Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP10_T7_K11
         (830 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_01_0493 + 4113869-4116728,4116859-4117370                           30   2.6  
09_04_0737 - 19822822-19822973,19823069-19823135,19823666-198238...    29   6.0  
09_04_0042 - 14055885-14056142,14057508-14057774,14057859-140592...    29   6.0  
12_01_0302 - 2286171-2286341,2286747-2286968                           28   7.9  

>05_01_0493 + 4113869-4116728,4116859-4117370
          Length = 1123

 Score = 29.9 bits (64), Expect = 2.6
 Identities = 13/39 (33%), Positives = 21/39 (53%)
 Frame = -3

Query: 243 TPPFDTVLYDNIRTVLKDNKTALLPASIQASLPSSEIYR 127
           +PP+D  LY  +   + D   +L PA++     S E+YR
Sbjct: 753 SPPWDVTLYQKLEIGVSDVARSLTPANVIGHGWSGEVYR 791


>09_04_0737 -
           19822822-19822973,19823069-19823135,19823666-19823822,
           19824003-19824177,19824364-19824481,19824676-19824874,
           19824983-19825062,19825141-19825257,19825791-19825961,
           19826121-19826597
          Length = 570

 Score = 28.7 bits (61), Expect = 6.0
 Identities = 18/49 (36%), Positives = 25/49 (51%)
 Frame = +1

Query: 73  FYVDSKGVGRNMARIYQLAVDLGGRERSLNRCREKSSFVVLKNRPDVVV 219
           F+VD  G G +  ++++LAV+ G R      CR     VV     DVVV
Sbjct: 93  FHVDPTGDGSSFLQLHRLAVE-GTRRLLAACCRSGVRTVVYTGSADVVV 140


>09_04_0042 - 14055885-14056142,14057508-14057774,14057859-14059292,
            14059378-14059539,14059642-14059768,14059869-14060200,
            14060289-14061083,14061379-14061714,14061791-14062730,
            14063338-14063588
          Length = 1633

 Score = 28.7 bits (61), Expect = 6.0
 Identities = 16/48 (33%), Positives = 25/48 (52%)
 Frame = -3

Query: 264  DPSCYFSTPPFDTVLYDNIRTVLKDNKTALLPASIQASLPSSEIYRQL 121
            +PS   + PP     +D+I  + +   T LLPAS+  S  S + +R L
Sbjct: 1171 NPSYSKAIPPVRIHSFDSIFRLHQRESTGLLPASLHLSSKSVDSFRDL 1218


>12_01_0302 - 2286171-2286341,2286747-2286968
          Length = 130

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 13/34 (38%), Positives = 21/34 (61%)
 Frame = +3

Query: 81  RLQRSRKKHGEDLPTGGRSRRKGEKLE*MQGEEQ 182
           RL+R RK +  D+   G  + +GEKLE  + +E+
Sbjct: 57  RLERLRKGYARDVRAAGAMKVRGEKLENWREKEK 90


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,256,248
Number of Sequences: 37544
Number of extensions: 455425
Number of successful extensions: 1168
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1126
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1166
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2291695380
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)