Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP10_T7_L01
(804 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_03_0410 - 15569740-15570213 34 0.15
01_07_0213 - 42028941-42029055,42029444-42029480,42029876-420302... 31 1.1
06_01_1095 + 8984363-8984789,8985175-8985416,8985500-8985622,898... 30 2.5
01_06_0381 + 28878811-28879120,28880189-28880331,28880753-288815... 29 3.3
12_02_1120 - 26228618-26229403 29 4.3
11_05_0086 + 18964493-18965737,18965896-18966360 29 4.3
02_03_0287 + 17320242-17320481,17323422-17324767,17325124-17325142 29 4.3
12_01_1096 + 11494100-11494263,11494489-11494633,11494694-11494741 29 5.7
01_06_1731 + 39516897-39517632,39517744-39517912,39517985-395184... 29 5.7
05_04_0389 - 20845490-20845600,20845697-20846006,20846097-208462... 28 7.6
12_02_1174 - 26696869-26698191 28 10.0
11_01_0044 + 340486-340854,341855-341911,343100-343974,344065-34... 28 10.0
09_06_0239 - 21794691-21795986 28 10.0
08_01_0371 - 3284103-3284582 28 10.0
01_02_0098 - 11087875-11089110,11091744-11092022 28 10.0
>04_03_0410 - 15569740-15570213
Length = 157
Score = 33.9 bits (74), Expect = 0.15
Identities = 21/61 (34%), Positives = 24/61 (39%)
Frame = +1
Query: 178 RGGSNIGSPCWRRDLVVWRTRRPASVQSRRSARFSRTGWAATAEVSPPATCADSQDILPP 357
RGG C L W +R V RR R S GW + E P +T D PP
Sbjct: 21 RGGGGEQIQCLLLPLHRWWQQRRGMVALRRLRRCSG-GWGCSGEADPASTGLGRADPTPP 79
Query: 358 C 360
C
Sbjct: 80 C 80
>01_07_0213 -
42028941-42029055,42029444-42029480,42029876-42030244,
42030332-42031201,42051574-42052891
Length = 902
Score = 31.1 bits (67), Expect = 1.1
Identities = 25/72 (34%), Positives = 34/72 (47%)
Frame = +1
Query: 259 SRRSARFSRTGWAATAEVSPPATCADSQDILPPCKLLTATNLTSHHANYNFTGSTSLTRC 438
+RR R TG A+ S PAT + + P +LLT+ TSH + N T S
Sbjct: 671 ARRRERQQLTGSAS----SSPATASAAAASKKP-RLLTSQTTTSHTSTSNATTPRSFDTT 725
Query: 439 YSHTEEANREHL 474
SH + + RE L
Sbjct: 726 SSHQDASFRESL 737
>06_01_1095 +
8984363-8984789,8985175-8985416,8985500-8985622,
8985783-8985899,8986258-8986399,8986587-8986627,
8987194-8987453,8987505-8987607,8987698-8987776,
8987856-8988115
Length = 597
Score = 29.9 bits (64), Expect = 2.5
Identities = 19/35 (54%), Positives = 21/35 (60%)
Frame = +1
Query: 100 TLTSLVGPATAQSPTRRRTLAQVQPERGGSNIGSP 204
TL L+ PA A SPTRRR L + P SN GSP
Sbjct: 25 TLPRLL-PAAAPSPTRRRRL--LAPLAAASNSGSP 56
>01_06_0381 +
28878811-28879120,28880189-28880331,28880753-28881532,
28882568-28883968
Length = 877
Score = 29.5 bits (63), Expect = 3.3
Identities = 18/46 (39%), Positives = 22/46 (47%), Gaps = 2/46 (4%)
Frame = +1
Query: 388 SHHANYNFTGSTSLTRCYSHTEEANREHLSGTHKHAL--HRKNLHP 519
S NY+ S +R H E +R H S HKH L H K+L P
Sbjct: 725 SDEENYDSEESYKHSR-KKHRSEDSRAHTSDVHKHKLKRHSKDLEP 769
>12_02_1120 - 26228618-26229403
Length = 261
Score = 29.1 bits (62), Expect = 4.3
Identities = 15/47 (31%), Positives = 21/47 (44%)
Frame = -2
Query: 320 GGETSAVAAHPVRENRADRLDCTEAGRRVRQTTRSRLQHGLPILEPP 180
GGE AA P R + + T R R+ +RS H ++ PP
Sbjct: 140 GGEVVQAAARPTRLTASSEAERTTTMARRRRRSRSHSSHHALMMTPP 186
>11_05_0086 + 18964493-18965737,18965896-18966360
Length = 569
Score = 29.1 bits (62), Expect = 4.3
Identities = 15/35 (42%), Positives = 16/35 (45%)
Frame = -1
Query: 237 GPPNDEITPPARTADIGAPALRLHLR*GAPPRRRL 133
GPP D PP T + A L H R PP R L
Sbjct: 82 GPPPDPNQPPPFTNVVSAALLARHRRAAVPPLRAL 116
>02_03_0287 + 17320242-17320481,17323422-17324767,17325124-17325142
Length = 534
Score = 29.1 bits (62), Expect = 4.3
Identities = 16/44 (36%), Positives = 21/44 (47%)
Frame = +2
Query: 338 HKTFYHHANFLPQQILPATTQTTILRVPPLLHDVTPTLRKPTAN 469
H+ F +FLP +I L+VPP LH V P P A+
Sbjct: 75 HRWFAQGFHFLPARIPMDGPSGWFLKVPPPLHTVDPPGSPPPAS 118
>12_01_1096 + 11494100-11494263,11494489-11494633,11494694-11494741
Length = 118
Score = 28.7 bits (61), Expect = 5.7
