|Caenorhabditis elegans Hypothetical... 29 6.7
AL132951-12|CAC44311.1| 1113|Caenorhabditis elegans Hypothetical... 29 6.7
AL110490-7|CAD59175.1| 533|Caenorhabditis elegans Hypothetical ... 29 6.7
AL110490-6|CAB54442.2| 687|Caenorhabditis elegans Hypothetical ... 29 6.7
AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein. 29 6.7
AF283323-1|AAG18575.1| 1113|Caenorhabditis elegans synaptojanin ... 29 6.7
AF283322-1|AAG18574.1| 1119|Caenorhabditis elegans synaptojanin ... 29 6.7
AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical ... 29 6.7
AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated... 29 6.7
AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated... 29 6.7
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 28 8.8
U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hed... 28 8.8
L23648-8|AAA28030.1| 503|Caenorhabditis elegans Hypothetical pr... 28 8.8
AL132860-5|CAB60515.1| 798|Caenorhabditis elegans Hypothetical ... 28 8.8
AL110490-3|CAB54449.1| 892|Caenorhabditis elegans Hypothetical ... 28 8.8
AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical... 28 8.8
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 28 8.8
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 28 8.8
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 28 8.8
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 34.7 bits (76), Expect = 0.10
Identities = 16/44 (36%), Positives = 17/44 (38%)
Frame = +1
Query: 769 APPPPPXPXXPXXPXLLPSPXXPXLXPRXRXXXLXXXLXSXPPP 900
+PPPPP P P L P P P P L PPP
Sbjct: 1337 SPPPPPPPPPPPSDDLTPVPPPPPPPPTMSKAPTGVPLPVPPPP 1380
>U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (grd
related) protein 6 protein.
Length = 240
Score = 33.9 bits (74), Expect = 0.18
Identities = 13/34 (38%), Positives = 16/34 (47%)
Frame = +1
Query: 751 PPXXLXAPPPPPXPXXPXXPXLLPSPXXPXLXPR 852
PP + PPPPP P P +P P P + R
Sbjct: 66 PPPPICPPPPPPPMPCPPPPPPMPRPSCPCMMQR 99
Score = 29.5 bits (63), Expect = 3.8
Identities = 10/26 (38%), Positives = 13/26 (50%)
Frame = +1
Query: 751 PPXXLXAPPPPPXPXXPXXPXLLPSP 828
PP + PPPPP P P ++ P
Sbjct: 75 PPPPMPCPPPPPPMPRPSCPCMMQRP 100
>D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like protein
protein.
Length = 346
Score = 33.5 bits (73), Expect = 0.23
Identities = 17/42 (40%), Positives = 18/42 (42%)
Frame = -3
Query: 872 KXXXXRXRGXRXGXXGXGRRXGXXGXXGXGGGGGAXXXXGGP 747
K R R R G G+R G G G GGG G GGP
Sbjct: 197 KAQMNRDRETRGGRSRDGQRGGYNGGGGGGGGWGGPAQRGGP 238
>AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform b protein.
Length = 309
Score = 33.5 bits (73), Expect = 0.23
Identities = 17/42 (40%), Positives = 18/42 (42%)
Frame = -3
Query: 872 KXXXXRXRGXRXGXXGXGRRXGXXGXXGXGGGGGAXXXXGGP 747
K R R R G G+R G G G GGG G GGP
Sbjct: 159 KAQMNRDRETRGGRSRDGQRGGYNGGGGGGGGWGGPAQRGGP 200
>AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform c protein.
Length = 308
Score = 33.5 bits (73), Expect = 0.23
Identities = 17/42 (40%), Positives = 18/42 (42%)
Frame = -3
Query: 872 KXXXXRXRGXRXGXXGXGRRXGXXGXXGXGGGGGAXXXXGGP 747
K R R R G G+R G G G GGG G GGP
Sbjct: 159 KAQMNRDRETRGGRSRDGQRGGYNGGGGGGGGWGGPAQRGGP 200
>AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform d protein.
