Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP10_T7_K04
         (788 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_06_0581 - 30386018-30386440                                         29   4.2  
07_03_1137 - 24220597-24220619,24220694-24221414,24221513-242217...    29   5.6  
08_02_0872 + 22097087-22097961,22098083-22098155                       28   7.4  
07_01_0602 + 4485753-4486751                                           28   9.7  
04_03_0736 - 19145428-19145474,19145608-19145721,19146707-191478...    28   9.7  
02_04_0480 - 23274945-23275196,23275558-23275623,23276709-232768...    28   9.7  
01_05_0117 - 18300157-18301106,18301149-18301543,18302592-183026...    28   9.7  

>01_06_0581 - 30386018-30386440
          Length = 140

 Score = 29.1 bits (62), Expect = 4.2
 Identities = 12/25 (48%), Positives = 17/25 (68%)
 Frame = +1

Query: 277 SGVRSQVLERLEMRLRSGGGGARRQ 351
           SG+  +V +R+E   R GGGG RR+
Sbjct: 31  SGIEVKVRKRVEKEARMGGGGRRRR 55


>07_03_1137 -
           24220597-24220619,24220694-24221414,24221513-24221731,
           24221805-24222505,24223127-24223376
          Length = 637

 Score = 28.7 bits (61), Expect = 5.6
 Identities = 17/49 (34%), Positives = 22/49 (44%), Gaps = 7/49 (14%)
 Frame = -3

Query: 714 RIYXMXXSGGWXWD-GSVXCXCRARNRGEXEAR------VAXFQDVFPE 589
           R++    + GW WD G   C     + GE E R      VA  QD FP+
Sbjct: 68  RLWYNALASGWNWDRGVFDCCFSTDSMGEDEYRDYLSGIVAQLQDYFPD 116


>08_02_0872 + 22097087-22097961,22098083-22098155
          Length = 315

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 15/27 (55%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
 Frame = +3

Query: 576 CRGA-SPERHLGTLPRELPXRHGSWLC 653
           CRGA  PE   G LPRE+  R G+ LC
Sbjct: 162 CRGALDPELCQGILPREVFDRWGAALC 188


>07_01_0602 + 4485753-4486751
          Length = 332

 Score = 27.9 bits (59), Expect = 9.7
 Identities = 11/16 (68%), Positives = 12/16 (75%), Gaps = 1/16 (6%)
 Frame = -2

Query: 604 RCLSGDAPRH-TRWRP 560
           RCL+GD PRH  RW P
Sbjct: 69  RCLTGDRPRHWLRWLP 84


>04_03_0736 -
           19145428-19145474,19145608-19145721,19146707-19147870,
           19150251-19150383
          Length = 485

 Score = 27.9 bits (59), Expect = 9.7
 Identities = 11/16 (68%), Positives = 12/16 (75%), Gaps = 1/16 (6%)
 Frame = -2

Query: 604 RCLSGDAPRH-TRWRP 560
           RCL+GD PRH  RW P
Sbjct: 313 RCLTGDRPRHWLRWLP 328


>02_04_0480 -
           23274945-23275196,23275558-23275623,23276709-23276851,
           23276947-23277063,23277219-23278683,23279561-23280730
          Length = 1070

 Score = 27.9 bits (59), Expect = 9.7
 Identities = 12/23 (52%), Positives = 16/23 (69%)
 Frame = +1

Query: 301 ERLEMRLRSGGGGARRQRCTRHT 369
           ERL   ++SGG GA ++R  RHT
Sbjct: 471 ERLHFSVKSGGKGAVKKRKERHT 493


>01_05_0117 - 18300157-18301106,18301149-18301543,18302592-18302681,
            18303723-18303836,18303903-18304046,18316147-18316312,
            18316396-18317130,18317219-18317422,18317496-18318177,
            18318272-18318528,18318604-18319298,18319345-18319382,
            18319847-18319928,18320018-18320112,18320443-18320526,
            18320601-18320891,18321521-18321853,18321948-18322150,
            18322243-18322399,18322482-18322585,18322675-18322835,
            18323511-18323824,18324317-18324589,18324666-18324967,
            18325459-18325549,18326140-18326190,18326700-18326768,
            18326926-18327017,18327082-18327148,18328582-18328746,
            18329027-18329103,18329572-18329766,18330208-18330275,
            18331081-18331172,18331399-18331522,18331608-18331705,
            18332384-18332997,18333620-18333626
          Length = 2892

 Score = 27.9 bits (59), Expect = 9.7
 Identities = 14/34 (41%), Positives = 19/34 (55%)
 Frame = +1

Query: 244  HHALCSHDHSGSGVRSQVLERLEMRLRSGGGGAR 345
            H A C+ D  G GVR + +     RLR+G  G+R
Sbjct: 1373 HEAHCAQDRRGDGVRPRQIR----RLRAGEAGSR 1402


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,945,237
Number of Sequences: 37544
Number of extensions: 222935
Number of successful extensions: 764
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 741
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 763
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2127163404
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)