Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP10_T7_J10
(813 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U19765-1|AAA91782.1| 177|Homo sapiens nucleic acid binding prot... 47 9e-05
M28372-1|AAA61975.1| 177|Homo sapiens SRE-binding protein protein. 47 9e-05
BC093058-1|AAH93058.1| 177|Homo sapiens CCHC-type zinc finger, ... 47 9e-05
BC014911-1|AAH14911.1| 170|Homo sapiens CNBP protein protein. 47 9e-05
BC000288-1|AAH00288.1| 170|Homo sapiens CNBP protein protein. 47 9e-05
AY329622-1|AAR89462.1| 177|Homo sapiens zinc finger protein 9 p... 47 9e-05
DQ092366-1|AAY96754.1| 171|Homo sapiens cellular nucleic acid b... 46 2e-04
DQ091187-1|AAY89856.1| 178|Homo sapiens cellular nucleic acid b... 46 2e-04
BT019613-1|AAV38419.1| 178|Homo sapiens zinc finger protein 9 (... 46 2e-04
AK054592-1|BAB70769.1| 167|Homo sapiens protein ( Homo sapiens ... 46 2e-04
DQ092367-1|AAY96755.1| 172|Homo sapiens cellular nucleic acid b... 45 3e-04
X15332-1|CAA33387.1| 1078|Homo sapiens alpha-1 (III) collagen pr... 36 0.13
X14420-1|CAA32583.1| 1466|Homo sapiens prepro-alpha-1 type 3 col... 36 0.13
BC028178-1|AAH28178.1| 1163|Homo sapiens COL3A1 protein protein. 36 0.13
AY016295-2|AAL13167.1| 1466|Homo sapiens type III preprocollagen... 36 0.13
AC066694-1|AAY24164.1| 1466|Homo sapiens unknown protein. 36 0.13
AL354664-1|CAH71310.1| 3063|Homo sapiens collagen type XII alpha... 35 0.30
AL096771-4|CAM28081.1| 317|Homo sapiens collagen type XII alpha... 35 0.30
AL096771-3|CAI19908.1| 3063|Homo sapiens collagen type XII alpha... 35 0.30
AL080250-2|CAI19898.1| 3063|Homo sapiens collagen type XII alpha... 35 0.30
AK127166-1|BAC86864.1| 131|Homo sapiens protein ( Homo sapiens ... 35 0.30
U73778-1|AAC51244.1| 3063|Homo sapiens collagen type XII alpha-1... 35 0.40
BC110812-1|AAI10813.1| 238|Homo sapiens complement component 1,... 34 0.53
BC009326-1|AAH09326.2| 595|Homo sapiens SCARF2 protein protein. 34 0.53
AF522196-1|AAN45861.1| 870|Homo sapiens scavenger receptor type... 34 0.53
AF024700-1|AAB81090.1| 66|Homo sapiens zinc finger protein pro... 34 0.53
AB052951-1|BAC53753.1| 866|Homo sapiens SRECRP-1 protein. 34 0.53
AB024433-1|BAD93345.1| 866|Homo sapiens NSR1 protein. 34 0.53
AL353658-3|CAH72958.1| 872|Homo sapiens KCNQ2 protein. 34 0.70
AL121829-3|CAI95740.1| 872|Homo sapiens KCNQ2 protein. 34 0.70
AF033348-1|AAB97315.1| 872|Homo sapiens potassium channel protein. 34 0.70
X80031-1|CAA56335.1| 1670|Homo sapiens type IV collagen alpha 3 ... 33 0.93
X57010-1|CAA40330.1| 243|Homo sapiens collagen II alpha 1 chain... 33 0.93
X16711-1|CAA34683.1| 1160|Homo sapiens COL2A1 protein. 33 0.93
X16468-1|CAA34488.1| 1418|Homo sapiens protein ( Human mRNA for ... 33 0.93
M59819-1|AAA63177.1| 771|Homo sapiens granulocyte colony-stimul... 33 0.93
M25730-1|AAA58428.2| 167|Homo sapiens alpha-1 type II collagen ... 33 0.93
L10347-1|AAC41772.1| 1487|Homo sapiens alpha-1 type II collagen ... 33 0.93
BC116449-1|AAI16450.1| 1487|Homo sapiens collagen, type II, alph... 33 0.93
AJ288487-1|CAC36101.1| 1670|Homo sapiens alpha3 type IV collagen... 33 0.93
AC097662-1|AAY24251.1| 1084|Homo sapiens unknown protein. 33 0.93
Y00706-1|CAA68698.1| 1212|Homo sapiens protein ( Human mRNA for ... 33 1.2
X05561-1|CAA29075.1| 944|Homo sapiens protein ( Human mRNA for ... 33 1.2
M26576-1|AAA53098.1| 1669|Homo sapiens alpha-1 type IV collagen ... 33 1.2
BC151220-1|AAI51221.1| 1669|Homo sapiens COL4A1 protein protein. 33 1.2
BC142626-1|AAI42627.1| 519|Homo sapiens COL4A1 protein protein. 33 1.2
BC005990-1|AAH05990.1| 405|Homo sapiens Unknown (protein for IM... 33 1.2
AL390755-2|CAM20295.1| 1318|Homo sapiens collagen type IV alpha ... 33 1.2
AL390755-1|CAH74130.1| 1669|Homo sapiens collagen type IV alpha ... 33 1.2
AL161773-2|CAM14222.1| 1318|Homo sapiens collagen type IV alpha ... 33 1.2
AL161773-1|CAH71365.1| 1669|Homo sapiens collagen type IV alpha ... 33 1.2
U04520-2|AAC27816.1| 1685|Homo sapiens type IV collagen alpha 5 ... 33 1.6
U04520-1|AAF66217.2| 1691|Homo sapiens type IV collagen alpha 5 ... 33 1.6
M90464-1|AAA52046.1| 910|Homo sapiens alpha-5 type IV collagen ... 33 1.6
M58526-1|AAA99480.1| 1604|Homo sapiens alpha-5 type IV collagen ... 33 1.6
BC021176-1|AAH21176.1| 166|Homo sapiens zinc finger, CCHC domai... 33 1.6
AL512408-3|CAI23484.1| 2285|Homo sapiens AT rich interactive dom... 33 1.6
AL512408-2|CAI23483.1| 1175|Homo sapiens AT rich interactive dom... 33 1.6
AL512408-1|CAI23482.1| 1685|Homo sapiens AT rich interactive dom... 33 1.6
AL353658-1|CAH72955.1| 436|Homo sapiens KCNQ2 protein. 33 1.6
AL121829-1|CAI95738.1| 436|Homo sapiens KCNQ2 protein. 33 1.6
AL035425-1|CAB90289.2| 1685|Homo sapiens collagen type IV alpha ... 33 1.6
AL034380-9|CAI21623.1| 2285|Homo sapiens AT rich interactive dom... 33 1.6
AL034380-7|CAI21622.1| 1175|Homo sapiens AT rich interactive dom... 33 1.6
AL034380-6|CAI21621.1| 1685|Homo sapiens AT rich interactive dom... 33 1.6
AL034369-4|CAA22267.2| 1685|Homo sapiens collagen type IV alpha ... 33 1.6
AL031622-1|CAI43038.1| 1685|Homo sapiens collagen type IV alpha ... 33 1.6
AF521670-1|AAN03446.1| 1999|Homo sapiens SWI/SNF chromatin remod... 33 1.6
AF268913-1|AAK54505.1| 1685|Homo sapiens OSA1 nuclear protein pr... 33 1.6
AF265208-1|AAF75765.1| 1927|Homo sapiens SWI-SNF complex protein... 33 1.6
AF231056-1|AAG33967.1| 2285|Homo sapiens BRG1-Associated Factor ... 33 1.6
AF219114-1|AAG17549.2| 1939|Homo sapiens chromatin remodelling f... 33 1.6
AB210022-1|BAE06104.1| 1374|Homo sapiens ARID1A variant protein ... 33 1.6
AB051293-1|BAB55599.1| 1208|Homo sapiens SWI related protein pro... 33 1.6
AB024075-1|BAA83073.1| 1119|Homo sapiens B120 protein. 33 1.6
AB001895-1|BAA23269.1| 1142|Homo sapiens B120 protein. 33 1.6
BC014850-1|AAH14850.1| 371|Homo sapiens ZNF607 protein protein. 32 2.1
AK131559-1|BAD18693.1| 695|Homo sapiens protein ( Homo sapiens ... 32 2.1
AK131557-1|BAD18691.1| 696|Homo sapiens protein ( Homo sapiens ... 32 2.1
AK027708-1|BAB55313.1| 371|Homo sapiens protein ( Homo sapiens ... 32 2.1
AJ404468-1|CAB94756.1| 4486|Homo sapiens axonemal dynein heavy c... 32 2.1
AF257737-1|AAF69004.1| 4486|Homo sapiens ciliary dynein heavy ch... 32 2.1
AB209242-1|BAD92479.1| 389|Homo sapiens zinc finger protein 607... 32 2.1
S57132-1|AAB25797.1| 1186|Homo sapiens type XVI collagen alpha 1... 32 2.8
M92642-1|AAA58427.1| 1603|Homo sapiens alpha-1 type XVI collagen... 32 2.8
BC107584-1|AAI07585.1| 239|Homo sapiens ZCCHC3 protein protein. 32 2.8
BC069238-1|AAH69238.1| 403|Homo sapiens zinc finger, CCHC domai... 32 2.8
BC036940-1|AAH36940.1| 542|Homo sapiens ZCCHC7 protein protein. 32 2.8
AY436367-1|AAR11855.1| 54|Homo sapiens cellular nucleic acid b... 32 2.8
AL512604-1|CAI12725.2| 543|Homo sapiens zinc finger, CCHC domai... 32 2.8
AL158155-1|CAI13846.2| 543|Homo sapiens zinc finger, CCHC domai... 32 2.8
AL034548-4|CAB81631.1| 404|Homo sapiens zinc finger, CCHC domai... 32 2.8
AK074608-1|BAC11087.1| 391|Homo sapiens protein ( Homo sapiens ... 32 2.8
AK026264-1|BAB15418.1| 454|Homo sapiens protein ( Homo sapiens ... 32 2.8
AB209571-1|BAD92808.1| 1463|Homo sapiens alpha 1 type XVI collag... 32 2.8
Z95116-3|CAI17988.1| 423|Homo sapiens protein ( Human DNA seque... 31 3.7
CR456407-1|CAG30293.1| 443|Homo sapiens bK984G1.1 protein. 31 3.7
BC047305-1|AAH47305.1| 1075|Homo sapiens COL4A1 protein protein. 31 3.7
BC046358-1|AAH46358.1| 443|Homo sapiens EMI domain containing 1... 31 3.7
BC012062-1|AAH12062.1| 407|Homo sapiens DAZ associated protein ... 31 3.7
AY675556-1|AAV91783.1| 474|Homo sapiens myocyte enhancer factor... 31 3.7
AL031186-3|CAI18002.1| 423|Homo sapiens protein ( Human DNA seq... 31 3.7
AK056850-1|BAB71295.1| 289|Homo sapiens protein ( Homo sapiens ... 31 3.7
AJ416090-1|CAC94777.1| 441|Homo sapiens putative emu1 protein p... 31 3.7
AF181719-1|AAF78364.1| 407|Homo sapiens DAZ associated protein ... 31 3.7
AF177941-1|AAF59902.1| 1745|Homo sapiens collagen type V alpha 3... 31 3.7
AB209175-1|BAD92412.1| 1658|Homo sapiens collagen, type V, alpha... 31 3.7
Y13468-1|CAA73868.1| 114|Homo sapiens basic fibroblast growth f... 31 5.0
S81809-1|AAB21432.2| 114|Homo sapiens basic fibroblast growth f... 31 5.0
J04513-2|AAA52532.1| 196|Homo sapiens FGF2 protein. 31 5.0
J04513-1|AAA52531.1| 210|Homo sapiens FGF2 protein. 31 5.0
BC065530-1|AAH65530.1| 1003|Homo sapiens methyl-CpG binding doma... 31 5.0
AL161779-2|CAI42091.1| 1478|Homo sapiens IQ motif and Sec7 domai... 31 5.0
AL139396-1|CAI39832.1| 1478|Homo sapiens IQ motif and Sec7 domai... 31 5.0
AK056399-1|BAB71176.1| 1003|Homo sapiens protein ( Homo sapiens ... 31 5.0
AF229122-1|AAF43200.1| 291|Homo sapiens acetylcholinesterase co... 31 5.0
AB067474-1|BAB67780.1| 967|Homo sapiens KIAA1887 protein protein. 31 5.0
AB011094-1|BAA25448.1| 1560|Homo sapiens KIAA0522 protein protein. 31 5.0
Y17397-1|CAA76763.1| 1690|Homo sapiens collagen alpha 4 type IV ... 31 6.5
Y11710-1|CAA72402.1| 755|Homo sapiens collagen type XIV protein. 31 6.5
X81053-1|CAA56943.1| 1690|Homo sapiens type IV collagen alpha 4 ... 31 6.5
X13783-1|CAA32030.1| 714|Homo sapiens alpha-1 type 2 collagen (... 31 6.5
U15306-1|AAA69517.1| 1104|Homo sapiens NFX1 protein. 31 6.5
M59227-1|AAB59383.1| 155|Homo sapiens alpha-1 type III collagen... 31 6.5
BC083495-1|AAH83495.1| 388|Homo sapiens COL14A1 protein protein. 31 6.5
BC053648-1|AAH53648.1| 891|Homo sapiens TBC1D1 protein protein. 31 6.5
BC050321-1|AAH50321.3| 1168|Homo sapiens TBC1 (tre-2/USP6, BUB2,... 31 6.5
BC027891-1|AAH27891.1| 172|Homo sapiens GATA6 protein protein. 31 6.5
BC014640-1|AAH14640.1| 759|Homo sapiens COL14A1 protein protein. 31 6.5
BC014529-1|AAH14529.1| 900|Homo sapiens TBC1D1 protein protein. 31 6.5
BC012151-1|AAH12151.1| 1120|Homo sapiens nuclear transcription f... 31 6.5
BC006447-1|AAH06447.1| 681|Homo sapiens NFX1 protein protein. 31 6.5
AL356472-7|CAH72747.3| 833|Homo sapiens nuclear transcription f... 31 6.5
AL356472-6|CAH72746.1| 1120|Homo sapiens nuclear transcription f... 31 6.5
AL356472-5|CAH72745.1| 1024|Homo sapiens nuclear transcription f... 31 6.5
AL356218-4|CAI13305.1| 1120|Homo sapiens nuclear transcription f... 31 6.5
AL356218-3|CAI13304.1| 1024|Homo sapiens nuclear transcription f... 31 6.5
AK223547-1|BAD97267.1| 595|Homo sapiens GATA binding protein 6 ... 31 6.5
AK027355-1|BAB55057.1| 674|Homo sapiens protein ( Homo sapiens ... 31 6.5
AJ606308-1|CAE54436.1| 4262|Homo sapiens secreted mucin MUC17 pr... 31 6.5
AJ606307-1|CAE54435.1| 4493|Homo sapiens membrane mucin MUC17 pr... 31 6.5
AF332009-1|AAK16545.1| 1024|Homo sapiens nuclear transcription f... 31 6.5
AC079235-1|AAY14670.1| 1324|Homo sapiens unknown protein. 31 6.5
AB209284-1|BAD92521.1| 352|Homo sapiens tripartite motif-contai... 31 6.5
AB029031-1|BAA83060.1| 763|Homo sapiens KIAA1108 protein protein. 31 6.5
M23618-1|AAA88076.1| 95|Homo sapiens high mobility group prote... 30 8.7
L49169-1|AAB53946.1| 338|Homo sapiens G0S3 protein. 30 8.7
CR542101-1|CAG46898.1| 338|Homo sapiens FOSB protein. 30 8.7
BC117319-1|AAI17320.1| 257|Homo sapiens TPRXL protein protein. 30 8.7
BC040197-1|AAH40197.1| 289|Homo sapiens FOSB protein protein. 30 8.7
BC036724-1|AAH36724.1| 338|Homo sapiens FBJ murine osteosarcoma... 30 8.7
BC001760-1|AAH01760.1| 567|Homo sapiens replication initiator 1... 30 8.7
BC000363-1|AAH00363.2| 556|Homo sapiens replication initiator 1... 30 8.7
AY898963-1|AAW65374.1| 338|Homo sapiens FBJ murine osteosarcoma... 30 8.7
AK127518-1|BAC87015.1| 178|Homo sapiens protein ( Homo sapiens ... 30 8.7
AK092426-1|BAC03887.1| 258|Homo sapiens protein ( Homo sapiens ... 30 8.7
AK074500-1|BAC11025.1| 401|Homo sapiens protein ( Homo sapiens ... 30 8.7
AJ245553-1|CAB53100.1| 556|Homo sapiens AP4 protein protein. 30 8.7
AF378754-1|AAL11991.1| 2063|Homo sapiens tumor endothelial marke... 30 8.7
AF201303-1|AAF26712.1| 567|Homo sapiens dhfr oribeta-binding pr... 30 8.7
AC005586-2|AAS00386.1| 556|Homo sapiens unknown protein. 30 8.7
AC005586-1|AAS00385.1| 567|Homo sapiens unknown protein. 30 8.7
>U19765-1|AAA91782.1| 177|Homo sapiens nucleic acid binding protein
protein.