Length = 347
Score = 33.5 bits (73), Expect = 0.23
Identities = 17/42 (40%), Positives = 18/42 (42%)
Frame = -3
Query: 872 KXXXXRXRGXRXGXXGXGRRXGXXGXXGXGGGGGAXXXXGGP 747
K R R R G G+R G G G GGG G GGP
Sbjct: 197 KAQMNRDRETRGGRSRDGQRGGYNGGGGGGGGWGGPAQRGGP 238
>AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform a protein.
Length = 346
Score = 33.5 bits (73), Expect = 0.23
Identities = 17/42 (40%), Positives = 18/42 (42%)
Frame = -3
Query: 872 KXXXXRXRGXRXGXXGXGRRXGXXGXXGXGGGGGAXXXXGGP 747
K R R R G G+R G G G GGG G GGP
Sbjct: 197 KAQMNRDRETRGGRSRDGQRGGYNGGGGGGGGWGGPAQRGGP 238
>U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical
protein C34D4.11 protein.
Length = 136
Score = 33.1 bits (72), Expect = 0.31
Identities = 18/50 (36%), Positives = 19/50 (38%)
Frame = -3
Query: 899 GGGXDXRXXKXXXXRXRGXRXGXXGXGRRXGXXGXXGXGGGGGAXXXXGG 750
GGG + G G G G R G G G GGGGG GG
Sbjct: 76 GGGGNWGGNGGGGNGGGGRGGGGGGGGGRGGGGGGRGGGGGGGGGRGGGG 125
Score = 31.5 bits (68), Expect = 0.94
Identities = 14/29 (48%), Positives = 14/29 (48%)
Frame = -3
Query: 836 GXXGXGRRXGXXGXXGXGGGGGAXXXXGG 750
G G GR G G G GGGGG GG
Sbjct: 98 GGGGGGRGGGGGGRGGGGGGGGGRGGGGG 126
Score = 31.1 bits (67), Expect = 1.2
Identities = 18/49 (36%), Positives = 20/49 (40%)
Frame = -3
Query: 899 GGGXDXRXXKXXXXRXRGXRXGXXGXGRRXGXXGXXGXGGGGGAXXXXG 753
GGG + + G R G G GR G G G GGGGG G
Sbjct: 85 GGGGNGGGGRGGGGGGGGGRGGGGG-GRGGGGGGGGGRGGGGGGRGGGG 132
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 31.1 bits (67), Expect = 1.2
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = +1
Query: 751 PPXXLXAPPPPPXPXXPXXPXLLPS 825
PP PPPPP P P P +PS
Sbjct: 59 PPMCPPPPPPPPPPMCPPPPPPMPS 83
Score = 29.1 bits (62), Expect = 5.0
Identities = 14/35 (40%), Positives = 15/35 (42%), Gaps = 2/35 (5%)
Frame = +1
Query: 751 PPXXLXAPPPPPXPXXPXXPXLL--PSPXXPXLXP 849
PP + APPP P P P P P P P P
Sbjct: 33 PPPPMCAPPPLPCPPPPICPPQFCPPPPMCPPPPP 67
Score = 28.7 bits (61), Expect = 6.7
Identities = 13/33 (39%), Positives = 14/33 (42%)
Frame = +1
Query: 751 PPXXLXAPPPPPXPXXPXXPXLLPSPXXPXLXP 849
PP + PPPPP P P P P P P
Sbjct: 57 PPPPMCPPPPPPPPPPMCPP---PPPPMPSYSP 86
>U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical
protein R144.4a protein.