Identities = 18/58 (31%), Positives = 25/58 (43%)
Frame = +1
Query: 154 TLAQVQPERGGSNIGSPCWRRDLVVWRTRRPASVQSRRSARFSRTGWAATAEVSPPAT 327
T+AQ P G N + CW R L+V + S + +RTG+ A P T
Sbjct: 38 TMAQASPFYGKPNEDA-CWHRPLLVCQRGFGYSSMMHPNVEITRTGFRAVTTCRLPLT 94
>01_06_1731 +
39516897-39517632,39517744-39517912,39517985-39518488,
39518619-39518747,39519849-39519990,39520082-39520453
Length = 683
Score = 28.7 bits (61), Expect = 5.7
Identities = 21/73 (28%), Positives = 28/73 (38%)
Frame = +1
Query: 124 ATAQSPTRRRTLAQVQPERGGSNIGSPCWRRDLVVWRTRRPASVQSRRSARFSRTGWAAT 303
A+A S T Q Q GG WR W R + A + G AA
Sbjct: 388 ASASSSTATAPSKQSQKGGGGGGGRGGSWRGQKSGWEAR---FLFKEPEAAAAAAGDAAA 444
Query: 304 AEVSPPATCADSQ 342
+E PA+C D++
Sbjct: 445 SETHEPASCKDTR 457
>05_04_0389 -
20845490-20845600,20845697-20846006,20846097-20846242,
20846319-20846426,20846508-20846615,20846997-20847109,
20847340-20847437,20847530-20847714,20847811-20847953,
20848293-20848377,20848486-20848624,20848686-20848780,
20848894-20849037,20849114-20849206,20849310-20849376,
20849529-20849641,20849750-20849845,20853885-20854058
Length = 775
Score = 28.3 bits (60), Expect = 7.6
Identities = 18/57 (31%), Positives = 24/57 (42%)
Frame = +3
Query: 249 LRTVEAICPVLADWVGRDRGSLTSGYLCRLTRHFTTMQTSYRNKSYQPPRKLQFYGF 419
LR E I +A ++ R +GS S Y+ +F SY SY L Y F
Sbjct: 281 LRAPEDIAFAVALFIARKKGSFVSYYMYHGGTNFGRFAASYVTTSYYDGAPLDEYDF 337
>12_02_1174 - 26696869-26698191
Length = 440
Score = 27.9 bits (59), Expect = 10.0
Identities = 23/78 (29%), Positives = 30/78 (38%)
Frame = +1
Query: 106 TSLVGPATAQSPTRRRTLAQVQPERGGSNIGSPCWRRDLVVWRTRRPASVQSRRSARFSR 285
TS P+T SP R L P G G P + + +R + + + R
Sbjct: 332 TSSSPPSTKDSP--RPPLPAPSPAANG---GDPRLPATTPLSKQKRKEEKREKEAQEMGR 386
Query: 286 TGWAATAEVSPPATCADS 339
G AA E PPAT S
Sbjct: 387 AGAAAAEEERPPATATAS 404
>11_01_0044 +
340486-340854,341855-341911,343100-343974,344065-344398,
345553-345645,345913-346062
Length = 625
Score = 27.9 bits (59), Expect = 10.0
Identities = 17/57 (29%), Positives = 24/57 (42%)
Frame = +1
Query: 262 RRSARFSRTGWAATAEVSPPATCADSQDILPPCKLLTATNLTSHHANYNFTGSTSLT 432
RR F+RTGW A A V P + L+ T L + + F + S+T
Sbjct: 433 RRKVSFARTGWLAAALVPMPMAFFLMWKLHDVNTLVAGTALIGLSSGFIFAAAVSVT 489
>09_06_0239 - 21794691-21795986
Length = 431
Score = 27.9 bits (59), Expect = 10.0
Identities = 20/60 (33%), Positives = 26/60 (43%), Gaps = 1/60 (1%)
Frame = +1
Query: 277 FSRTGWAATAEVSPPATC-ADSQDILPPCKLLTATNLTSHHANYNFTGSTSLTRCYSHTE 453
F T + P +C A + D+ P K T NLTS NY ++ S T Y TE
Sbjct: 105 FDTTSDLLWTQCQPCLSCVAQAGDMYDPNKTETYANLTSSSYNYTYS-KQSFTSGYFATE 163
>08_01_0371 - 3284103-3284582
Length = 159
Score = 27.9 bits (59), Expect = 10.0
Identities = 21/68 (30%), Positives = 26/68 (38%)
Frame = -2
Query: 320 GGETSAVAAHPVRENRADRLDCTEAGRRVRQTTRSRLQHGLPILEPPRSGCTCARVRRLV 141
GGE A A+ R A+ R VR+ R G P + P R C R L
Sbjct: 32 GGEAEASASQAWRRGDANVHSDVRVRRGVRRPLRRTATGGAPPMLPQRKRCPTNRRAMLR 91
Query: 140 GDCAVAGP 117
A +GP
Sbjct: 92 RGGARSGP 99
>01_02_0098 - 11087875-11089110,11091744-11092022
Length = 504
Score = 27.9 bits (59), Expect = 10.0
Identities = 15/28 (53%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
Frame = -3
Query: 313 RLPRSR-PTQSARTGQIASTVRRPADGS 233
RLP+S+ P + AR Q AS RRP DG+
Sbjct: 12 RLPQSQAPRRQARGLQYASPERRPLDGA 39
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,325,778
Number of Sequences: 37544
Number of extensions: 530982
Number of successful extensions: 1769
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1705
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1769
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2185924824
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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