Length = 177
Score = 46.8 bits (106), Expect = 9e-05
Identities = 26/60 (43%), Positives = 30/60 (50%), Gaps = 4/60 (6%)
Frame = -2
Query: 560 PAQCHRCQAFGHASNNCH-RAVRCVRCA-GEHIVADCPRP-REGPFICANCGK-GHAAVD 393
P C+RC GH + +C + C C G HI DC P RE C NCGK GH A D
Sbjct: 51 PDICYRCGESGHLAKDCDLQEDACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARD 110
Score = 38.7 bits (86), Expect = 0.025
Identities = 21/55 (38%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Frame = -2
Query: 554 QCHRCQAFGHASNNCHRAVRCVRCAGE--HIVADCPRPREGPFICANCGK-GHAA 399
+C+ C FGH +C + V+C RC GE H+ +C + E C CG+ GH A
Sbjct: 118 KCYSCGEFGHIQKDCTK-VKCYRC-GETGHVAINCSKTSE--VNCYRCGESGHLA 168
Score = 31.9 bits (69), Expect = 2.8
Identities = 13/36 (36%), Positives = 19/36 (52%), Gaps = 3/36 (8%)
Frame = -2
Query: 554 QCHRCQAFGHASNNCHRA--VRCVRCA-GEHIVADC 456
+C+RC GH + NC + V C RC H+ +C
Sbjct: 136 KCYRCGETGHVAINCSKTSEVNCYRCGESGHLAREC 171
>M28372-1|AAA61975.1| 177|Homo sapiens SRE-binding protein protein.
Length = 177
Score = 46.8 bits (106), Expect = 9e-05
Identities = 26/60 (43%), Positives = 30/60 (50%), Gaps = 4/60 (6%)
Frame = -2
Query: 560 PAQCHRCQAFGHASNNCH-RAVRCVRCA-GEHIVADCPRP-REGPFICANCGK-GHAAVD 393
P C+RC GH + +C + C C G HI DC P RE C NCGK GH A D
Sbjct: 51 PDICYRCGESGHLAKDCDLQEDACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARD 110
Score = 38.7 bits (86), Expect = 0.025
Identities = 21/55 (38%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Frame = -2
Query: 554 QCHRCQAFGHASNNCHRAVRCVRCAGE--HIVADCPRPREGPFICANCGK-GHAA 399
+C+ C FGH +C + V+C RC GE H+ +C + E C CG+ GH A
Sbjct: 118 KCYSCGEFGHIQKDCTK-VKCYRC-GETGHVAINCSKTSE--VNCYRCGESGHLA 168
Score = 31.9 bits (69), Expect = 2.8
Identities = 13/36 (36%), Positives = 19/36 (52%), Gaps = 3/36 (8%)
Frame = -2
Query: 554 QCHRCQAFGHASNNCHRA--VRCVRCA-GEHIVADC 456
+C+RC GH + NC + V C RC H+ +C
Sbjct: 136 KCYRCGETGHVAINCSKTSEVNCYRCGESGHLAREC 171
>BC093058-1|AAH93058.1| 177|Homo sapiens CCHC-type zinc finger,
nucleic acid binding protein protein.
Length = 177
Score = 46.8 bits (106), Expect = 9e-05
Identities = 26/60 (43%), Positives = 30/60 (50%), Gaps = 4/60 (6%)
Frame = -2
Query: 560 PAQCHRCQAFGHASNNCH-RAVRCVRCA-GEHIVADCPRP-REGPFICANCGK-GHAAVD 393
P C+RC GH + +C + C C G HI DC P RE C NCGK GH A D
Sbjct: 51 PDICYRCGESGHLAKDCDLQEDACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARD 110
Score = 38.7 bits (86), Expect = 0.025
Identities = 21/55 (38%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Frame = -2
Query: 554 QCHRCQAFGHASNNCHRAVRCVRCAGE--HIVADCPRPREGPFICANCGK-GHAA 399
+C+ C FGH +C + V+C RC GE H+ +C + E C CG+ GH A
Sbjct: 118 KCYSCGEFGHIQKDCTK-VKCYRC-GETGHVAINCSKTSE--VNCYRCGESGHLA 168
Score = 31.9 bits (69), Expect = 2.8
Identities = 13/36 (36%), Positives = 19/36 (52%), Gaps = 3/36 (8%)
Frame = -2
Query: 554 QCHRCQAFGHASNNCHRA--VRCVRCA-GEHIVADC 456
+C+RC GH + NC + V C RC H+ +C
Sbjct: 136 KCYRCGETGHVAINCSKTSEVNCYRCGESGHLAREC 171
>BC014911-1|AAH14911.1| 170|Homo sapiens CNBP protein protein.
Length = 170
Score = 46.8 bits (106), Expect = 9e-05
Identities = 26/60 (43%), Positives = 30/60 (50%), Gaps = 4/60 (6%)
Frame = -2
Query: 560 PAQCHRCQAFGHASNNCH-RAVRCVRCA-GEHIVADCPRP-REGPFICANCGK-GHAAVD 393
P C+RC GH + +C + C C G HI DC P RE C NCGK GH A D
Sbjct: 44 PDICYRCGESGHLAKDCDLQEDACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARD 103
Score = 38.7 bits (86), Expect = 0.025
Identities = 21/55 (38%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Frame = -2
Query: 554 QCHRCQAFGHASNNCHRAVRCVRCAGE--HIVADCPRPREGPFICANCGK-GHAA 399
+C+ C FGH +C + V+C RC GE H+ +C + E C CG+ GH A
Sbjct: 111 KCYSCGEFGHIQKDCTK-VKCYRC-GETGHVAINCSKTSE--VNCYRCGESGHLA 161
Score = 31.9 bits (69), Expect = 2.8
Identities = 13/36 (36%), Positives = 19/36 (52%), Gaps = 3/36 (8%)
Frame = -2
Query: 554 QCHRCQAFGHASNNCHRA--VRCVRCA-GEHIVADC 456
+C+RC GH + NC + V C RC H+ +C
Sbjct: 129 KCYRCGETGHVAINCSKTSEVNCYRCGESGHLAREC 164
>BC000288-1|AAH00288.1| 170|Homo sapiens CNBP protein protein.
Length = 170
Score = 46.8 bits (106), Expect = 9e-05
Identities = 26/60 (43%), Positives = 30/60 (50%), Gaps = 4/60 (6%)
Frame = -2
Query: 560 PAQCHRCQAFGHASNNCH-RAVRCVRCA-GEHIVADCPRP-REGPFICANCGK-GHAAVD 393
P C+RC GH + +C + C C G HI DC P RE C NCGK GH A D
Sbjct: 44 PDICYRCGESGHLAKDCDLQEDACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARD 103
Score = 38.7 bits (86), Expect = 0.025
Identities = 21/55 (38%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Frame = -2
Query: 554 QCHRCQAFGHASNNCHRAVRCVRCAGE--HIVADCPRPREGPFICANCGK-GHAA 399
+C+ C FGH +C + V+C RC GE H+ +C + E C CG+ GH A
Sbjct: 111 KCYSCGEFGHIQKDCTK-VKCYRC-GETGHVAINCSKTSE--VNCYRCGESGHLA 161
Score = 31.9 bits (69), Expect = 2.8
Identities = 13/36 (36%), Positives = 19/36 (52%), Gaps = 3/36 (8%)
Frame = -2
Query: 554 QCHRCQAFGHASNNCHRA--VRCVRCA-GEHIVADC 456
+C+RC GH + NC + V C RC H+ +C
Sbjct: 129 KCYRCGETGHVAINCSKTSEVNCYRCGESGHLAREC 164
>AY329622-1|AAR89462.1| 177|Homo sapiens zinc finger protein 9
protein.
Length = 177
Score = 46.8 bits (106), Expect = 9e-05
Identities = 26/60 (43%), Positives = 30/60 (50%), Gaps = 4/60 (6%)
Frame = -2
Query: 560 PAQCHRCQAFGHASNNCH-RAVRCVRCA-GEHIVADCPRP-REGPFICANCGK-GHAAVD 393
P C+RC GH + +C + C C G HI DC P RE C NCGK GH A D
Sbjct: 51 PDICYRCGESGHLAKDCDLQEDACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARD 110
Score = 38.7 bits (86), Expect = 0.025
Identities = 21/55 (38%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Frame = -2
Query: 554 QCHRCQAFGHASNNCHRAVRCVRCAGE--HIVADCPRPREGPFICANCGK-GHAA 399
+C+ C FGH +C + V+C RC GE H+ +C + E C CG+ GH A
Sbjct: 118 KCYSCGEFGHIQKDCTK-VKCYRC-GETGHVAINCSKTSE--VNCYRCGESGHLA 168
Score = 31.9 bits (69), Expect = 2.8
Identities = 13/36 (36%), Positives = 19/36 (52%), Gaps = 3/36 (8%)
Frame = -2
Query: 554 QCHRCQAFGHASNNCHRA--VRCVRCA-GEHIVADC 456
+C+RC GH + NC + V C RC H+ +C
Sbjct: 136 KCYRCGETGHVAINCSKTSEVNCYRCGESGHLAREC 171
>DQ092366-1|AAY96754.1| 171|Homo sapiens cellular nucleic acid
binding protein beta variant 1 protein.
Length = 171
Score = 46.0 bits (104), Expect = 2e-04
Identities = 26/61 (42%), Positives = 29/61 (47%), Gaps = 5/61 (8%)
Frame = -2
Query: 560 PAQCHRCQAFGHASNNC--HRAVRCVRCA-GEHIVADCPRP-REGPFICANCGK-GHAAV 396
P C+RC GH + +C C C G HI DC P RE C NCGK GH A
Sbjct: 44 PDICYRCGESGHLAKDCDLQEDEACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLAR 103
Query: 395 D 393
D
Sbjct: 104 D 104
Score = 38.7 bits (86), Expect = 0.025
Identities = 21/55 (38%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Frame = -2
Query: 554 QCHRCQAFGHASNNCHRAVRCVRCAGE--HIVADCPRPREGPFICANCGK-GHAA 399
+C+ C FGH +C + V+C RC GE H+ +C + E C CG+ GH A
Sbjct: 112 KCYSCGEFGHIQKDCTK-VKCYRC-GETGHVAINCSKTSE--VNCYRCGESGHLA 162
Score = 31.9 bits (69), Expect = 2.8
Identities = 13/36 (36%), Positives = 19/36 (52%), Gaps = 3/36 (8%)
Frame = -2
Query: 554 QCHRCQAFGHASNNCHRA--VRCVRCA-GEHIVADC 456
+C+RC GH + NC + V C RC H+ +C
Sbjct: 130 KCYRCGETGHVAINCSKTSEVNCYRCGESGHLAREC 165
>DQ091187-1|AAY89856.1| 178|Homo sapiens cellular nucleic acid
binding protein alpha variant 1 protein.
Length = 178
Score = 46.0 bits (104), Expect = 2e-04
Identities = 26/61 (42%), Positives = 29/61 (47%), Gaps = 5/61 (8%)
Frame = -2
Query: 560 PAQCHRCQAFGHASNNC--HRAVRCVRCA-GEHIVADCPRP-REGPFICANCGK-GHAAV 396
P C+RC GH + +C C C G HI DC P RE C NCGK GH A
Sbjct: 51 PDICYRCGESGHLAKDCDLQEDEACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLAR 110
Query: 395 D 393
D
Sbjct: 111 D 111
Score = 38.7 bits (86), Expect = 0.025
Identities = 21/55 (38%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Frame = -2
Query: 554 QCHRCQAFGHASNNCHRAVRCVRCAGE--HIVADCPRPREGPFICANCGK-GHAA 399
+C+ C FGH +C + V+C RC GE H+ +C + E C CG+ GH A
Sbjct: 119 KCYSCGEFGHIQKDCTK-VKCYRC-GETGHVAINCSKTSE--VNCYRCGESGHLA 169
Score = 31.9 bits (69), Expect = 2.8
Identities = 13/36 (36%), Positives = 19/36 (52%), Gaps = 3/36 (8%)
Frame = -2
Query: 554 QCHRCQAFGHASNNCHRA--VRCVRCA-GEHIVADC 456
+C+RC GH + NC + V C RC H+ +C
Sbjct: 137 KCYRCGETGHVAINCSKTSEVNCYRCGESGHLAREC 172
>BT019613-1|AAV38419.1| 178|Homo sapiens zinc finger protein 9 (a
cellular retroviral nucleic acid binding protein)
protein.
Length = 178
Score = 46.0 bits (104), Expect = 2e-04
Identities = 26/61 (42%), Positives = 29/61 (47%), Gaps = 5/61 (8%)
Frame = -2
Query: 560 PAQCHRCQAFGHASNNC--HRAVRCVRCA-GEHIVADCPRP-REGPFICANCGK-GHAAV 396
P C+RC GH + +C C C G HI DC P RE C NCGK GH A
Sbjct: 51 PDICYRCGESGHLAKDCDLQEDEACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLAR 110
Query: 395 D 393
D
Sbjct: 111 D 111
Score = 38.7 bits (86), Expect = 0.025
Identities = 21/55 (38%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Frame = -2
Query: 554 QCHRCQAFGHASNNCHRAVRCVRCAGE--HIVADCPRPREGPFICANCGK-GHAA 399
+C+ C FGH +C + V+C RC GE H+ +C + E C CG+ GH A
Sbjct: 119 KCYSCGEFGHIQKDCTK-VKCYRC-GETGHVAINCSKTSE--VNCYRCGESGHLA 169
Score = 31.9 bits (69), Expect = 2.8
Identities = 13/36 (36%), Positives = 19/36 (52%), Gaps = 3/36 (8%)
Frame = -2
Query: 554 QCHRCQAFGHASNNCHRA--VRCVRCA-GEHIVADC 456
+C+RC GH + NC + V C RC H+ +C
Sbjct: 137 KCYRCGETGHVAINCSKTSEVNCYRCGESGHLAREC 172
>AK054592-1|BAB70769.1| 167|Homo sapiens protein ( Homo sapiens
cDNA FLJ30030 fis, clone 3NB692001339, highly similar to
CELLULAR NUCLEIC ACID BINDING PROTEIN. ).
Length = 167
Score = 46.0 bits (104), Expect = 2e-04
Identities = 25/57 (43%), Positives = 29/57 (50%), Gaps = 4/57 (7%)
Frame = -2
Query: 551 CHRCQAFGHASNNCH-RAVRCVRCA-GEHIVADCPRP-REGPFICANCGK-GHAAVD 393
C+RC GH + +C + C C G HI DC P RE C NCGK GH A D
Sbjct: 44 CYRCGESGHLAKDCDLQEDACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARD 100
Score = 38.7 bits (86), Expect = 0.025
Identities = 21/55 (38%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Frame = -2
Query: 554 QCHRCQAFGHASNNCHRAVRCVRCAGE--HIVADCPRPREGPFICANCGK-GHAA 399
+C+ C FGH +C + V+C RC GE H+ +C + E C CG+ GH A
Sbjct: 108 KCYSCGEFGHIQKDCTK-VKCYRC-GETGHVAINCSKTSE--VNCYRCGESGHLA 158
Score = 31.9 bits (69), Expect = 2.8
Identities = 13/36 (36%), Positives = 19/36 (52%), Gaps = 3/36 (8%)
Frame = -2
Query: 554 QCHRCQAFGHASNNCHRA--VRCVRCA-GEHIVADC 456
+C+RC GH + NC + V C RC H+ +C
Sbjct: 126 KCYRCGETGHVAINCSKTSEVNCYRCGESGHLAREC 161
>DQ092367-1|AAY96755.1| 172|Homo sapiens cellular nucleic acid
binding protein beta variant 2 protein.
Length = 172
Score = 45.2 bits (102), Expect = 3e-04
Identities = 26/62 (41%), Positives = 29/62 (46%), Gaps = 6/62 (9%)
Frame = -2
Query: 560 PAQCHRCQAFGHASNNC---HRAVRCVRCA-GEHIVADCPRP-REGPFICANCGK-GHAA 399
P C+RC GH + +C C C G HI DC P RE C NCGK GH A
Sbjct: 44 PDICYRCGESGHLAKDCDLQEDVEACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLA 103
Query: 398 VD 393
D
Sbjct: 104 RD 105
Score = 38.7 bits (86), Expect = 0.025
Identities = 21/55 (38%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Frame = -2
Query: 554 QCHRCQAFGHASNNCHRAVRCVRCAGE--HIVADCPRPREGPFICANCGK-GHAA 399
+C+ C FGH +C + V+C RC GE H+ +C + E C CG+ GH A
Sbjct: 113 KCYSCGEFGHIQKDCTK-VKCYRC-GETGHVAINCSKTSE--VNCYRCGESGHLA 163
Score = 31.9 bits (69), Expect = 2.8
Identities = 13/36 (36%), Positives = 19/36 (52%), Gaps = 3/36 (8%)
Frame = -2
Query: 554 QCHRCQAFGHASNNCHRA--VRCVRCA-GEHIVADC 456
+C+RC GH + NC + V C RC H+ +C
Sbjct: 131 KCYRCGETGHVAINCSKTSEVNCYRCGESGHLAREC 166
>X15332-1|CAA33387.1| 1078|Homo sapiens alpha-1 (III) collagen
protein.