Length = 360
Score = 28.7 bits (61), Expect(2) = 1.6
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = +1
Query: 769 APPPPPXPXXPXXPXLLPSPXXP 837
APPPPP P P P+P P
Sbjct: 154 APPPPPPPPPVSVPSSKPTPPPP 176
Score = 20.6 bits (41), Expect(2) = 1.6
Identities = 7/15 (46%), Positives = 8/15 (53%)
Frame = +1
Query: 748 GPPXXLXAPPPPPXP 792
GPP + PP P P
Sbjct: 112 GPPPTASSAPPVPPP 126
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 29.9 bits (64), Expect = 2.9
Identities = 14/31 (45%), Positives = 14/31 (45%), Gaps = 2/31 (6%)
Frame = -2
Query: 546 PPPPPXPGGXCXFXKKKXXXXG--GGXXPPP 460
PPPPP P G C G GG PPP
Sbjct: 758 PPPPPPPPGGCPPPPPPPPPGGFKGGPPPPP 788
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 29.9 bits (64), Expect = 2.9
Identities = 14/31 (45%), Positives = 14/31 (45%), Gaps = 2/31 (6%)
Frame = -2
Query: 546 PPPPPXPGGXCXFXKKKXXXXG--GGXXPPP 460
PPPPP P G C G GG PPP
Sbjct: 758 PPPPPPPPGGCPPPPPPPPPGGFKGGPPPPP 788
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 29.9 bits (64), Expect = 2.9
Identities = 14/31 (45%), Positives = 14/31 (45%), Gaps = 2/31 (6%)
Frame = -2
Query: 546 PPPPPXPGGXCXFXKKKXXXXG--GGXXPPP 460
PPPPP P G C G GG PPP
Sbjct: 341 PPPPPPPPGGCPPPPPPPPPGGFKGGPPPPP 371
>AF125971-9|AAD14764.1| 442|Caenorhabditis elegans Hypothetical
protein Y4C6B.1 protein.
Length = 442
Score = 25.4 bits (53), Expect(2) = 3.5
Identities = 9/18 (50%), Positives = 10/18 (55%)
Frame = +1
Query: 769 APPPPPXPXXPXXPXLLP 822
APPPPP P P +P
Sbjct: 314 APPPPPPPPLPKMSQKIP 331
Score = 22.6 bits (46), Expect(2) = 3.5
Identities = 7/13 (53%), Positives = 8/13 (61%)
Frame = +1
Query: 754 PXXLXAPPPPPXP 792
P + PPPPP P
Sbjct: 310 PMCMAPPPPPPPP 322
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 29.5 bits (63), Expect = 3.8
Identities = 14/33 (42%), Positives = 14/33 (42%)
Frame = -3
Query: 848 GXRXGXXGXGRRXGXXGXXGXGGGGGAXXXXGG 750
G G G G G G G GGGGG GG
Sbjct: 121 GCGGGGGGCGGGCGGGGGGGCGGGGGGGCGGGG 153
Score = 29.1 bits (62), Expect = 5.0
Identities = 14/33 (42%), Positives = 14/33 (42%)
Frame = -3
Query: 848 GXRXGXXGXGRRXGXXGXXGXGGGGGAXXXXGG 750
G G G G G G G GGGGG GG
Sbjct: 123 GGGGGGCGGGCGGGGGGGCGGGGGGGCGGGGGG 155
>Z77655-1|CAB01137.1| 393|Caenorhabditis elegans Hypothetical
protein C56A3.1 protein.
Length = 393
Score = 29.5 bits (63), Expect = 3.8
Identities = 14/33 (42%), Positives = 14/33 (42%)
Frame = -3
Query: 848 GXRXGXXGXGRRXGXXGXXGXGGGGGAXXXXGG 750
G G G G G G G GGGGG GG
Sbjct: 96 GGGGGGCGGGGGCGGGGGGGCGGGGGGGCGGGG 128
Score = 28.7 bits (61), Expect = 6.7
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = -3
Query: 836 GXXGXGRRXGXXGXXGXGGGGGAXXXXGG 750
G G G G G G GGGGG GG
Sbjct: 94 GCGGGGGGCGGGGGCGGGGGGGCGGGGGG 122
>Z93393-1|CAB07688.1| 497|Caenorhabditis elegans Hypothetical
protein Y48E1B.1 protein.
