Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP10_T7_L01
         (804 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              23   2.5  
AY375535-1|AAQ82648.1|  147|Apis mellifera doublesex protein.          23   4.4  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             23   4.4  
D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    22   7.7  
AY395073-1|AAQ96729.1|  203|Apis mellifera GABA neurotransmitter...    22   7.7  
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    22   7.7  

>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 23.4 bits (48), Expect = 2.5
 Identities = 10/21 (47%), Positives = 11/21 (52%)
 Frame = -1

Query: 240 TGPPNDEITPPARTADIGAPA 178
           T P   EI P  +T D G PA
Sbjct: 305 TAPLGAEIEPSTQTIDFGRPA 325


>AY375535-1|AAQ82648.1|  147|Apis mellifera doublesex protein.
          Length = 147

 Score = 22.6 bits (46), Expect = 4.4
 Identities = 8/24 (33%), Positives = 15/24 (62%)
 Frame = +2

Query: 170 SRSAGAPISAVRAGGVISSFGGPV 241
           S S  +P+S+  + G+ + FGG +
Sbjct: 69  SSSGDSPVSSHSSNGIHTGFGGSI 92


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 22.6 bits (46), Expect = 4.4
 Identities = 17/59 (28%), Positives = 20/59 (33%)
 Frame = +1

Query: 316 PPATCADSQDILPPCKLLTATNLTSHHANYNFTGSTSLTRCYSHTEEANREHLSGTHKH 492
           PPA    S   LP     T T  T+  A    T +T+ T            HL   H H
Sbjct: 96  PPA----SSTSLPATITTTTTTTTTTTATAAATATTTATGLIKQETLQRHHHLQNHHHH 150


>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 21.8 bits (44), Expect = 7.7
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = +3

Query: 750 TVLVPYNSSSNHWLKTN 800
           +V   ++SSSN WL+ N
Sbjct: 425 SVSAGFSSSSNTWLRVN 441


>AY395073-1|AAQ96729.1|  203|Apis mellifera GABA neurotransmitter
           transporter-1A protein.
          Length = 203

 Score = 21.8 bits (44), Expect = 7.7
 Identities = 6/13 (46%), Positives = 10/13 (76%)
 Frame = +2

Query: 5   FFFFLRLHSDLEW 43
           F+FF+ + S+L W
Sbjct: 86  FYFFMSMRSELPW 98


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 21.8 bits (44), Expect = 7.7
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = +3

Query: 750 TVLVPYNSSSNHWLKTN 800
           +V   ++SSSN WL+ N
Sbjct: 425 SVSAGFSSSSNTWLRVN 441


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 225,392
Number of Sequences: 438
Number of extensions: 4962
Number of successful extensions: 13
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25489170
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)