Length = 1078
Score = 36.3 bits (80), Expect = 0.13
Identities = 17/40 (42%), Positives = 20/40 (50%)
Frame = -1
Query: 231 PPFPSG*YSTCHRGGQRNSGYPDGRGEPSTTGHKAPPGPP 112
PP P G ++ H G + GY GEP G PPGPP
Sbjct: 34 PPGPPG--TSGHPGSPGSPGYQGPPGEPGQAGPSGPPGPP 71
Score = 31.5 bits (68), Expect = 3.7
Identities = 14/30 (46%), Positives = 17/30 (56%), Gaps = 3/30 (10%)
Frame = -1
Query: 192 GGQRNSGYPDGRGEPSTTGH---KAPPGPP 112
G ++G P RGEP GH + PPGPP
Sbjct: 210 GSPGSNGAPGQRGEPGPQGHAGAQGPPGPP 239
Score = 31.1 bits (67), Expect = 5.0
Identities = 18/51 (35%), Positives = 20/51 (39%), Gaps = 1/51 (1%)
Frame = -1
Query: 261 GQGQGKEFTSPPFPSG*YSTCHR-GGQRNSGYPDGRGEPSTTGHKAPPGPP 112
G G PP P G GG +G+P RG P G PGPP
Sbjct: 696 GPPGGSGPAGPPGPQGVKGERGSPGGPGAAGFPGARGLPGPPGSNGNPGPP 746
Score = 30.7 bits (66), Expect = 6.5
Identities = 16/42 (38%), Positives = 19/42 (45%)
Frame = -1
Query: 237 TSPPFPSG*YSTCHRGGQRNSGYPDGRGEPSTTGHKAPPGPP 112
T PP P+G G +G P G+GE G K GPP
Sbjct: 656 TGPPGPAG-----FPGAPGQNGEPGGKGERGAPGEKGEGGPP 692
>X14420-1|CAA32583.1| 1466|Homo sapiens prepro-alpha-1 type 3
collagen protein.
Length = 1466
Score = 36.3 bits (80), Expect = 0.13
Identities = 17/40 (42%), Positives = 20/40 (50%)
Frame = -1
Query: 231 PPFPSG*YSTCHRGGQRNSGYPDGRGEPSTTGHKAPPGPP 112
PP P G ++ H G + GY GEP G PPGPP
Sbjct: 181 PPGPPG--TSGHPGSPGSPGYQGPPGEPGQAGPSGPPGPP 218
Score = 31.5 bits (68), Expect = 3.7
Identities = 14/30 (46%), Positives = 17/30 (56%), Gaps = 3/30 (10%)
Frame = -1
Query: 192 GGQRNSGYPDGRGEPSTTGH---KAPPGPP 112
G ++G P RGEP GH + PPGPP
Sbjct: 357 GSPGSNGAPGQRGEPGPQGHAGAQGPPGPP 386
Score = 31.1 bits (67), Expect = 5.0
Identities = 18/51 (35%), Positives = 20/51 (39%), Gaps = 1/51 (1%)
Frame = -1
Query: 261 GQGQGKEFTSPPFPSG*YSTCHR-GGQRNSGYPDGRGEPSTTGHKAPPGPP 112
G G PP P G GG +G+P RG P G PGPP
Sbjct: 843 GPPGGSGPAGPPGPQGVKGERGSPGGPGAAGFPGARGLPGPPGSNGNPGPP 893
Score = 30.7 bits (66), Expect = 6.5
Identities = 16/42 (38%), Positives = 19/42 (45%)
Frame = -1
Query: 237 TSPPFPSG*YSTCHRGGQRNSGYPDGRGEPSTTGHKAPPGPP 112
T PP P+G G +G P G+GE G K GPP
Sbjct: 803 TGPPGPAG-----FPGAPGQNGEPGGKGERGAPGEKGEGGPP 839
>BC028178-1|AAH28178.1| 1163|Homo sapiens COL3A1 protein protein.
Length = 1163
Score = 36.3 bits (80), Expect = 0.13
Identities = 17/40 (42%), Positives = 20/40 (50%)
Frame = -1
Query: 231 PPFPSG*YSTCHRGGQRNSGYPDGRGEPSTTGHKAPPGPP 112
PP P G ++ H G + GY GEP G PPGPP
Sbjct: 181 PPGPPG--TSGHPGSPGSPGYQGPPGEPGQAGPSGPPGPP 218
Score = 31.5 bits (68), Expect = 3.7
Identities = 14/30 (46%), Positives = 17/30 (56%), Gaps = 3/30 (10%)
Frame = -1
Query: 192 GGQRNSGYPDGRGEPSTTGH---KAPPGPP 112
G ++G P RGEP GH + PPGPP
Sbjct: 357 GSPGSNGAPGQRGEPGPQGHAGAQGPPGPP 386
Score = 30.7 bits (66), Expect = 6.5
Identities = 16/42 (38%), Positives = 19/42 (45%)
Frame = -1
Query: 237 TSPPFPSG*YSTCHRGGQRNSGYPDGRGEPSTTGHKAPPGPP 112
T PP P+G G +G P G+GE G K GPP
Sbjct: 803 TGPPGPAG-----FPGAPGQNGEPGGKGERGAPGEKGEGGPP 839
>AY016295-2|AAL13167.1| 1466|Homo sapiens type III preprocollagen
alpha 1 chain protein.
Length = 1466
Score = 36.3 bits (80), Expect = 0.13
Identities = 17/40 (42%), Positives = 20/40 (50%)
Frame = -1
Query: 231 PPFPSG*YSTCHRGGQRNSGYPDGRGEPSTTGHKAPPGPP 112
PP P G ++ H G + GY GEP G PPGPP
Sbjct: 181 PPGPPG--TSGHPGSPGSPGYQGPPGEPGQAGPSGPPGPP 218
Score = 31.5 bits (68), Expect = 3.7
Identities = 14/30 (46%), Positives = 17/30 (56%), Gaps = 3/30 (10%)
Frame = -1
Query: 192 GGQRNSGYPDGRGEPSTTGH---KAPPGPP 112
G ++G P RGEP GH + PPGPP
Sbjct: 357 GSPGSNGAPGQRGEPGPQGHAGAQGPPGPP 386
Score = 31.1 bits (67), Expect = 5.0
Identities = 18/51 (35%), Positives = 20/51 (39%), Gaps = 1/51 (1%)
Frame = -1
Query: 261 GQGQGKEFTSPPFPSG*YSTCHR-GGQRNSGYPDGRGEPSTTGHKAPPGPP 112
G G PP P G GG +G+P RG P G PGPP
Sbjct: 843 GPPGGSGPAGPPGPQGVKGERGSPGGPGAAGFPGARGLPGPPGSNGNPGPP 893
Score = 30.7 bits (66), Expect = 6.5
Identities = 16/42 (38%), Positives = 19/42 (45%)
Frame = -1
Query: 237 TSPPFPSG*YSTCHRGGQRNSGYPDGRGEPSTTGHKAPPGPP 112
T PP P+G G +G P G+GE G K GPP
Sbjct: 803 TGPPGPAG-----FPGAPGQNGEPGGKGERGAPGEKGEGGPP 839
>AC066694-1|AAY24164.1| 1466|Homo sapiens unknown protein.
Length = 1466
Score = 36.3 bits (80), Expect = 0.13
Identities = 17/40 (42%), Positives = 20/40 (50%)
Frame = -1
Query: 231 PPFPSG*YSTCHRGGQRNSGYPDGRGEPSTTGHKAPPGPP 112
PP P G ++ H G + GY GEP G PPGPP
Sbjct: 181 PPGPPG--TSGHPGSPGSPGYQGPPGEPGQAGPSGPPGPP 218
Score = 31.5 bits (68), Expect = 3.7
Identities = 14/30 (46%), Positives = 17/30 (56%), Gaps = 3/30 (10%)
Frame = -1
Query: 192 GGQRNSGYPDGRGEPSTTGH---KAPPGPP 112
G ++G P RGEP GH + PPGPP
Sbjct: 357 GSPGSNGAPGQRGEPGPQGHAGAQGPPGPP 386
Score = 31.1 bits (67), Expect = 5.0
Identities = 18/51 (35%), Positives = 20/51 (39%), Gaps = 1/51 (1%)
Frame = -1
Query: 261 GQGQGKEFTSPPFPSG*YSTCHR-GGQRNSGYPDGRGEPSTTGHKAPPGPP 112
G G PP P G GG +G+P RG P G PGPP
Sbjct: 843 GPPGGSGPAGPPGPQGVKGERGSPGGPGAAGFPGARGLPGPPGSNGNPGPP 893
Score = 30.7 bits (66), Expect = 6.5
Identities = 16/42 (38%), Positives = 19/42 (45%)
Frame = -1
Query: 237 TSPPFPSG*YSTCHRGGQRNSGYPDGRGEPSTTGHKAPPGPP 112
T PP P+G G +G P G+GE G K GPP
Sbjct: 803 TGPPGPAG-----FPGAPGQNGEPGGKGERGAPGEKGEGGPP 839
>AL354664-1|CAH71310.1| 3063|Homo sapiens collagen type XII alpha 1
protein.
Length = 3063
Score = 35.1 bits (77), Expect = 0.30
Identities = 17/50 (34%), Positives = 21/50 (42%)
Frame = -1
Query: 261 GQGQGKEFTSPPFPSG*YSTCHRGGQRNSGYPDGRGEPSTTGHKAPPGPP 112
G + PP P G T G + G P G P +G + PPGPP
Sbjct: 2992 GSSGPRGLPGPPGPQGESRTGPPGSTGSRGPPGPPGRPGNSGIRGPPGPP 3041
>AL096771-4|CAM28081.1| 317|Homo sapiens collagen type XII alpha 1
protein.
Length = 317
Score = 35.1 bits (77), Expect = 0.30
Identities = 17/50 (34%), Positives = 21/50 (42%)
Frame = -1
Query: 261 GQGQGKEFTSPPFPSG*YSTCHRGGQRNSGYPDGRGEPSTTGHKAPPGPP 112
G + PP P G T G + G P G P +G + PPGPP
Sbjct: 191 GSSGPRGLPGPPGPQGESRTGPPGSTGSRGPPGPPGRPGNSGIRGPPGPP 240
>AL096771-3|CAI19908.1| 3063|Homo sapiens collagen type XII alpha 1
protein.
Length = 3063
Score = 35.1 bits (77), Expect = 0.30
Identities = 17/50 (34%), Positives = 21/50 (42%)
Frame = -1
Query: 261 GQGQGKEFTSPPFPSG*YSTCHRGGQRNSGYPDGRGEPSTTGHKAPPGPP 112
G + PP P G T G + G P G P +G + PPGPP
Sbjct: 2992 GSSGPRGLPGPPGPQGESRTGPPGSTGSRGPPGPPGRPGNSGIRGPPGPP 3041
>AL080250-2|CAI19898.1| 3063|Homo sapiens collagen type XII alpha 1
protein.
Length = 3063
Score = 35.1 bits (77), Expect = 0.30
Identities = 17/50 (34%), Positives = 21/50 (42%)
Frame = -1
Query: 261 GQGQGKEFTSPPFPSG*YSTCHRGGQRNSGYPDGRGEPSTTGHKAPPGPP 112
G + PP P G T G + G P G P +G + PPGPP
Sbjct: 2992 GSSGPRGLPGPPGPQGESRTGPPGSTGSRGPPGPPGRPGNSGIRGPPGPP 3041
>AK127166-1|BAC86864.1| 131|Homo sapiens protein ( Homo sapiens
cDNA FLJ45231 fis, clone BRCAN2021452. ).
Length = 131
Score = 35.1 bits (77), Expect = 0.30
Identities = 15/46 (32%), Positives = 22/46 (47%), Gaps = 5/46 (10%)
Frame = -2
Query: 572 PSRGPAQCHRCQAFGHASNNCHRAVR-----CVRCAGEHIVADCPR 450
P P C +C G+ N+C ++R C C G+H DCP+
Sbjct: 59 PKDAPVNCDKCGKPGNVKNDCPGSMRKPARPCPICGGDHWRVDCPQ 104
>U73778-1|AAC51244.1| 3063|Homo sapiens collagen type XII alpha-1
protein.
Length = 3063
Score = 34.7 bits (76), Expect = 0.40
Identities = 17/50 (34%), Positives = 21/50 (42%)
Frame = -1
Query: 261 GQGQGKEFTSPPFPSG*YSTCHRGGQRNSGYPDGRGEPSTTGHKAPPGPP 112
G + PP P G T G + G P G P +G + PPGPP
Sbjct: 2992 GSSGPRGLPGPPGPQGESRTGPPGSTGSRGPPGPPGRPGNSGIQGPPGPP 3041
>BC110812-1|AAI10813.1| 238|Homo sapiens complement component 1, q
subcomponent-like 4 protein.
Length = 238
Score = 34.3 bits (75), Expect = 0.53
Identities = 19/50 (38%), Positives = 21/50 (42%), Gaps = 4/50 (8%)
Frame = -1
Query: 249 GKEFTSPPFPSG*YSTCHRGGQRN----SGYPDGRGEPSTTGHKAPPGPP 112
G + PPFP G R G+ G P RG P G PPGPP
Sbjct: 44 GAPASVPPFPPGAKGEVGRRGKAGLRGPPGPPGPRGPPGEPGRPGPPGPP 93
>BC009326-1|AAH09326.2| 595|Homo sapiens SCARF2 protein protein.
Length = 595
Score = 34.3 bits (75), Expect = 0.53
Identities = 24/71 (33%), Positives = 29/71 (40%), Gaps = 10/71 (14%)
Frame = -2
Query: 563 GPAQCHRCQAF--GHASNNCHRAVRCVRC----AGEHIVADCPRPREGP---FICANCGK 411
G HRC GHA N H +C RC G+ C G F+CA+CG
Sbjct: 53 GEGCSHRCPPCRDGHACN--HVTGKCTRCNAGWIGDRCETKCSNGTYGEDCAFVCADCGS 110
Query: 410 GHAAVDK-RCV 381
GH RC+
Sbjct: 111 GHCDFQSGRCL 121
>AF522196-1|AAN45861.1| 870|Homo sapiens scavenger receptor type F
protein.
Length = 870
Score = 34.3 bits (75), Expect = 0.53
Identities = 24/71 (33%), Positives = 29/71 (40%), Gaps = 10/71 (14%)
Frame = -2
Query: 563 GPAQCHRCQAF--GHASNNCHRAVRCVRC----AGEHIVADCPRPREGP---FICANCGK 411
G HRC GHA N H +C RC G+ C G F+CA+CG
Sbjct: 324 GEGCSHRCPPCRDGHACN--HVTGKCTRCNAGWIGDRCETKCSNGTYGEDCAFVCADCGS 381
Query: 410 GHAAVDK-RCV 381
GH RC+
Sbjct: 382 GHCDFQSGRCL 392
>AF024700-1|AAB81090.1| 66|Homo sapiens zinc finger protein
protein.
Length = 66
Score = 34.3 bits (75), Expect = 0.53
Identities = 19/64 (29%), Positives = 30/64 (46%), Gaps = 14/64 (21%)
Frame = -2
Query: 560 PAQCHRC-QAFGHASNNCH--------RAVRCVRCA-----GEHIVADCPRPREGPFICA 423
P +C++C +AF +SN+ H + CV C H++ P E P+ C+
Sbjct: 1 PHECNQCGKAFNRSSNHIHHQKVHTGEKPYTCVECGKAFSQSSHLIQHQIHPHERPYKCS 60
Query: 422 NCGK 411
CGK
Sbjct: 61 ECGK 64
>AB052951-1|BAC53753.1| 866|Homo sapiens SRECRP-1 protein.
Length = 866
Score = 34.3 bits (75), Expect = 0.53
Identities = 24/71 (33%), Positives = 29/71 (40%), Gaps = 10/71 (14%)
Frame = -2
Query: 563 GPAQCHRCQAF--GHASNNCHRAVRCVRC----AGEHIVADCPRPREGP---FICANCGK 411
G HRC GHA N H +C RC G+ C G F+CA+CG
Sbjct: 324 GEGCSHRCPPCRDGHACN--HVTGKCTRCNAGWIGDRCETKCSNGTYGEDCAFVCADCGS 381
Query: 410 GHAAVDK-RCV 381
GH RC+
Sbjct: 382 GHCDFQSGRCL 392
>AB024433-1|BAD93345.1| 866|Homo sapiens NSR1 protein.