Length = 497
Score = 29.1 bits (62), Expect = 5.0
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +1
Query: 769 APPPPPXPXXPXXPXLLPS 825
APPPPP P P P PS
Sbjct: 356 APPPPPPPPPPPPPPQTPS 374
>Z82274-16|CAC70096.1| 1119|Caenorhabditis elegans Hypothetical
protein JC8.10b protein.
Length = 1119
Score = 28.7 bits (61), Expect = 6.7
Identities = 14/32 (43%), Positives = 14/32 (43%), Gaps = 2/32 (6%)
Frame = +1
Query: 721 PXXXXSXXXGPPXX--LXAPPPPPXPXXPXXP 810
P S GPP APPPPP P P P
Sbjct: 1085 PTRGASVGPGPPAVPVRKAPPPPPRPVIPPRP 1116
>Z82274-15|CAB05234.2| 1113|Caenorhabditis elegans Hypothetical
protein JC8.10a protein.
Length = 1113
Score = 28.7 bits (61), Expect = 6.7
Identities = 14/32 (43%), Positives = 14/32 (43%), Gaps = 2/32 (6%)
Frame = +1
Query: 721 PXXXXSXXXGPPXX--LXAPPPPPXPXXPXXP 810
P S GPP APPPPP P P P
Sbjct: 1079 PTRGASVGPGPPAVPVRKAPPPPPRPVIPPRP 1110
>U53153-1|AAC69039.4| 715|Caenorhabditis elegans Hypothetical
protein T19A5.3a protein.
Length = 715
Score = 28.7 bits (61), Expect = 6.7
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = -3
Query: 836 GXXGXGRRXGXXGXXGXGGGGGAXXXXGG 750
G G G G G G GGGGG GG
Sbjct: 473 GAGGFGSFGGGGGGGGFGGGGGGFGGGGG 501
>U50310-5|AAA92541.1| 318|Caenorhabditis elegans Ground-like (grd
related) protein 9 protein.
Length = 318
Score = 28.7 bits (61), Expect = 6.7
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = +1
Query: 754 PXXLXAPPPPPXPXXPXXP 810
P + APPPPP P P P
Sbjct: 128 PQYIEAPPPPPSPPPPPPP 146
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 28.7 bits (61), Expect = 6.7
Identities = 12/28 (42%), Positives = 14/28 (50%), Gaps = 1/28 (3%)
Frame = +1
Query: 769 APPPPPXPXXP-XXPXLLPSPXXPXLXP 849
+PPPPP P P P P P P + P
Sbjct: 137 SPPPPPPPRVPRTPPPRSPPPRRPPMTP 164
>U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical
protein R144.4b protein.
Length = 362
Score = 28.7 bits (61), Expect = 6.7
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = +1
Query: 769 APPPPPXPXXPXXPXLLPSPXXP 837
APPPPP P P P+P P
Sbjct: 154 APPPPPPPPPVSVPSSKPTPPPP 176
>AL132951-13|CAC70127.1| 1119|Caenorhabditis elegans Hypothetical
protein JC8.10b protein.
Length = 1119
Score = 28.7 bits (61), Expect = 6.7
Identities = 14/32 (43%), Positives = 14/32 (43%), Gaps = 2/32 (6%)
Frame = +1
Query: 721 PXXXXSXXXGPPXX--LXAPPPPPXPXXPXXP 810
P S GPP APPPPP P P P
Sbjct: 1085 PTRGASVGPGPPAVPVRKAPPPPPRPVIPPRP 1116
>AL132951-12|CAC44311.1| 1113|Caenorhabditis elegans Hypothetical
protein JC8.10a protein.
Length = 1113
Score = 28.7 bits (61), Expect = 6.7
Identities = 14/32 (43%), Positives = 14/32 (43%), Gaps = 2/32 (6%)
Frame = +1
Query: 721 PXXXXSXXXGPPXX--LXAPPPPPXPXXPXXP 810
P S GPP APPPPP P P P
Sbjct: 1079 PTRGASVGPGPPAVPVRKAPPPPPRPVIPPRP 1110
>AL110490-7|CAD59175.1| 533|Caenorhabditis elegans Hypothetical
protein Y48B6A.6b protein.