Length = 866
Score = 34.3 bits (75), Expect = 0.53
Identities = 24/71 (33%), Positives = 29/71 (40%), Gaps = 10/71 (14%)
Frame = -2
Query: 563 GPAQCHRCQAF--GHASNNCHRAVRCVRC----AGEHIVADCPRPREGP---FICANCGK 411
G HRC GHA N H +C RC G+ C G F+CA+CG
Sbjct: 324 GEGCSHRCPPCRDGHACN--HVTGKCTRCNAGWIGDRCETKCSNGTYGEDCAFVCADCGS 381
Query: 410 GHAAVDK-RCV 381
GH RC+
Sbjct: 382 GHCDFQSGRCL 392
>AL353658-3|CAH72958.1| 872|Homo sapiens KCNQ2 protein.
Length = 872
Score = 33.9 bits (74), Expect = 0.70
Identities = 26/79 (32%), Positives = 37/79 (46%), Gaps = 4/79 (5%)
Frame = -3
Query: 709 IRXKRGRPGLRFLRNPGP-PSPRMTSPACTQLKNCCTCRGCQ---LRDGVQAEDLRSVIA 542
+R + + GL F ++P P PSP SP L CC R Q L+D V + R V A
Sbjct: 394 LRNLKSKSGLAFRKDPPPEPSPSKGSPCRGPLCGCCPGRSSQKVSLKDRVFSSP-RGV-A 451
Query: 541 ARPSDTPPTTATEQSAACD 485
A+ +P +S + D
Sbjct: 452 AKGKGSPQAQTVRRSPSAD 470
>AL121829-3|CAI95740.1| 872|Homo sapiens KCNQ2 protein.
Length = 872
Score = 33.9 bits (74), Expect = 0.70
Identities = 26/79 (32%), Positives = 37/79 (46%), Gaps = 4/79 (5%)
Frame = -3
Query: 709 IRXKRGRPGLRFLRNPGP-PSPRMTSPACTQLKNCCTCRGCQ---LRDGVQAEDLRSVIA 542
+R + + GL F ++P P PSP SP L CC R Q L+D V + R V A
Sbjct: 394 LRNLKSKSGLAFRKDPPPEPSPSKGSPCRGPLCGCCPGRSSQKVSLKDRVFSSP-RGV-A 451
Query: 541 ARPSDTPPTTATEQSAACD 485
A+ +P +S + D
Sbjct: 452 AKGKGSPQAQTVRRSPSAD 470
>AF033348-1|AAB97315.1| 872|Homo sapiens potassium channel protein.
Length = 872
Score = 33.9 bits (74), Expect = 0.70
Identities = 26/79 (32%), Positives = 37/79 (46%), Gaps = 4/79 (5%)
Frame = -3
Query: 709 IRXKRGRPGLRFLRNPGP-PSPRMTSPACTQLKNCCTCRGCQ---LRDGVQAEDLRSVIA 542
+R + + GL F ++P P PSP SP L CC R Q L+D V + R V A
Sbjct: 394 LRNLKSKSGLAFRKDPPPEPSPSKGSPCRGPLCGCCPGRSSQKVSLKDRVFSSP-RGV-A 451
Query: 541 ARPSDTPPTTATEQSAACD 485
A+ +P +S + D
Sbjct: 452 AKGKGSPQAQTVRRSPSAD 470
>X80031-1|CAA56335.1| 1670|Homo sapiens type IV collagen alpha 3 chain
protein.
Length = 1670
Score = 33.5 bits (73), Expect = 0.93
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = -1
Query: 231 PPFPSG*YSTCHRGGQRNSGYPDGRGEPSTTGHKAPPG 118
PP P G + +G + + G+P +G P T G PPG
Sbjct: 1255 PPGPPGSHVIGIKGDKGSMGHPGPKGPPGTAGDMGPPG 1292
>X57010-1|CAA40330.1| 243|Homo sapiens collagen II alpha 1 chain
protein.
Length = 243
Score = 33.5 bits (73), Expect = 0.93
Identities = 14/27 (51%), Positives = 18/27 (66%), Gaps = 1/27 (3%)
Frame = -1
Query: 189 GQRNSGYPDGR-GEPSTTGHKAPPGPP 112
G++ + P GR GEP T G+ PPGPP
Sbjct: 43 GEKGAPGPRGRDGEPGTPGNPGPPGPP 69
Score = 30.7 bits (66), Expect = 6.5
Identities = 16/40 (40%), Positives = 20/40 (50%)
Frame = -1
Query: 231 PPFPSG*YSTCHRGGQRNSGYPDGRGEPSTTGHKAPPGPP 112
PP P+G + +G Q N G P G G + PPGPP
Sbjct: 113 PPGPAG--APGPQGFQGNPGEPGEPGVSGPMGPRGPPGPP 150
>X16711-1|CAA34683.1| 1160|Homo sapiens COL2A1 protein.
Length = 1160
Score = 33.5 bits (73), Expect = 0.93
Identities = 14/27 (51%), Positives = 18/27 (66%), Gaps = 1/27 (3%)
Frame = -1
Query: 189 GQRNSGYPDGR-GEPSTTGHKAPPGPP 112
G++ + P GR GEP T G+ PPGPP
Sbjct: 72 GEKGAPGPRGRDGEPGTPGNPGPPGPP 98
Score = 30.7 bits (66), Expect = 6.5
Identities = 16/40 (40%), Positives = 20/40 (50%)
Frame = -1
Query: 231 PPFPSG*YSTCHRGGQRNSGYPDGRGEPSTTGHKAPPGPP 112
PP P+G + +G Q N G P G G + PPGPP
Sbjct: 142 PPGPAG--APGPQGFQGNPGEPGEPGVSGPMGPRGPPGPP 179
Score = 30.7 bits (66), Expect = 6.5
Identities = 16/38 (42%), Positives = 19/38 (50%)
Frame = -1
Query: 231 PPFPSG*YSTCHRGGQRNSGYPDGRGEPSTTGHKAPPG 118
PP PSG +G + +SG P GEP G PPG
Sbjct: 850 PPGPSG--KDGPKGARGDSGPPGRAGEPGLQGPAGPPG 885
>X16468-1|CAA34488.1| 1418|Homo sapiens protein ( Human mRNA for
alpha-1 type II collagen. ).
Length = 1418
Score = 33.5 bits (73), Expect = 0.93
Identities = 14/27 (51%), Positives = 18/27 (66%), Gaps = 1/27 (3%)
Frame = -1
Query: 189 GQRNSGYPDGR-GEPSTTGHKAPPGPP 112
G++ + P GR GEP T G+ PPGPP
Sbjct: 72 GEKGAPGPRGRDGEPGTLGNPGPPGPP 98
Score = 30.7 bits (66), Expect = 6.5
Identities = 16/40 (40%), Positives = 20/40 (50%)
Frame = -1
Query: 231 PPFPSG*YSTCHRGGQRNSGYPDGRGEPSTTGHKAPPGPP 112
PP P+G + +G Q N G P G G + PPGPP
Sbjct: 142 PPGPAG--APGPQGFQGNPGEPGEPGVSGPMGPRGPPGPP 179
Score = 30.7 bits (66), Expect = 6.5
Identities = 16/38 (42%), Positives = 19/38 (50%)
Frame = -1
Query: 231 PPFPSG*YSTCHRGGQRNSGYPDGRGEPSTTGHKAPPG 118
PP PSG +G + +SG P GEP G PPG
Sbjct: 850 PPGPSG--KDGPKGARGDSGPPGRAGEPGLQGPAGPPG 885
>M59819-1|AAA63177.1| 771|Homo sapiens granulocyte
colony-stimulating factor receptor protein.
Length = 771
Score = 33.5 bits (73), Expect = 0.93
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = +1
Query: 487 RTQRTARWQLLEACPKAWQR*HCAGPRLGRHPS 585
+TQ TA W CP++W+R + P L RHPS
Sbjct: 634 QTQLTAAWA--PGCPQSWRRMPSSCPALARHPS 664
Score = 31.1 bits (67), Expect = 5.0
Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Frame = +2
Query: 509 GSCWRRVRRPGSDDTAQVLGLDAIPQLTPPASTAVLQLRTSG-RXHPWRRW 658
GSCW + G + V L + +PPA + +RTSG R PW W
Sbjct: 724 GSCWAAPQAQGQGTISAVTPLSPSWRASPPAPS---PMRTSGSRPAPWGPW 771
>M25730-1|AAA58428.2| 167|Homo sapiens alpha-1 type II collagen
protein.
Length = 167
Score = 33.5 bits (73), Expect = 0.93
Identities = 14/27 (51%), Positives = 18/27 (66%), Gaps = 1/27 (3%)
Frame = -1
Query: 189 GQRNSGYPDGR-GEPSTTGHKAPPGPP 112
G++ + P GR GEP T G+ PPGPP
Sbjct: 72 GEKGAPGPRGRDGEPGTPGNPGPPGPP 98
>L10347-1|AAC41772.1| 1487|Homo sapiens alpha-1 type II collagen
protein.
Length = 1487
Score = 33.5 bits (73), Expect = 0.93
Identities = 14/27 (51%), Positives = 18/27 (66%), Gaps = 1/27 (3%)
Frame = -1
Query: 189 GQRNSGYPDGR-GEPSTTGHKAPPGPP 112
G++ + P GR GEP T G+ PPGPP
Sbjct: 141 GEKGAPGPRGRDGEPGTPGNPGPPGPP 167
Score = 30.7 bits (66), Expect = 6.5
Identities = 16/40 (40%), Positives = 20/40 (50%)
Frame = -1
Query: 231 PPFPSG*YSTCHRGGQRNSGYPDGRGEPSTTGHKAPPGPP 112
PP P+G + +G Q N G P G G + PPGPP
Sbjct: 211 PPGPAG--APGPQGFQGNPGEPGEPGVSGPMGPRGPPGPP 248
Score = 30.7 bits (66), Expect = 6.5
Identities = 16/38 (42%), Positives = 19/38 (50%)
Frame = -1
Query: 231 PPFPSG*YSTCHRGGQRNSGYPDGRGEPSTTGHKAPPG 118
PP PSG +G + +SG P GEP G PPG
Sbjct: 919 PPGPSG--KDGPKGARGDSGPPGRAGEPGLQGPAGPPG 954
>BC116449-1|AAI16450.1| 1487|Homo sapiens collagen, type II, alpha 1
(primary osteoarthritis, spondyloepiphyseal dysplasi
protein.
Length = 1487
Score = 33.5 bits (73), Expect = 0.93
Identities = 14/27 (51%), Positives = 18/27 (66%), Gaps = 1/27 (3%)
Frame = -1
Query: 189 GQRNSGYPDGR-GEPSTTGHKAPPGPP 112
G++ + P GR GEP T G+ PPGPP
Sbjct: 141 GEKGAPGPRGRDGEPGTPGNPGPPGPP 167
Score = 30.7 bits (66), Expect = 6.5
Identities = 16/40 (40%), Positives = 20/40 (50%)
Frame = -1
Query: 231 PPFPSG*YSTCHRGGQRNSGYPDGRGEPSTTGHKAPPGPP 112
PP P+G + +G Q N G P G G + PPGPP
Sbjct: 211 PPGPAG--APGPQGFQGNPGEPGEPGVSGPMGPRGPPGPP 248
Score = 30.7 bits (66), Expect = 6.5
Identities = 16/38 (42%), Positives = 19/38 (50%)
Frame = -1
Query: 231 PPFPSG*YSTCHRGGQRNSGYPDGRGEPSTTGHKAPPG 118
PP PSG +G + +SG P GEP G PPG
Sbjct: 919 PPGPSG--KDGPKGARGDSGPPGRAGEPGLQGPAGPPG 954
>AJ288487-1|CAC36101.1| 1670|Homo sapiens alpha3 type IV collagen
protein.
Length = 1670
Score = 33.5 bits (73), Expect = 0.93
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = -1
Query: 231 PPFPSG*YSTCHRGGQRNSGYPDGRGEPSTTGHKAPPG 118
PP P G + +G + + G+P +G P T G PPG
Sbjct: 1255 PPGPPGSHVIGIKGDKGSMGHPGPKGPPGTAGDMGPPG 1292
>AC097662-1|AAY24251.1| 1084|Homo sapiens unknown protein.
Length = 1084
Score = 33.5 bits (73), Expect = 0.93
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = -1
Query: 231 PPFPSG*YSTCHRGGQRNSGYPDGRGEPSTTGHKAPPG 118
PP P G + +G + + G+P +G P T G PPG
Sbjct: 669 PPGPPGSHVIGIKGDKGSMGHPGPKGPPGTAGDMGPPG 706
>Y00706-1|CAA68698.1| 1212|Homo sapiens protein ( Human mRNA for
alpha1 chain of basement membrane (type IV) collagen.in
neoplastic tissue). ).
Length = 1212
Score = 33.1 bits (72), Expect = 1.2
Identities = 14/28 (50%), Positives = 14/28 (50%)
Frame = -1
Query: 195 RGGQRNSGYPDGRGEPSTTGHKAPPGPP 112
RG SGYP G P G PPGPP
Sbjct: 48 RGPPGASGYPGNPGLPGIPGQDGPPGPP 75
Score = 31.5 bits (68), Expect = 3.7
Identities = 15/40 (37%), Positives = 18/40 (45%)
Frame = -1
Query: 237 TSPPFPSG*YSTCHRGGQRNSGYPDGRGEPSTTGHKAPPG 118
T PP P G G + +G+P G G P G K PG
Sbjct: 555 TGPPGPPGYGPAGPIGDKGQAGFPGGPGSPGLPGPKGEPG 594
>X05561-1|CAA29075.1| 944|Homo sapiens protein ( Human mRNA for
alpha-1 chain of collagen IV N-terminus. ).
Length = 944
Score = 33.1 bits (72), Expect = 1.2
Identities = 14/28 (50%), Positives = 14/28 (50%)
Frame = -1
Query: 195 RGGQRNSGYPDGRGEPSTTGHKAPPGPP 112
RG SGYP G P G PPGPP
Sbjct: 93 RGPPGASGYPGNPGLPGIPGQDGPPGPP 120
Score = 31.5 bits (68), Expect = 3.7
Identities = 15/40 (37%), Positives = 18/40 (45%)
Frame = -1
Query: 237 TSPPFPSG*YSTCHRGGQRNSGYPDGRGEPSTTGHKAPPG 118
T PP P G G + +G+P G G P G K PG
Sbjct: 600 TGPPGPPGYGPAGPIGDKGQAGFPGGPGSPGLPGPKGEPG 639
>M26576-1|AAA53098.1| 1669|Homo sapiens alpha-1 type IV collagen
protein.
Length = 1669
Score = 33.1 bits (72), Expect = 1.2
Identities = 14/28 (50%), Positives = 14/28 (50%)
Frame = -1
Query: 195 RGGQRNSGYPDGRGEPSTTGHKAPPGPP 112
RG SGYP G P G PPGPP
Sbjct: 93 RGPPGASGYPGNPGLPGIPGQDGPPGPP 120
Score = 31.5 bits (68), Expect = 3.7
Identities = 15/40 (37%), Positives = 18/40 (45%)
Frame = -1
Query: 237 TSPPFPSG*YSTCHRGGQRNSGYPDGRGEPSTTGHKAPPG 118
T PP P G G + +G+P G G P G K PG
Sbjct: 600 TGPPGPPGYGPAGPIGDKGQAGFPGGPGSPGLPGPKGEPG 639
>BC151220-1|AAI51221.1| 1669|Homo sapiens COL4A1 protein protein.
Length = 1669
Score = 33.1 bits (72), Expect = 1.2
Identities = 14/28 (50%), Positives = 14/28 (50%)
Frame = -1
Query: 195 RGGQRNSGYPDGRGEPSTTGHKAPPGPP 112
RG SGYP G P G PPGPP
Sbjct: 93 RGPPGASGYPGNPGLPGIPGQDGPPGPP 120
Score = 31.5 bits (68), Expect = 3.7
Identities = 15/40 (37%), Positives = 18/40 (45%)
Frame = -1
Query: 237 TSPPFPSG*YSTCHRGGQRNSGYPDGRGEPSTTGHKAPPG 118
T PP P G G + +G+P G G P G K PG
Sbjct: 600 TGPPGPPGYGPAGPIGDKGQAGFPGGPGSPGLPGPKGEPG 639
>BC142626-1|AAI42627.1| 519|Homo sapiens COL4A1 protein protein.
Length = 519
Score = 33.1 bits (72), Expect = 1.2
Identities = 14/28 (50%), Positives = 14/28 (50%)
Frame = -1
Query: 195 RGGQRNSGYPDGRGEPSTTGHKAPPGPP 112
RG SGYP G P G PPGPP
Sbjct: 93 RGPPGASGYPGNPGLPGIPGQDGPPGPP 120
>BC005990-1|AAH05990.1| 405|Homo sapiens Unknown (protein for
IMAGE:4046616) protein.