Length = 533
Score = 28.7 bits (61), Expect = 6.7
Identities = 12/29 (41%), Positives = 13/29 (44%)
Frame = +1
Query: 751 PPXXLXAPPPPPXPXXPXXPXLLPSPXXP 837
PP PPPPP P P + SP P
Sbjct: 257 PPVLSIPPPPPPNIPLPTIPQEVQSPPSP 285
>AL110490-6|CAB54442.2| 687|Caenorhabditis elegans Hypothetical
protein Y48B6A.6a protein.
Length = 687
Score = 28.7 bits (61), Expect = 6.7
Identities = 12/29 (41%), Positives = 13/29 (44%)
Frame = +1
Query: 751 PPXXLXAPPPPPXPXXPXXPXLLPSPXXP 837
PP PPPPP P P + SP P
Sbjct: 257 PPVLSIPPPPPPNIPLPTIPQEVQSPPSP 285
>AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein.
Length = 468
Score = 28.7 bits (61), Expect = 6.7
Identities = 14/31 (45%), Positives = 15/31 (48%)
Frame = +1
Query: 751 PPXXLXAPPPPPXPXXPXXPXLLPSPXXPXL 843
PP APPPPP P P L+ S P L
Sbjct: 240 PPVGAGAPPPPPPP--PPPAQLMASSGTPSL 268
>AF283323-1|AAG18575.1| 1113|Caenorhabditis elegans synaptojanin
UNC-26B protein.
Length = 1113
Score = 28.7 bits (61), Expect = 6.7
Identities = 14/32 (43%), Positives = 14/32 (43%), Gaps = 2/32 (6%)
Frame = +1
Query: 721 PXXXXSXXXGPPXX--LXAPPPPPXPXXPXXP 810
P S GPP APPPPP P P P
Sbjct: 1079 PTRGASVGPGPPAVPVRKAPPPPPRPVIPPRP 1110
>AF283322-1|AAG18574.1| 1119|Caenorhabditis elegans synaptojanin
UNC-26A protein.
Length = 1119
Score = 28.7 bits (61), Expect = 6.7
Identities = 14/32 (43%), Positives = 14/32 (43%), Gaps = 2/32 (6%)
Frame = +1
Query: 721 PXXXXSXXXGPPXX--LXAPPPPPXPXXPXXP 810
P S GPP APPPPP P P P
Sbjct: 1085 PTRGASVGPGPPAVPVRKAPPPPPRPVIPPRP 1116
>AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical
protein T20B6.3 protein.
Length = 259
Score = 28.7 bits (61), Expect = 6.7
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = -3
Query: 836 GXXGXGRRXGXXGXXGXGGGGGAXXXXGG 750
G G G G G G GGGGG GG
Sbjct: 136 GYGGMGGGPGGYGMGGYGGGGGGGGDFGG 164
>AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated
protein 34, isoform b protein.
Length = 310
Score = 28.7 bits (61), Expect = 6.7
Identities = 14/31 (45%), Positives = 15/31 (48%)
Frame = +1
Query: 751 PPXXLXAPPPPPXPXXPXXPXLLPSPXXPXL 843
PP APPPPP P P L+ S P L
Sbjct: 226 PPVGAGAPPPPPPP--PPPAQLMASSGTPSL 254
>AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated
protein 34, isoform a protein.
Length = 454
Score = 28.7 bits (61), Expect = 6.7
Identities = 14/31 (45%), Positives = 15/31 (48%)
Frame = +1
Query: 751 PPXXLXAPPPPPXPXXPXXPXLLPSPXXPXL 843
PP APPPPP P P L+ S P L
Sbjct: 226 PPVGAGAPPPPPPP--PPPAQLMASSGTPSL 254
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 28.3 bits (60), Expect = 8.8
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = +1
Query: 751 PPXXLXAPPPPPXPXXPXXPXLLPSPXXP 837
PP APPPPP P P P P
Sbjct: 107 PPPMFGAPPPPPPPSGLGVAPQPPRPKTP 135
>U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 7 protein.