Length = 405
Score = 33.1 bits (72), Expect = 1.2
Identities = 19/62 (30%), Positives = 27/62 (43%), Gaps = 4/62 (6%)
Frame = -2
Query: 551 CHRCQAFGHASNNC---HRAVRCVRCAGE-HIVADCPRPREGPFICANCGKGHAAVDKRC 384
C C GH S NC + RC C+ H++ CP P +C C +D+ C
Sbjct: 243 CRNCDKRGHLSKNCPLPRKVRRCFLCSRRGHLLYSCPAP-----LCEYC-PVPKMLDRSC 296
Query: 383 VF 378
+F
Sbjct: 297 LF 298
>AL390755-2|CAM20295.1| 1318|Homo sapiens collagen type IV alpha 1
protein.
Length = 1318
Score = 33.1 bits (72), Expect = 1.2
Identities = 14/28 (50%), Positives = 14/28 (50%)
Frame = -1
Query: 195 RGGQRNSGYPDGRGEPSTTGHKAPPGPP 112
RG SGYP G P G PPGPP
Sbjct: 93 RGPPGASGYPGNPGLPGIPGQDGPPGPP 120
>AL390755-1|CAH74130.1| 1669|Homo sapiens collagen type IV alpha 1
protein.
Length = 1669
Score = 33.1 bits (72), Expect = 1.2
Identities = 14/28 (50%), Positives = 14/28 (50%)
Frame = -1
Query: 195 RGGQRNSGYPDGRGEPSTTGHKAPPGPP 112
RG SGYP G P G PPGPP
Sbjct: 93 RGPPGASGYPGNPGLPGIPGQDGPPGPP 120
Score = 31.5 bits (68), Expect = 3.7
Identities = 15/40 (37%), Positives = 18/40 (45%)
Frame = -1
Query: 237 TSPPFPSG*YSTCHRGGQRNSGYPDGRGEPSTTGHKAPPG 118
T PP P G G + +G+P G G P G K PG
Sbjct: 600 TGPPGPPGYGPAGPIGDKGQAGFPGGPGSPGLPGPKGEPG 639
>AL161773-2|CAM14222.1| 1318|Homo sapiens collagen type IV alpha 1
protein.
Length = 1318
Score = 33.1 bits (72), Expect = 1.2
Identities = 14/28 (50%), Positives = 14/28 (50%)
Frame = -1
Query: 195 RGGQRNSGYPDGRGEPSTTGHKAPPGPP 112
RG SGYP G P G PPGPP
Sbjct: 93 RGPPGASGYPGNPGLPGIPGQDGPPGPP 120
>AL161773-1|CAH71365.1| 1669|Homo sapiens collagen type IV alpha 1
protein.
Length = 1669
Score = 33.1 bits (72), Expect = 1.2
Identities = 14/28 (50%), Positives = 14/28 (50%)
Frame = -1
Query: 195 RGGQRNSGYPDGRGEPSTTGHKAPPGPP 112
RG SGYP G P G PPGPP
Sbjct: 93 RGPPGASGYPGNPGLPGIPGQDGPPGPP 120
Score = 31.5 bits (68), Expect = 3.7
Identities = 15/40 (37%), Positives = 18/40 (45%)
Frame = -1
Query: 237 TSPPFPSG*YSTCHRGGQRNSGYPDGRGEPSTTGHKAPPG 118
T PP P G G + +G+P G G P G K PG
Sbjct: 600 TGPPGPPGYGPAGPIGDKGQAGFPGGPGSPGLPGPKGEPG 639
>U04520-2|AAC27816.1| 1685|Homo sapiens type IV collagen alpha 5
chain protein.
Length = 1685
Score = 32.7 bits (71), Expect = 1.6
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = -1
Query: 180 NSGYPDGRGEPSTTGHKAPPGPPFNQQG 97
+ G P RG P G + PPGPP ++G
Sbjct: 259 DQGLPGDRGPPGPPGIRGPPGPPGGEKG 286
>U04520-1|AAF66217.2| 1691|Homo sapiens type IV collagen alpha 5
chain protein.
Length = 1691
Score = 32.7 bits (71), Expect = 1.6
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = -1
Query: 180 NSGYPDGRGEPSTTGHKAPPGPPFNQQG 97
+ G P RG P G + PPGPP ++G
Sbjct: 259 DQGLPGDRGPPGPPGIRGPPGPPGGEKG 286
>M90464-1|AAA52046.1| 910|Homo sapiens alpha-5 type IV collagen
protein.
Length = 910
Score = 32.7 bits (71), Expect = 1.6
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = -1
Query: 180 NSGYPDGRGEPSTTGHKAPPGPPFNQQG 97
+ G P RG P G + PPGPP ++G
Sbjct: 259 DQGLPGDRGPPGPPGIRGPPGPPGGEKG 286
>M58526-1|AAA99480.1| 1604|Homo sapiens alpha-5 type IV collagen
protein.
Length = 1604
Score = 32.7 bits (71), Expect = 1.6
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = -1
Query: 180 NSGYPDGRGEPSTTGHKAPPGPPFNQQG 97
+ G P RG P G + PPGPP ++G
Sbjct: 178 DQGLPGDRGPPGPPGIRGPPGPPGGEKG 205
>BC021176-1|AAH21176.1| 166|Homo sapiens zinc finger, CCHC domain
containing 13 protein.
Length = 166
Score = 32.7 bits (71), Expect = 1.6
Identities = 21/65 (32%), Positives = 30/65 (46%), Gaps = 5/65 (7%)
Frame = -2
Query: 572 PSRGPAQ-CHRCQAFGHASNNCHR--AVRCVRCAG-EHIVADCPRPREGPFICANCGK-G 408
P R Q C+ C GH + +C R +C C HI DC + + C CG+ G
Sbjct: 83 PKRERRQHCYTCGRLGHLARDCDRQKEQKCYSCGKLGHIQKDCAQVK-----CYRCGEIG 137
Query: 407 HAAVD 393
H A++
Sbjct: 138 HVAIN 142
>AL512408-3|CAI23484.1| 2285|Homo sapiens AT rich interactive domain
1A (SWI-like) protein.
Length = 2285
Score = 32.7 bits (71), Expect = 1.6
Identities = 16/42 (38%), Positives = 22/42 (52%)
Frame = -1
Query: 222 PSG*YSTCHRGGQRNSGYPDGRGEPSTTGHKAPPGPPFNQQG 97
P G Y ++GG +G P G+G S G P GPP++ G
Sbjct: 912 PPG-YPNMNQGGMMGTGPPYGQGINSMAGMINPQGPPYSMGG 952
>AL512408-2|CAI23483.1| 1175|Homo sapiens AT rich interactive domain
1A (SWI-like) protein.
Length = 1175
Score = 32.7 bits (71), Expect = 1.6
Identities = 16/42 (38%), Positives = 22/42 (52%)
Frame = -1
Query: 222 PSG*YSTCHRGGQRNSGYPDGRGEPSTTGHKAPPGPPFNQQG 97
P G Y ++GG +G P G+G S G P GPP++ G
Sbjct: 529 PPG-YPNMNQGGMMGTGPPYGQGINSMAGMINPQGPPYSMGG 569
>AL512408-1|CAI23482.1| 1685|Homo sapiens AT rich interactive domain
1A (SWI-like) protein.
Length = 1685
Score = 32.7 bits (71), Expect = 1.6
Identities = 16/42 (38%), Positives = 22/42 (52%)
Frame = -1
Query: 222 PSG*YSTCHRGGQRNSGYPDGRGEPSTTGHKAPPGPPFNQQG 97
P G Y ++GG +G P G+G S G P GPP++ G
Sbjct: 529 PPG-YPNMNQGGMMGTGPPYGQGINSMAGMINPQGPPYSMGG 569
>AL353658-1|CAH72955.1| 436|Homo sapiens KCNQ2 protein.
Length = 436
Score = 32.7 bits (71), Expect = 1.6
Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = -3
Query: 709 IRXKRGRPGLRFLRNPGP-PSPRMTSPACTQLKNCCT 602
+R + + GL F ++P P PSPR PA T + CT
Sbjct: 384 LRNLKSKSGLAFRKDPPPEPSPRSVPPAATLVSAVCT 420
>AL121829-1|CAI95738.1| 436|Homo sapiens KCNQ2 protein.
Length = 436
Score = 32.7 bits (71), Expect = 1.6
Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = -3
Query: 709 IRXKRGRPGLRFLRNPGP-PSPRMTSPACTQLKNCCT 602
+R + + GL F ++P P PSPR PA T + CT
Sbjct: 384 LRNLKSKSGLAFRKDPPPEPSPRSVPPAATLVSAVCT 420
>AL035425-1|CAB90289.2| 1685|Homo sapiens collagen type IV alpha 5
protein.
Length = 1685
Score = 32.7 bits (71), Expect = 1.6
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = -1
Query: 180 NSGYPDGRGEPSTTGHKAPPGPPFNQQG 97
+ G P RG P G + PPGPP ++G
Sbjct: 259 DQGLPGDRGPPGPPGIRGPPGPPGGEKG 286
>AL034380-9|CAI21623.1| 2285|Homo sapiens AT rich interactive domain
1A (SWI-like) protein.
Length = 2285
Score = 32.7 bits (71), Expect = 1.6
Identities = 16/42 (38%), Positives = 22/42 (52%)
Frame = -1
Query: 222 PSG*YSTCHRGGQRNSGYPDGRGEPSTTGHKAPPGPPFNQQG 97
P G Y ++GG +G P G+G S G P GPP++ G
Sbjct: 912 PPG-YPNMNQGGMMGTGPPYGQGINSMAGMINPQGPPYSMGG 952
>AL034380-7|CAI21622.1| 1175|Homo sapiens AT rich interactive domain
1A (SWI-like) protein.
Length = 1175
Score = 32.7 bits (71), Expect = 1.6
Identities = 16/42 (38%), Positives = 22/42 (52%)
Frame = -1
Query: 222 PSG*YSTCHRGGQRNSGYPDGRGEPSTTGHKAPPGPPFNQQG 97
P G Y ++GG +G P G+G S G P GPP++ G
Sbjct: 529 PPG-YPNMNQGGMMGTGPPYGQGINSMAGMINPQGPPYSMGG 569
>AL034380-6|CAI21621.1| 1685|Homo sapiens AT rich interactive domain
1A (SWI-like) protein.
Length = 1685
Score = 32.7 bits (71), Expect = 1.6
Identities = 16/42 (38%), Positives = 22/42 (52%)
Frame = -1
Query: 222 PSG*YSTCHRGGQRNSGYPDGRGEPSTTGHKAPPGPPFNQQG 97
P G Y ++GG +G P G+G S G P GPP++ G
Sbjct: 529 PPG-YPNMNQGGMMGTGPPYGQGINSMAGMINPQGPPYSMGG 569
>AL034369-4|CAA22267.2| 1685|Homo sapiens collagen type IV alpha 5
protein.
Length = 1685
Score = 32.7 bits (71), Expect = 1.6
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = -1
Query: 180 NSGYPDGRGEPSTTGHKAPPGPPFNQQG 97
+ G P RG P G + PPGPP ++G
Sbjct: 259 DQGLPGDRGPPGPPGIRGPPGPPGGEKG 286
>AL031622-1|CAI43038.1| 1685|Homo sapiens collagen type IV alpha 5
protein.
Length = 1685
Score = 32.7 bits (71), Expect = 1.6
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = -1
Query: 180 NSGYPDGRGEPSTTGHKAPPGPPFNQQG 97
+ G P RG P G + PPGPP ++G
Sbjct: 259 DQGLPGDRGPPGPPGIRGPPGPPGGEKG 286
>AF521670-1|AAN03446.1| 1999|Homo sapiens SWI/SNF chromatin
remodeling complex subunit OSA1 protein.
Length = 1999
Score = 32.7 bits (71), Expect = 1.6
Identities = 16/42 (38%), Positives = 22/42 (52%)
Frame = -1
Query: 222 PSG*YSTCHRGGQRNSGYPDGRGEPSTTGHKAPPGPPFNQQG 97
P G Y ++GG +G P G+G S G P GPP++ G
Sbjct: 626 PPG-YPNMNQGGMMGTGPPYGQGINSMAGMINPQGPPYSMGG 666
>AF268913-1|AAK54505.1| 1685|Homo sapiens OSA1 nuclear protein
protein.
Length = 1685
Score = 32.7 bits (71), Expect = 1.6
Identities = 16/42 (38%), Positives = 22/42 (52%)
Frame = -1
Query: 222 PSG*YSTCHRGGQRNSGYPDGRGEPSTTGHKAPPGPPFNQQG 97
P G Y ++GG +G P G+G S G P GPP++ G
Sbjct: 529 PPG-YPNMNQGGMMGTGPPYGQGINSMAGMINPQGPPYSMGG 569
>AF265208-1|AAF75765.1| 1927|Homo sapiens SWI-SNF complex protein
p270 protein.
Length = 1927
Score = 32.7 bits (71), Expect = 1.6
Identities = 16/42 (38%), Positives = 22/42 (52%)
Frame = -1
Query: 222 PSG*YSTCHRGGQRNSGYPDGRGEPSTTGHKAPPGPPFNQQG 97
P G Y ++GG +G P G+G S G P GPP++ G
Sbjct: 554 PPG-YPNMNQGGMMGTGPPYGQGINSMAGMINPQGPPYSMGG 594
>AF231056-1|AAG33967.1| 2285|Homo sapiens BRG1-Associated Factor 250a
protein.
Length = 2285
Score = 32.7 bits (71), Expect = 1.6
Identities = 16/42 (38%), Positives = 22/42 (52%)
Frame = -1
Query: 222 PSG*YSTCHRGGQRNSGYPDGRGEPSTTGHKAPPGPPFNQQG 97
P G Y ++GG +G P G+G S G P GPP++ G
Sbjct: 912 PPG-YPNMNQGGMMGTGPPYGQGINSMAGMINPQGPPYSMGG 952
>AF219114-1|AAG17549.2| 1939|Homo sapiens chromatin remodelling
factor p250 protein.
Length = 1939
Score = 32.7 bits (71), Expect = 1.6
Identities = 16/42 (38%), Positives = 22/42 (52%)
Frame = -1
Query: 222 PSG*YSTCHRGGQRNSGYPDGRGEPSTTGHKAPPGPPFNQQG 97
P G Y ++GG +G P G+G S G P GPP++ G
Sbjct: 566 PPG-YPNMNQGGMMGTGPPYGQGINSMAGMINPQGPPYSMGG 606
>AB210022-1|BAE06104.1| 1374|Homo sapiens ARID1A variant protein
protein.
Length = 1374
Score = 32.7 bits (71), Expect = 1.6
Identities = 16/42 (38%), Positives = 22/42 (52%)
Frame = -1
Query: 222 PSG*YSTCHRGGQRNSGYPDGRGEPSTTGHKAPPGPPFNQQG 97
P G Y ++GG +G P G+G S G P GPP++ G
Sbjct: 566 PPG-YPNMNQGGMMGTGPPYGQGINSMAGMINPQGPPYSMGG 606
>AB051293-1|BAB55599.1| 1208|Homo sapiens SWI related protein
protein.
Length = 1208
Score = 32.7 bits (71), Expect = 1.6
Identities = 16/42 (38%), Positives = 22/42 (52%)
Frame = -1
Query: 222 PSG*YSTCHRGGQRNSGYPDGRGEPSTTGHKAPPGPPFNQQG 97
P G Y ++GG +G P G+G S G P GPP++ G
Sbjct: 529 PPG-YPNMNQGGMMGTGPPYGQGINSMAGMINPQGPPYSMGG 569
>AB024075-1|BAA83073.1| 1119|Homo sapiens B120 protein.
Length = 1119
Score = 32.7 bits (71), Expect = 1.6
Identities = 16/42 (38%), Positives = 22/42 (52%)
Frame = -1
Query: 222 PSG*YSTCHRGGQRNSGYPDGRGEPSTTGHKAPPGPPFNQQG 97
P G Y ++GG +G P G+G S G P GPP++ G
Sbjct: 530 PPG-YPNMNQGGMMGTGPPYGQGINSMAGMINPQGPPYSMGG 570
>AB001895-1|BAA23269.1| 1142|Homo sapiens B120 protein.
Length = 1142
Score = 32.7 bits (71), Expect = 1.6
Identities = 16/42 (38%), Positives = 22/42 (52%)
Frame = -1
Query: 222 PSG*YSTCHRGGQRNSGYPDGRGEPSTTGHKAPPGPPFNQQG 97
P G Y ++GG +G P G+G S G P GPP++ G
Sbjct: 529 PPG-YPNMNQGGMMGTGPPYGQGINSMAGMINPQGPPYSMGG 569
>BC014850-1|AAH14850.1| 371|Homo sapiens ZNF607 protein protein.
Length = 371
Score = 32.3 bits (70), Expect = 2.1
Identities = 14/53 (26%), Positives = 23/53 (43%)
Frame = -2
Query: 530 GHASNNCHRAVRCVRCAGEHIVADCPRPREGPFICANCGKGHAAVDKRCVFYR 372
G+ C + RCA ++ + E P++C CGKG + K + R
Sbjct: 120 GYKPFECKECGKSFRCASYLVIHERIHTGEKPYVCQECGKGFSYSHKLTIHRR 172
>AK131559-1|BAD18693.1| 695|Homo sapiens protein ( Homo sapiens
cDNA FLJ16803 fis, clone TESTI4005500, weakly similar
to Zinc finger protein 184. ).
Length = 695
Score = 32.3 bits (70), Expect = 2.1
Identities = 14/53 (26%), Positives = 23/53 (43%)
Frame = -2
Query: 530 GHASNNCHRAVRCVRCAGEHIVADCPRPREGPFICANCGKGHAAVDKRCVFYR 372
G+ C + RCA ++ + E P++C CGKG + K + R
Sbjct: 444 GYKPFECKECGKSFRCASYLVIHERIHTGEKPYVCQECGKGFSYSHKLTIHRR 496
>AK131557-1|BAD18691.1| 696|Homo sapiens protein ( Homo sapiens
cDNA FLJ16799 fis, clone TESTI4002988, moderately
similar to Zinc finger protein 208. ).
Length = 696
Score = 32.3 bits (70), Expect = 2.1
Identities = 14/53 (26%), Positives = 23/53 (43%)
Frame = -2
Query: 530 GHASNNCHRAVRCVRCAGEHIVADCPRPREGPFICANCGKGHAAVDKRCVFYR 372
G+ C + RCA ++ + E P++C CGKG + K + R
Sbjct: 445 GYKPFECKECGKSFRCASYLVIHERIHTGEKPYVCQECGKGFSYSHKLTIHRR 497
>AK027708-1|BAB55313.1| 371|Homo sapiens protein ( Homo sapiens
cDNA FLJ14802 fis, clone NT2RP4001433, moderately
similar to ZINC FINGER PROTEIN 184. ).
Length = 371
Score = 32.3 bits (70), Expect = 2.1
Identities = 14/53 (26%), Positives = 23/53 (43%)
Frame = -2
Query: 530 GHASNNCHRAVRCVRCAGEHIVADCPRPREGPFICANCGKGHAAVDKRCVFYR 372
G+ C + RCA ++ + E P++C CGKG + K + R
Sbjct: 120 GYKPFECKECGKSFRCASYLVIHERIHTGEKPYVCQECGKGFSYSHKLTIHRR 172
>AJ404468-1|CAB94756.1| 4486|Homo sapiens axonemal dynein heavy
chain 9 protein.
Length = 4486
Score = 32.3 bits (70), Expect = 2.1
Identities = 16/53 (30%), Positives = 28/53 (52%)
Frame = +3
Query: 360 PRPPAVEHTPLVNSGVALPAVGADEGSLPWPRAVRHNVLTRTSHAADCSVAVV 518
P P +EH + S V LP + ++ L WP + +V R +H+ C ++V+
Sbjct: 126 PAAP-LEHLAALFSEVVLPVLANEKNRLNWPHMICEDV-RRHAHSLQCDLSVI 176
>AF257737-1|AAF69004.1| 4486|Homo sapiens ciliary dynein heavy chain
9 protein.
Length = 4486
Score = 32.3 bits (70), Expect = 2.1
Identities = 16/53 (30%), Positives = 28/53 (52%)
Frame = +3
Query: 360 PRPPAVEHTPLVNSGVALPAVGADEGSLPWPRAVRHNVLTRTSHAADCSVAVV 518
P P +EH + S V LP + ++ L WP + +V R +H+ C ++V+
Sbjct: 126 PAAP-LEHLAALFSEVVLPVLANEKNRLNWPHMICEDV-RRHAHSLQCDLSVI 176
>AB209242-1|BAD92479.1| 389|Homo sapiens zinc finger protein 607
variant protein.
Length = 389
Score = 32.3 bits (70), Expect = 2.1
Identities = 14/53 (26%), Positives = 23/53 (43%)
Frame = -2
Query: 530 GHASNNCHRAVRCVRCAGEHIVADCPRPREGPFICANCGKGHAAVDKRCVFYR 372
G+ C + RCA ++ + E P++C CGKG + K + R
Sbjct: 138 GYKPFECKECGKSFRCASYLVIHERIHTGEKPYVCQECGKGFSYSHKLTIHRR 190
>S57132-1|AAB25797.1| 1186|Homo sapiens type XVI collagen alpha 1
chain protein.
Length = 1186
Score = 31.9 bits (69), Expect = 2.8
Identities = 17/40 (42%), Positives = 19/40 (47%)
Frame = -1
Query: 231 PPFPSG*YSTCHRGGQRNSGYPDGRGEPSTTGHKAPPGPP 112
PP P+G RG Q NSG +G G PPGPP
Sbjct: 712 PPGPAG--PRGERGPQGNSGEKGDQGFQGQPGFPGPPGPP 749
Score = 31.9 bits (69), Expect = 2.8
Identities = 16/39 (41%), Positives = 18/39 (46%)
Frame = -1
Query: 228 PFPSG*YSTCHRGGQRNSGYPDGRGEPSTTGHKAPPGPP 112
P P G ST G + G +G P GH PPGPP
Sbjct: 845 PGPPG--STGRPGAEGEPGAMGPQGRPGPPGHVGPPGPP 881
Score = 30.3 bits (65), Expect = 8.7
Identities = 18/54 (33%), Positives = 23/54 (42%), Gaps = 4/54 (7%)
Frame = -1
Query: 264 EGQGQGKEFTSPPFPSG*YSTCHRGGQRN----SGYPDGRGEPSTTGHKAPPGP 115
EG + F PP P G + GQ +G P G G+ + G PPGP
Sbjct: 934 EGPPGKQGFYGPPGPKGDPGAAGQKGQAGEKGRAGMPGGPGKSGSMGPVGPPGP 987
>M92642-1|AAA58427.1| 1603|Homo sapiens alpha-1 type XVI collagen
protein.
Length = 1603
Score = 31.9 bits (69), Expect = 2.8
Identities = 16/39 (41%), Positives = 18/39 (46%)
Frame = -1
Query: 228 PFPSG*YSTCHRGGQRNSGYPDGRGEPSTTGHKAPPGPP 112
P P G ST G + G +G P GH PPGPP
Sbjct: 1262 PGPPG--STGRPGAEGEPGAMGPQGRPGPPGHVGPPGPP 1298
Score = 30.3 bits (65), Expect = 8.7
Identities = 18/54 (33%), Positives = 23/54 (42%), Gaps = 4/54 (7%)
Frame = -1
Query: 264 EGQGQGKEFTSPPFPSG*YSTCHRGGQRN----SGYPDGRGEPSTTGHKAPPGP 115
EG + F PP P G + GQ +G P G G+ + G PPGP
Sbjct: 1351 EGPPGKQGFYGPPGPKGDPGAAGQKGQAGEKGRAGMPGGPGKSGSMGPVGPPGP 1404
>BC107584-1|AAI07585.1| 239|Homo sapiens ZCCHC3 protein protein.
Length = 239
Score = 31.9 bits (69), Expect = 2.8
Identities = 13/36 (36%), Positives = 17/36 (47%), Gaps = 1/36 (2%)
Frame = -2
Query: 554 QCHRCQAFGHASNNCHRAVRCVRCAGE-HIVADCPR 450
+C RC GH S C + + C C H A CP+
Sbjct: 188 RCFRCGEEGHLSPYCRKGIVCNLCGKRGHAFAQCPK 223
>BC069238-1|AAH69238.1| 403|Homo sapiens zinc finger, CCHC domain
containing 3 protein.
Length = 403
Score = 31.9 bits (69), Expect = 2.8
Identities = 13/36 (36%), Positives = 17/36 (47%), Gaps = 1/36 (2%)
Frame = -2
Query: 554 QCHRCQAFGHASNNCHRAVRCVRCAGE-HIVADCPR 450
+C RC GH S C + + C C H A CP+
Sbjct: 352 RCFRCGEEGHLSPYCRKGIVCNLCGKRGHAFAQCPK 387
>BC036940-1|AAH36940.1| 542|Homo sapiens ZCCHC7 protein protein.
Length = 542
Score = 31.9 bits (69), Expect = 2.8
Identities = 14/39 (35%), Positives = 18/39 (46%), Gaps = 4/39 (10%)
Frame = -2
Query: 551 CHRCQAFGHASNNC---HRAVRCVRCAGE-HIVADCPRP 447
C C GH S NC + RC C+ H++ CP P
Sbjct: 242 CRNCDKRGHLSKNCPLPRKVRRCFLCSRRGHLLYSCPAP 280
>AY436367-1|AAR11855.1| 54|Homo sapiens cellular nucleic acid
binding protein protein.
Length = 54
Score = 31.9 bits (69), Expect = 2.8
Identities = 13/36 (36%), Positives = 19/36 (52%), Gaps = 3/36 (8%)
Frame = -2
Query: 554 QCHRCQAFGHASNNCHRA--VRCVRCA-GEHIVADC 456
+C+RC GH + NC + V C RC H+ +C
Sbjct: 13 KCYRCGETGHVAINCSKTSEVNCYRCGESGHLAREC 48
>AL512604-1|CAI12725.2| 543|Homo sapiens zinc finger, CCHC domain
containing 7 protein.
Length = 543
Score = 31.9 bits (69), Expect = 2.8
Identities = 14/39 (35%), Positives = 18/39 (46%), Gaps = 4/39 (10%)
Frame = -2
Query: 551 CHRCQAFGHASNNC---HRAVRCVRCAGE-HIVADCPRP 447
C C GH S NC + RC C+ H++ CP P
Sbjct: 243 CRNCDKRGHLSKNCPLPRKVRRCFLCSRRGHLLYSCPAP 281
>AL158155-1|CAI13846.2| 543|Homo sapiens zinc finger, CCHC domain
containing 7 protein.
Length = 543
Score = 31.9 bits (69), Expect = 2.8
Identities = 14/39 (35%), Positives = 18/39 (46%), Gaps = 4/39 (10%)
Frame = -2
Query: 551 CHRCQAFGHASNNC---HRAVRCVRCAGE-HIVADCPRP 447
C C GH S NC + RC C+ H++ CP P
Sbjct: 243 CRNCDKRGHLSKNCPLPRKVRRCFLCSRRGHLLYSCPAP 281
>AL034548-4|CAB81631.1| 404|Homo sapiens zinc finger, CCHC domain
containing 3 protein.
Length = 404
Score = 31.9 bits (69), Expect = 2.8
Identities = 13/36 (36%), Positives = 17/36 (47%), Gaps = 1/36 (2%)
Frame = -2
Query: 554 QCHRCQAFGHASNNCHRAVRCVRCAGE-HIVADCPR 450
+C RC GH S C + + C C H A CP+
Sbjct: 353 RCFRCGEEGHLSPYCRKGIVCNLCGKRGHAFAQCPK 388
>AK074608-1|BAC11087.1| 391|Homo sapiens protein ( Homo sapiens
cDNA FLJ90127 fis, clone HEMBB1000106, weakly similar to
CELLULAR NUCLEIC ACID BINDING PROTEIN. ).
Length = 391
Score = 31.9 bits (69), Expect = 2.8
Identities = 14/39 (35%), Positives = 18/39 (46%), Gaps = 4/39 (10%)
Frame = -2
Query: 551 CHRCQAFGHASNNC---HRAVRCVRCAGE-HIVADCPRP 447
C C GH S NC + RC C+ H++ CP P
Sbjct: 91 CRNCDKRGHLSKNCPLPRKVRRCFLCSRRGHLLYSCPAP 129
>AK026264-1|BAB15418.1| 454|Homo sapiens protein ( Homo sapiens
cDNA: FLJ22611 fis, clone HSI04961. ).
Length = 454
Score = 31.9 bits (69), Expect = 2.8
Identities = 14/39 (35%), Positives = 18/39 (46%), Gaps = 4/39 (10%)
Frame = -2
Query: 551 CHRCQAFGHASNNC---HRAVRCVRCAGE-HIVADCPRP 447
C C GH S NC + RC C+ H++ CP P
Sbjct: 243 CRNCDKRGHLSKNCPLPRKVRRCFLCSRRGHLLYSCPAP 281
>AB209571-1|BAD92808.1| 1463|Homo sapiens alpha 1 type XVI collagen
precursor variant protein.
Length = 1463
Score = 31.9 bits (69), Expect = 2.8
Identities = 17/40 (42%), Positives = 19/40 (47%)
Frame = -1
Query: 231 PPFPSG*YSTCHRGGQRNSGYPDGRGEPSTTGHKAPPGPP 112
PP P+G RG Q NSG +G G PPGPP
Sbjct: 989 PPGPAG--PRGERGPQGNSGEKGDQGFQGQPGFPGPPGPP 1026
Score = 31.9 bits (69), Expect = 2.8
Identities = 16/39 (41%), Positives = 18/39 (46%)
Frame = -1
Query: 228 PFPSG*YSTCHRGGQRNSGYPDGRGEPSTTGHKAPPGPP 112
P P G ST G + G +G P GH PPGPP
Sbjct: 1122 PGPPG--STGRPGAEGEPGAMGPQGRPGPPGHVGPPGPP 1158
Score = 30.3 bits (65), Expect = 8.7
Identities = 18/54 (33%), Positives = 23/54 (42%), Gaps = 4/54 (7%)
Frame = -1
Query: 264 EGQGQGKEFTSPPFPSG*YSTCHRGGQRN----SGYPDGRGEPSTTGHKAPPGP 115
EG + F PP P G + GQ +G P G G+ + G PPGP
Sbjct: 1211 EGPPGKQGFYGPPGPKGDPGAAGQKGQAGEKGRAGMPGGPGKSGSMGPVGPPGP 1264
>Z95116-3|CAI17988.1| 423|Homo sapiens protein ( Human DNA sequence
from clone CTA-57G9 on chromosome 22q12.1. ).
Length = 423
Score = 31.5 bits (68), Expect = 3.7
Identities = 17/40 (42%), Positives = 18/40 (45%)
Frame = -1
Query: 231 PPFPSG*YSTCHRGGQRNSGYPDGRGEPSTTGHKAPPGPP 112
PP P G + R G G P RG P G PPGPP
Sbjct: 204 PPGPQGPPGSPGRAGA--VGTPGERGPPGPPGPPGPPGPP 241
>CR456407-1|CAG30293.1| 443|Homo sapiens bK984G1.1 protein.
Length = 443
Score = 31.5 bits (68), Expect = 3.7
Identities = 17/40 (42%), Positives = 18/40 (45%)
Frame = -1
Query: 231 PPFPSG*YSTCHRGGQRNSGYPDGRGEPSTTGHKAPPGPP 112
PP P G + R G G P RG P G PPGPP
Sbjct: 224 PPGPQGPPGSPGRAGA--VGTPGERGPPGPPGPPGPPGPP 261
>BC047305-1|AAH47305.1| 1075|Homo sapiens COL4A1 protein protein.
Length = 1075
Score = 31.5 bits (68), Expect = 3.7
Identities = 15/40 (37%), Positives = 18/40 (45%)
Frame = -1
Query: 237 TSPPFPSG*YSTCHRGGQRNSGYPDGRGEPSTTGHKAPPG 118
T PP P G G + +G+P G G P G K PG
Sbjct: 6 TGPPGPPGYGPAGPIGDKGQAGFPGGPGSPGLPGPKGEPG 45
>BC046358-1|AAH46358.1| 443|Homo sapiens EMI domain containing 1
protein.
Length = 443
Score = 31.5 bits (68), Expect = 3.7
Identities = 17/40 (42%), Positives = 18/40 (45%)
Frame = -1
Query: 231 PPFPSG*YSTCHRGGQRNSGYPDGRGEPSTTGHKAPPGPP 112
PP P G + R G G P RG P G PPGPP
Sbjct: 224 PPGPQGPPGSPGRAGA--VGTPGERGPPGPPGPPGPPGPP 261
>BC012062-1|AAH12062.1| 407|Homo sapiens DAZ associated protein 1
protein.
Length = 407
Score = 31.5 bits (68), Expect = 3.7
Identities = 19/50 (38%), Positives = 23/50 (46%), Gaps = 2/50 (4%)
Frame = -1
Query: 255 GQGKEFTSPPFPSG*YSTCHRGGQRNSGYPDGRGEPS--TTGHKAPPGPP 112
G+G PPF S ST G G+P G G P + G+ PP PP
Sbjct: 252 GRGAPPPPPPFTSYIVSTPPGGFPPPQGFPQGYGAPPQFSFGYGPPPPPP 301
>AY675556-1|AAV91783.1| 474|Homo sapiens myocyte enhancer factor
2D/deleted in azoospermia associated protein 1 fusion p
protein.
Length = 474
Score = 31.5 bits (68), Expect = 3.7
Identities = 19/50 (38%), Positives = 23/50 (46%), Gaps = 2/50 (4%)
Frame = -1
Query: 255 GQGKEFTSPPFPSG*YSTCHRGGQRNSGYPDGRGEPS--TTGHKAPPGPP 112
G+G PPF S ST G G+P G G P + G+ PP PP
Sbjct: 319 GRGAPPPPPPFTSYIVSTPPGGFPPPQGFPQGYGAPPQFSFGYGPPPPPP 368
>AL031186-3|CAI18002.1| 423|Homo sapiens protein ( Human DNA
sequence from clone CTA-984G1 on chromosome
22q12.1-12.2. ).