Length = 401
Score = 28.3 bits (60), Expect = 8.8
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +1
Query: 754 PXXLXAPPPPPXPXXPXXPXLLPSP 828
P PPPPP P P P P P
Sbjct: 127 PYQQQPPPPPPPPHYPPPPPHYPPP 151
>L23648-8|AAA28030.1| 503|Caenorhabditis elegans Hypothetical
protein F44B9.2 protein.
Length = 503
Score = 28.3 bits (60), Expect = 8.8
Identities = 11/29 (37%), Positives = 13/29 (44%)
Frame = +1
Query: 736 SXXXGPPXXLXAPPPPPXPXXPXXPXLLP 822
S GPP + PPP P P P + P
Sbjct: 53 SVSNGPPEVTISAPPPTPPAAPLAPQITP 81
>AL132860-5|CAB60515.1| 798|Caenorhabditis elegans Hypothetical
protein Y56A3A.6 protein.
Length = 798
Score = 28.3 bits (60), Expect = 8.8
Identities = 17/50 (34%), Positives = 19/50 (38%), Gaps = 6/50 (12%)
Frame = +1
Query: 769 APPPPPXP----XXPXXPXLLPSP--XXPXLXPRXRXXXLXXXLXSXPPP 900
APPPPP P P P P+P P P R + PPP
Sbjct: 133 APPPPPPPAAAAAAPISPKAAPTPQSPAPNRVPHYRQTSTASVSSTIPPP 182
>AL110490-3|CAB54449.1| 892|Caenorhabditis elegans Hypothetical
protein Y48B6A.3 protein.
Length = 892
Score = 28.3 bits (60), Expect = 8.8
Identities = 14/42 (33%), Positives = 18/42 (42%)
Frame = -3
Query: 896 GGXDXRXXKXXXXRXRGXRXGXXGXGRRXGXXGXXGXGGGGG 771
GG D + + + + G G G G G G GGGGG
Sbjct: 805 GGRDGGGPQRYHDQQQQRQGGYQGGGYGGGYGGGGGGGGGGG 846
>AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical
protein Y43F8C.20 protein.
Length = 193
Score = 28.3 bits (60), Expect = 8.8
Identities = 17/44 (38%), Positives = 18/44 (40%)
Frame = -3
Query: 899 GGGXDXRXXKXXXXRXRGXRXGXXGXGRRXGXXGXXGXGGGGGA 768
GGG + G G G G R G G G GGGGGA
Sbjct: 137 GGGGRGGDGRGPPGSNGGGDWGGNGGGGRGGGGGRGG-GGGGGA 179
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 28.3 bits (60), Expect = 8.8
Identities = 11/26 (42%), Positives = 12/26 (46%)
Frame = +1
Query: 751 PPXXLXAPPPPPXPXXPXXPXLLPSP 828
PP +PPPPP P LP P
Sbjct: 290 PPPRAGSPPPPPPPRGSPPTGSLPPP 315
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 28.3 bits (60), Expect = 8.8
Identities = 11/26 (42%), Positives = 12/26 (46%)
Frame = +1
Query: 751 PPXXLXAPPPPPXPXXPXXPXLLPSP 828
PP +PPPPP P LP P
Sbjct: 311 PPPRAGSPPPPPPPRGSPPTGSLPPP 336
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 28.3 bits (60), Expect = 8.8
Identities = 11/26 (42%), Positives = 12/26 (46%)
Frame = +1
Query: 751 PPXXLXAPPPPPXPXXPXXPXLLPSP 828
PP +PPPPP P LP P
Sbjct: 296 PPPRAGSPPPPPPPRGSPPTGSLPPP 321
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,576,006
Number of Sequences: 27780
Number of extensions: 258368
Number of successful extensions: 3403
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 819
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2721
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2542323834
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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