Length = 423
Score = 31.5 bits (68), Expect = 3.7
Identities = 17/40 (42%), Positives = 18/40 (45%)
Frame = -1
Query: 231 PPFPSG*YSTCHRGGQRNSGYPDGRGEPSTTGHKAPPGPP 112
PP P G + R G G P RG P G PPGPP
Sbjct: 204 PPGPQGPPGSPGRAGA--VGTPGERGPPGPPGPPGPPGPP 241
>AK056850-1|BAB71295.1| 289|Homo sapiens protein ( Homo sapiens
cDNA FLJ32288 fis, clone PROST2000325, highly similar to
Homo sapiens DAZ associated protein 1 (DAZAP1) mRNA. ).
Length = 289
Score = 31.5 bits (68), Expect = 3.7
Identities = 19/50 (38%), Positives = 23/50 (46%), Gaps = 2/50 (4%)
Frame = -1
Query: 255 GQGKEFTSPPFPSG*YSTCHRGGQRNSGYPDGRGEPS--TTGHKAPPGPP 112
G+G PPF S ST G G+P G G P + G+ PP PP
Sbjct: 163 GRGAPPPPPPFTSYIVSTPPGGFPPPQGFPQGYGAPPQFSFGYGPPPPPP 212
>AJ416090-1|CAC94777.1| 441|Homo sapiens putative emu1 protein
protein.
Length = 441
Score = 31.5 bits (68), Expect = 3.7
Identities = 17/40 (42%), Positives = 18/40 (45%)
Frame = -1
Query: 231 PPFPSG*YSTCHRGGQRNSGYPDGRGEPSTTGHKAPPGPP 112
PP P G + R G G P RG P G PPGPP
Sbjct: 222 PPGPQGPPGSPGRAGA--VGTPGERGPPGPPGPPGPPGPP 259
>AF181719-1|AAF78364.1| 407|Homo sapiens DAZ associated protein 1
protein.
Length = 407
Score = 31.5 bits (68), Expect = 3.7
Identities = 19/50 (38%), Positives = 23/50 (46%), Gaps = 2/50 (4%)
Frame = -1
Query: 255 GQGKEFTSPPFPSG*YSTCHRGGQRNSGYPDGRGEPS--TTGHKAPPGPP 112
G+G PPF S ST G G+P G G P + G+ PP PP
Sbjct: 252 GRGAPPPPPPFTSYIVSTPPGGFPPPQGFPQGYGAPPQFSFGYGPPPPPP 301
>AF177941-1|AAF59902.1| 1745|Homo sapiens collagen type V alpha 3
chain protein.
Length = 1745
Score = 31.5 bits (68), Expect = 3.7
Identities = 15/39 (38%), Positives = 17/39 (43%)
Frame = -1
Query: 231 PPFPSG*YSTCHRGGQRNSGYPDGRGEPSTTGHKAPPGP 115
P FP H+G G+P RGE G PPGP
Sbjct: 877 PGFPGPKGPPGHQGKDGRPGHPGQRGELGFQGQTGPPGP 915
>AB209175-1|BAD92412.1| 1658|Homo sapiens collagen, type V, alpha 3
preproprotein variant protein.
Length = 1658
Score = 31.5 bits (68), Expect = 3.7
Identities = 15/39 (38%), Positives = 17/39 (43%)
Frame = -1
Query: 231 PPFPSG*YSTCHRGGQRNSGYPDGRGEPSTTGHKAPPGP 115
P FP H+G G+P RGE G PPGP
Sbjct: 790 PGFPGPKGPPGHQGKDGRPGHPGQRGELGFQGQTGPPGP 828
>Y13468-1|CAA73868.1| 114|Homo sapiens basic fibroblast growth
factor protein.
Length = 114
Score = 31.1 bits (67), Expect = 5.0
Identities = 24/75 (32%), Positives = 31/75 (41%), Gaps = 5/75 (6%)
Frame = -1
Query: 366 GADDGGHYSSPRTASEARRSSPYPCSTSRTKSISEGQGQGKEFTSPPFPSG*YST----- 202
G G ++PR A AR S P P T SI+ ++ S FP G +
Sbjct: 29 GRGRGRGTAAPRAAPAARGSRPGPAGTMAAGSITTLPALPEDGGSGAFPPGHFKDPKRLY 88
Query: 201 CHRGGQRNSGYPDGR 157
C GG +PDGR
Sbjct: 89 CKNGGFFLRIHPDGR 103
>S81809-1|AAB21432.2| 114|Homo sapiens basic fibroblast growth
factor protein.
Length = 114
Score = 31.1 bits (67), Expect = 5.0
Identities = 24/75 (32%), Positives = 31/75 (41%), Gaps = 5/75 (6%)
Frame = -1
Query: 366 GADDGGHYSSPRTASEARRSSPYPCSTSRTKSISEGQGQGKEFTSPPFPSG*YST----- 202
G G ++PR A AR S P P T SI+ ++ S FP G +
Sbjct: 29 GRGRGRGTAAPRAAPAARGSRPGPAGTMAAGSITTLPALPEDGGSGAFPPGHFKDPKRLY 88
Query: 201 CHRGGQRNSGYPDGR 157
C GG +PDGR
Sbjct: 89 CKNGGFFLRIHPDGR 103
>J04513-2|AAA52532.1| 196|Homo sapiens FGF2 protein.
Length = 196
Score = 31.1 bits (67), Expect = 5.0
Identities = 24/75 (32%), Positives = 31/75 (41%), Gaps = 5/75 (6%)
Frame = -1
Query: 366 GADDGGHYSSPRTASEARRSSPYPCSTSRTKSISEGQGQGKEFTSPPFPSG*YST----- 202
G G ++PR A AR S P P T SI+ ++ S FP G +
Sbjct: 15 GRGRGRGTAAPRAAPAARGSRPGPAGTMAAGSITTLPALPEDGGSGAFPPGHFKDPKRLY 74
Query: 201 CHRGGQRNSGYPDGR 157
C GG +PDGR
Sbjct: 75 CKNGGFFLRIHPDGR 89
>J04513-1|AAA52531.1| 210|Homo sapiens FGF2 protein.
Length = 210
Score = 31.1 bits (67), Expect = 5.0
Identities = 24/75 (32%), Positives = 31/75 (41%), Gaps = 5/75 (6%)
Frame = -1
Query: 366 GADDGGHYSSPRTASEARRSSPYPCSTSRTKSISEGQGQGKEFTSPPFPSG*YST----- 202
G G ++PR A AR S P P T SI+ ++ S FP G +
Sbjct: 29 GRGRGRGTAAPRAAPAARGSRPGPAGTMAAGSITTLPALPEDGGSGAFPPGHFKDPKRLY 88
Query: 201 CHRGGQRNSGYPDGR 157
C GG +PDGR
Sbjct: 89 CKNGGFFLRIHPDGR 103
>BC065530-1|AAH65530.1| 1003|Homo sapiens methyl-CpG binding domain
protein 6 protein.
Length = 1003
Score = 31.1 bits (67), Expect = 5.0
Identities = 21/55 (38%), Positives = 28/55 (50%), Gaps = 3/55 (5%)
Frame = +3
Query: 303 GLTGAPRWRYGGRNSDPHHPRPPAVE-HTPLVNSGVALPA--VGADEGSLPWPRA 458
G + +PR+ G P P PPA+ + P N G AL + V +D GS P P A
Sbjct: 196 GGSSSPRFLPRGNAPSPAPPPPPAISLNAPSYNWGAALRSSLVPSDLGSPPAPHA 250
>AL161779-2|CAI42091.1| 1478|Homo sapiens IQ motif and Sec7 domain 2
protein.
Length = 1478
Score = 31.1 bits (67), Expect = 5.0
Identities = 14/31 (45%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
Frame = +3
Query: 303 GLTGAPRWRY-GGRNSDPHHPRPPAVEHTPL 392
G G P R GG S PHHP+ P H+P+
Sbjct: 1391 GAAGGPGSRPPGGSYSHPHHPQSPLSPHSPI 1421
>AL139396-1|CAI39832.1| 1478|Homo sapiens IQ motif and Sec7 domain 2
protein.
Length = 1478
Score = 31.1 bits (67), Expect = 5.0
Identities = 14/31 (45%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
Frame = +3
Query: 303 GLTGAPRWRY-GGRNSDPHHPRPPAVEHTPL 392
G G P R GG S PHHP+ P H+P+
Sbjct: 1391 GAAGGPGSRPPGGSYSHPHHPQSPLSPHSPI 1421
>AK056399-1|BAB71176.1| 1003|Homo sapiens protein ( Homo sapiens
cDNA FLJ31837 fis, clone NT2RP7000069, weakly similar to
MUCIN 1 PRECURSOR. ).
Length = 1003
Score = 31.1 bits (67), Expect = 5.0
Identities = 21/55 (38%), Positives = 28/55 (50%), Gaps = 3/55 (5%)
Frame = +3
Query: 303 GLTGAPRWRYGGRNSDPHHPRPPAVE-HTPLVNSGVALPA--VGADEGSLPWPRA 458
G + +PR+ G P P PPA+ + P N G AL + V +D GS P P A
Sbjct: 196 GGSSSPRFLPRGNAPSPAPPPPPAISLNAPSYNWGAALRSSLVPSDLGSPPAPHA 250
>AF229122-1|AAF43200.1| 291|Homo sapiens acetylcholinesterase
collagen-like tail subunit isoform VI protein.
Length = 291
Score = 31.1 bits (67), Expect = 5.0
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = -1
Query: 189 GQRNSGYPDGRGEPSTTGHKAPPGPPFNQQGRD*SPTHCT 70
GQ+ P +GEP GH+ P G P ++G+ S T CT
Sbjct: 210 GQKGEMGP--KGEPGIAGHRGPTGRP-GKRGKQSSRTPCT 246
>AB067474-1|BAB67780.1| 967|Homo sapiens KIAA1887 protein protein.
Length = 967
Score = 31.1 bits (67), Expect = 5.0
Identities = 21/55 (38%), Positives = 28/55 (50%), Gaps = 3/55 (5%)
Frame = +3
Query: 303 GLTGAPRWRYGGRNSDPHHPRPPAVE-HTPLVNSGVALPA--VGADEGSLPWPRA 458
G + +PR+ G P P PPA+ + P N G AL + V +D GS P P A
Sbjct: 160 GGSSSPRFLPRGNAPSPAPPPPPAISLNAPSYNWGAALRSSLVPSDLGSPPAPHA 214
>AB011094-1|BAA25448.1| 1560|Homo sapiens KIAA0522 protein protein.
Length = 1560
Score = 31.1 bits (67), Expect = 5.0
Identities = 14/31 (45%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
Frame = +3
Query: 303 GLTGAPRWRY-GGRNSDPHHPRPPAVEHTPL 392
G G P R GG S PHHP+ P H+P+
Sbjct: 1468 GAAGGPGSRPPGGSYSHPHHPQSPLSPHSPI 1498
>Y17397-1|CAA76763.1| 1690|Homo sapiens collagen alpha 4 type IV
protein.
Length = 1690
Score = 30.7 bits (66), Expect = 6.5
Identities = 27/97 (27%), Positives = 34/97 (35%), Gaps = 8/97 (8%)
Frame = -1
Query: 378 LPQEGADDGGHYSSPRTASEARRSSPYPCSTSRTKSISEGQGQGKEFTSPPFPSG*YSTC 199
L E D G SP ++ P P +S + G+ + P P G
Sbjct: 1208 LKGERGDPGSPGISP-PGPRGKKGPPGPPGSSGPPGPAGATGRAPKDIPDPGPPGDQGPP 1266
Query: 198 HRGGQRNSGYPDG--------RGEPSTTGHKAPPGPP 112
G R + P G RGEP G PPGPP
Sbjct: 1267 GPDGPRGAPGPPGLPGSVDLLRGEPGDCGLPGPPGPP 1303
>Y11710-1|CAA72402.1| 755|Homo sapiens collagen type XIV protein.
Length = 755
Score = 30.7 bits (66), Expect = 6.5
Identities = 21/64 (32%), Positives = 27/64 (42%), Gaps = 1/64 (1%)
Frame = -1
Query: 303 PYPCSTSRTKSISEGQGQGKEFTSPPFPSG*YSTCHRGGQRNSGYPDG-RGEPSTTGHKA 127
P+ CS S T ++ G PP G + G+ PDG RGE G +
Sbjct: 423 PHSCSCSETNEVALGPA------GPPGGPGLRGPKGQQGEPGPKGPDGPRGEIGLPGPQG 476
Query: 126 PPGP 115
PPGP
Sbjct: 477 PPGP 480
>X81053-1|CAA56943.1| 1690|Homo sapiens type IV collagen alpha 4 chain
protein.
Length = 1690
Score = 30.7 bits (66), Expect = 6.5
Identities = 27/97 (27%), Positives = 34/97 (35%), Gaps = 8/97 (8%)
Frame = -1
Query: 378 LPQEGADDGGHYSSPRTASEARRSSPYPCSTSRTKSISEGQGQGKEFTSPPFPSG*YSTC 199
L E D G SP ++ P P +S + G+ + P P G
Sbjct: 1208 LKGERGDPGSPGISP-PGPRGKKGPPGPPGSSGPPGPAGATGRAPKDIPDPGPPGDQGPP 1266
Query: 198 HRGGQRNSGYPDG--------RGEPSTTGHKAPPGPP 112
G R + P G RGEP G PPGPP
Sbjct: 1267 GPDGPRGAPGPPGLPGSVDLLRGEPGDCGLPGPPGPP 1303
>X13783-1|CAA32030.1| 714|Homo sapiens alpha-1 type 2 collagen (714
AA) protein.
Length = 714
Score = 30.7 bits (66), Expect = 6.5
Identities = 16/38 (42%), Positives = 19/38 (50%)
Frame = -1
Query: 231 PPFPSG*YSTCHRGGQRNSGYPDGRGEPSTTGHKAPPG 118
PP PSG +G + +SG P GEP G PPG
Sbjct: 419 PPGPSG--KDGPKGARGDSGPPGRAGEPGLQGPAGPPG 454
>U15306-1|AAA69517.1| 1104|Homo sapiens NFX1 protein.
Length = 1104
Score = 30.7 bits (66), Expect = 6.5
Identities = 18/54 (33%), Positives = 22/54 (40%)
Frame = -2
Query: 560 PAQCHRCQAFGHASNNCHRAVRCVRCAGEHIVADCPRPREGPFICANCGKGHAA 399
P C C AF + C R VRC G+ + C P E NCG+ A
Sbjct: 447 PGPCPPCPAFMTKTCECGRTRHTVRC-GQAVSVHCSNPCEN---ILNCGQHQCA 496
>M59227-1|AAB59383.1| 155|Homo sapiens alpha-1 type III collagen
protein.
Length = 155
Score = 30.7 bits (66), Expect = 6.5
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = -1
Query: 192 GGQRNSGYPDGRGEPSTTGHKAPPGPP 112
GG +G+P RG P G PGPP
Sbjct: 7 GGPGAAGFPGARGLPGPPGSNGNPGPP 33
>BC083495-1|AAH83495.1| 388|Homo sapiens COL14A1 protein protein.
Length = 388
Score = 30.7 bits (66), Expect = 6.5
Identities = 21/64 (32%), Positives = 27/64 (42%), Gaps = 1/64 (1%)
Frame = -1
Query: 303 PYPCSTSRTKSISEGQGQGKEFTSPPFPSG*YSTCHRGGQRNSGYPDG-RGEPSTTGHKA 127
P+ CS S T ++ G PP G + G+ PDG RGE G +
Sbjct: 40 PHSCSCSETNEVALGPA------GPPGGPGLRGPKGQQGEPGPKGPDGPRGEIGLPGPQG 93
Query: 126 PPGP 115
PPGP
Sbjct: 94 PPGP 97
>BC053648-1|AAH53648.1| 891|Homo sapiens TBC1D1 protein protein.
Length = 891
Score = 30.7 bits (66), Expect = 6.5
Identities = 21/56 (37%), Positives = 28/56 (50%)
Frame = -1
Query: 579 MASKPRTCAVSSLPGLRTRLQQLPPSSPLRAMCG*AHCGGLPEAKGGTLHLRQLRE 412
+A+ + C SS + L +LPP SPL +C G PE K T R+LRE
Sbjct: 392 VATPQKACDSSSRYEDYSELGELPPRSPLEPVCEDGPFGPPPEEKKRT--SRELRE 445
>BC050321-1|AAH50321.3| 1168|Homo sapiens TBC1 (tre-2/USP6, BUB2,
cdc16) domain family, member 1 protein.
Length = 1168
Score = 30.7 bits (66), Expect = 6.5
Identities = 21/56 (37%), Positives = 28/56 (50%)
Frame = -1
Query: 579 MASKPRTCAVSSLPGLRTRLQQLPPSSPLRAMCG*AHCGGLPEAKGGTLHLRQLRE 412
+A+ + C SS + L +LPP SPL +C G PE K T R+LRE
Sbjct: 669 VATPQKACDSSSRYEDYSELGELPPRSPLEPVCEDGPFGPPPEEKKRT--SRELRE 722
>BC027891-1|AAH27891.1| 172|Homo sapiens GATA6 protein protein.
Length = 172
Score = 30.7 bits (66), Expect = 6.5
Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = -1
Query: 246 KEFTSPPFP-SG*YSTCHRGGQRNSGYPDGRGEPSTTGHKAPPGPP 112
+E ++PP P S S+C RGG+R G G P +A GPP
Sbjct: 30 REPSTPPSPISSSSSSCSRGGERGPGGASNCGTPQ-LDTEAAAGPP 74
>BC014640-1|AAH14640.1| 759|Homo sapiens COL14A1 protein protein.
Length = 759
Score = 30.7 bits (66), Expect = 6.5
Identities = 21/64 (32%), Positives = 27/64 (42%), Gaps = 1/64 (1%)
Frame = -1
Query: 303 PYPCSTSRTKSISEGQGQGKEFTSPPFPSG*YSTCHRGGQRNSGYPDG-RGEPSTTGHKA 127
P+ CS S T ++ G PP G + G+ PDG RGE G +
Sbjct: 411 PHSCSCSETNEVALGPA------GPPGGPGLRGPKGQQGEPGPKGPDGPRGEIGLPGPQG 464
Query: 126 PPGP 115
PPGP
Sbjct: 465 PPGP 468
>BC014529-1|AAH14529.1| 900|Homo sapiens TBC1D1 protein protein.
Length = 900
Score = 30.7 bits (66), Expect = 6.5
Identities = 21/56 (37%), Positives = 28/56 (50%)
Frame = -1
Query: 579 MASKPRTCAVSSLPGLRTRLQQLPPSSPLRAMCG*AHCGGLPEAKGGTLHLRQLRE 412
+A+ + C SS + L +LPP SPL +C G PE K T R+LRE
Sbjct: 401 VATPQKACDSSSRYEDYSELGELPPRSPLEPVCEDGPFGPPPEEKKRT--SRELRE 454
>BC012151-1|AAH12151.1| 1120|Homo sapiens nuclear transcription
factor, X-box binding 1 protein.
Length = 1120
Score = 30.7 bits (66), Expect = 6.5
Identities = 18/54 (33%), Positives = 22/54 (40%)
Frame = -2
Query: 560 PAQCHRCQAFGHASNNCHRAVRCVRCAGEHIVADCPRPREGPFICANCGKGHAA 399
P C C AF + C R VRC G+ + C P E NCG+ A
Sbjct: 463 PGPCPPCPAFMTKTCECGRTRHTVRC-GQAVSVHCSNPCEN---ILNCGQHQCA 512
>BC006447-1|AAH06447.1| 681|Homo sapiens NFX1 protein protein.
Length = 681
Score = 30.7 bits (66), Expect = 6.5
Identities = 18/54 (33%), Positives = 22/54 (40%)
Frame = -2
Query: 560 PAQCHRCQAFGHASNNCHRAVRCVRCAGEHIVADCPRPREGPFICANCGKGHAA 399
P C C AF + C R VRC G+ + C P E NCG+ A
Sbjct: 347 PGPCPPCPAFMTKTCECGRTRHTVRC-GQAVSVHCSNPCEN---ILNCGQHQCA 396
>AL356472-7|CAH72747.3| 833|Homo sapiens nuclear transcription
factor, X-box binding 1 protein.
Length = 833
Score = 30.7 bits (66), Expect = 6.5
Identities = 18/54 (33%), Positives = 22/54 (40%)
Frame = -2
Query: 560 PAQCHRCQAFGHASNNCHRAVRCVRCAGEHIVADCPRPREGPFICANCGKGHAA 399
P C C AF + C R VRC G+ + C P E NCG+ A
Sbjct: 463 PGPCPPCPAFMTKTCECGRTRHTVRC-GQAVSVHCSNPCEN---ILNCGQHQCA 512
>AL356472-6|CAH72746.1| 1120|Homo sapiens nuclear transcription
factor, X-box binding 1 protein.
Length = 1120
Score = 30.7 bits (66), Expect = 6.5
Identities = 18/54 (33%), Positives = 22/54 (40%)
Frame = -2
Query: 560 PAQCHRCQAFGHASNNCHRAVRCVRCAGEHIVADCPRPREGPFICANCGKGHAA 399
P C C AF + C R VRC G+ + C P E NCG+ A
Sbjct: 463 PGPCPPCPAFMTKTCECGRTRHTVRC-GQAVSVHCSNPCEN---ILNCGQHQCA 512
>AL356472-5|CAH72745.1| 1024|Homo sapiens nuclear transcription
factor, X-box binding 1 protein.
Length = 1024
Score = 30.7 bits (66), Expect = 6.5
Identities = 18/54 (33%), Positives = 22/54 (40%)
Frame = -2
Query: 560 PAQCHRCQAFGHASNNCHRAVRCVRCAGEHIVADCPRPREGPFICANCGKGHAA 399
P C C AF + C R VRC G+ + C P E NCG+ A
Sbjct: 463 PGPCPPCPAFMTKTCECGRTRHTVRC-GQAVSVHCSNPCEN---ILNCGQHQCA 512
>AL356218-4|CAI13305.1| 1120|Homo sapiens nuclear transcription
factor, X-box binding 1 protein.
Length = 1120
Score = 30.7 bits (66), Expect = 6.5
Identities = 18/54 (33%), Positives = 22/54 (40%)
Frame = -2
Query: 560 PAQCHRCQAFGHASNNCHRAVRCVRCAGEHIVADCPRPREGPFICANCGKGHAA 399
P C C AF + C R VRC G+ + C P E NCG+ A
Sbjct: 463 PGPCPPCPAFMTKTCECGRTRHTVRC-GQAVSVHCSNPCEN---ILNCGQHQCA 512
>AL356218-3|CAI13304.1| 1024|Homo sapiens nuclear transcription
factor, X-box binding 1 protein.
Length = 1024
Score = 30.7 bits (66), Expect = 6.5
Identities = 18/54 (33%), Positives = 22/54 (40%)
Frame = -2
Query: 560 PAQCHRCQAFGHASNNCHRAVRCVRCAGEHIVADCPRPREGPFICANCGKGHAA 399
P C C AF + C R VRC G+ + C P E NCG+ A
Sbjct: 463 PGPCPPCPAFMTKTCECGRTRHTVRC-GQAVSVHCSNPCEN---ILNCGQHQCA 512
>AK223547-1|BAD97267.1| 595|Homo sapiens GATA binding protein 6
variant protein.
Length = 595
Score = 30.7 bits (66), Expect = 6.5
Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = -1
Query: 246 KEFTSPPFP-SG*YSTCHRGGQRNSGYPDGRGEPSTTGHKAPPGPP 112
+E ++PP P S S+C RGG+R G G P +A GPP
Sbjct: 30 REPSTPPSPISSSSSSCSRGGERGPGGASNCGTPQ-LDTEAAAGPP 74
>AK027355-1|BAB55057.1| 674|Homo sapiens protein ( Homo sapiens
cDNA FLJ14449 fis, clone HEMBB1001684. ).
Length = 674
Score = 30.7 bits (66), Expect = 6.5
Identities = 21/56 (37%), Positives = 28/56 (50%)
Frame = -1
Query: 579 MASKPRTCAVSSLPGLRTRLQQLPPSSPLRAMCG*AHCGGLPEAKGGTLHLRQLRE 412
+A+ + C SS + L +LPP SPL +C G PE K T R+LRE
Sbjct: 175 VATPQKACDSSSRYEDYSELGELPPRSPLEPVCEDGPFGPPPEEKKRT--SRELRE 228
>AJ606308-1|CAE54436.1| 4262|Homo sapiens secreted mucin MUC17
protein.
Length = 4262
Score = 30.7 bits (66), Expect = 6.5
Identities = 18/53 (33%), Positives = 24/53 (45%)
Frame = -3
Query: 547 IAARPSDTPPTTATEQSAACDVRVSTLWRTARGQGRDPSSAPTAGRATPLLTS 389
+ + P+ T P +E S V T T +PSS PT AT +LTS
Sbjct: 336 LTSTPASTMPVATSEMSTLSITPVDT--STLVTTSTEPSSLPTTAEATSMLTS 386
>AJ606307-1|CAE54435.1| 4493|Homo sapiens membrane mucin MUC17
protein.
Length = 4493
Score = 30.7 bits (66), Expect = 6.5
Identities = 18/53 (33%), Positives = 24/53 (45%)
Frame = -3
Query: 547 IAARPSDTPPTTATEQSAACDVRVSTLWRTARGQGRDPSSAPTAGRATPLLTS 389
+ + P+ T P +E S V T T +PSS PT AT +LTS
Sbjct: 336 LTSTPASTMPVATSEMSTLSITPVDT--STLVTTSTEPSSLPTTAEATSMLTS 386
>AF332009-1|AAK16545.1| 1024|Homo sapiens nuclear transcription
factor NFX2 protein.
Length = 1024
Score = 30.7 bits (66), Expect = 6.5
Identities = 18/54 (33%), Positives = 22/54 (40%)
Frame = -2
Query: 560 PAQCHRCQAFGHASNNCHRAVRCVRCAGEHIVADCPRPREGPFICANCGKGHAA 399
P C C AF + C R VRC G+ + C P E NCG+ A
Sbjct: 463 PGPCPPCPAFMTKTCECGRTRHTVRC-GQAVSVHCSNPCEN---ILNCGQHQCA 512
>AC079235-1|AAY14670.1| 1324|Homo sapiens unknown protein.
Length = 1324
Score = 30.7 bits (66), Expect = 6.5
Identities = 27/97 (27%), Positives = 34/97 (35%), Gaps = 8/97 (8%)
Frame = -1
Query: 378 LPQEGADDGGHYSSPRTASEARRSSPYPCSTSRTKSISEGQGQGKEFTSPPFPSG*YSTC 199
L E D G SP ++ P P +S + G+ + P P G
Sbjct: 1208 LKGERGDPGSPGISP-PGPRGKKGPPGPPGSSGPPGPAGATGRAPKDIPDPGPPGDQGPP 1266
Query: 198 HRGGQRNSGYPDG--------RGEPSTTGHKAPPGPP 112
G R + P G RGEP G PPGPP
Sbjct: 1267 GPDGPRGAPGPPGLPGSVDLLRGEPGDCGLPGPPGPP 1303
>AB209284-1|BAD92521.1| 352|Homo sapiens tripartite
motif-containing 39 isoform 2 variant protein.
Length = 352
Score = 30.7 bits (66), Expect = 6.5
Identities = 21/68 (30%), Positives = 26/68 (38%)
Frame = -1
Query: 429 LRQLREGPRRC*QAVCVLPQEGADDGGHYSSPRTASEARRSSPYPCSTSRTKSISEGQGQ 250
LR L + PRR CVL EG G HY + + C S ++ G G
Sbjct: 277 LRDLPDTPRRFTFYPCVLATEGFTSGRHYWEVEVGDKTHWAVGV-CRDSVSRKGGCGYGM 335
Query: 249 GKEFTSPP 226
G PP
Sbjct: 336 GTNMQPPP 343
>AB029031-1|BAA83060.1| 763|Homo sapiens KIAA1108 protein protein.
Length = 763
Score = 30.7 bits (66), Expect = 6.5
Identities = 21/56 (37%), Positives = 28/56 (50%)
Frame = -1
Query: 579 MASKPRTCAVSSLPGLRTRLQQLPPSSPLRAMCG*AHCGGLPEAKGGTLHLRQLRE 412
+A+ + C SS + L +LPP SPL +C G PE K T R+LRE
Sbjct: 264 VATPQKACDSSSRYEDYSELGELPPRSPLEPVCEDGPFGPPPEEKKRT--SRELRE 317
>M23618-1|AAA88076.1| 95|Homo sapiens high mobility group protein
protein.
Length = 95
Score = 30.3 bits (65), Expect = 8.7
Identities = 24/75 (32%), Positives = 35/75 (46%), Gaps = 4/75 (5%)
Frame = -1
Query: 324 SEARRSSPYPCSTSRTKSISEGQGQGKEFTSPPFPSG*YSTCH-RG---GQRNSGYPDGR 157
SE+ S P ++ + K +E +G+G+ PP PS + RG G +N G R
Sbjct: 2 SESSSKSSQPLASKQEKDGTEKRGRGRPRKQPPEPSEVPTPKRPRGRPKGSKNKGAAKTR 61
Query: 156 GEPSTTGHKAPPGPP 112
+T G K P G P
Sbjct: 62 KTTTTPGRK-PRGRP 75
>L49169-1|AAB53946.1| 338|Homo sapiens G0S3 protein.
Length = 338
Score = 30.3 bits (65), Expect = 8.7
Identities = 22/58 (37%), Positives = 26/58 (44%), Gaps = 7/58 (12%)
Frame = -1
Query: 267 SEGQGQGKEFTSPP-------FPSG*YSTCHRGGQRNSGYPDGRGEPSTTGHKAPPGP 115
S Q QG+ S P P YST G +SG G G PST+G + PGP
Sbjct: 78 SMAQSQGQPLASQPPVVDPYDMPGTSYSTPGMSGY-SSGGASGSGGPSTSGTTSGPGP 134
>CR542101-1|CAG46898.1| 338|Homo sapiens FOSB protein.
Length = 338
Score = 30.3 bits (65), Expect = 8.7
Identities = 22/58 (37%), Positives = 26/58 (44%), Gaps = 7/58 (12%)
Frame = -1
Query: 267 SEGQGQGKEFTSPP-------FPSG*YSTCHRGGQRNSGYPDGRGEPSTTGHKAPPGP 115
S Q QG+ S P P YST G +SG G G PST+G + PGP
Sbjct: 78 SMAQSQGQPLASQPPVVDPYDMPGTSYSTPGMSGY-SSGGASGSGGPSTSGTTSGPGP 134
>BC117319-1|AAI17320.1| 257|Homo sapiens TPRXL protein protein.
Length = 257
Score = 30.3 bits (65), Expect = 8.7
Identities = 21/88 (23%), Positives = 35/88 (39%)
Frame = -1
Query: 342 SSPRTASEARRSSPYPCSTSRTKSISEGQGQGKEFTSPPFPSG*YSTCHRGGQRNSGYPD 163
SSP ++S + SSP S+S + S S +S P S S+ +S P
Sbjct: 115 SSPSSSSSSSSSSPSSSSSSPSSSSSSSSSSPSSSSSSPSSSS-SSSSSSSSSPSSSSPS 173
Query: 162 GRGEPSTTGHKAPPGPPFNQQGRD*SPT 79
G ++ + +P + SP+
Sbjct: 174 SSGSSPSSSNSSPSSSSSSPSSSSSSPS 201
>BC040197-1|AAH40197.1| 289|Homo sapiens FOSB protein protein.
Length = 289
Score = 30.3 bits (65), Expect = 8.7
Identities = 22/58 (37%), Positives = 26/58 (44%), Gaps = 7/58 (12%)
Frame = -1
Query: 267 SEGQGQGKEFTSPP-------FPSG*YSTCHRGGQRNSGYPDGRGEPSTTGHKAPPGP 115
S Q QG+ S P P YST G +SG G G PST+G + PGP
Sbjct: 29 SMAQSQGQPLASQPPVVDPYDMPGTSYSTPGMSGY-SSGGASGSGGPSTSGTTSGPGP 85
>BC036724-1|AAH36724.1| 338|Homo sapiens FBJ murine osteosarcoma
viral oncogene homolog B protein.
Length = 338
Score = 30.3 bits (65), Expect = 8.7
Identities = 22/58 (37%), Positives = 26/58 (44%), Gaps = 7/58 (12%)
Frame = -1
Query: 267 SEGQGQGKEFTSPP-------FPSG*YSTCHRGGQRNSGYPDGRGEPSTTGHKAPPGP 115
S Q QG+ S P P YST G +SG G G PST+G + PGP
Sbjct: 78 SMAQSQGQPLASQPPVVDPYDMPGTSYSTPGMSGY-SSGGASGSGGPSTSGTTSGPGP 134
>BC001760-1|AAH01760.1| 567|Homo sapiens replication initiator 1
protein.
Length = 567
Score = 30.3 bits (65), Expect = 8.7
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = -2
Query: 455 PRPREGPFICANCGKGHAAVDK 390
P P PFIC NCG+ A D+
Sbjct: 170 PAPEARPFICGNCGRSFAQWDQ 191
>BC000363-1|AAH00363.2| 556|Homo sapiens replication initiator 1
protein.
Length = 556
Score = 30.3 bits (65), Expect = 8.7
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = -2
Query: 455 PRPREGPFICANCGKGHAAVDK 390
P P PFIC NCG+ A D+
Sbjct: 159 PAPEARPFICGNCGRSFAQWDQ 180
>AY898963-1|AAW65374.1| 338|Homo sapiens FBJ murine osteosarcoma
viral oncogene homolog B protein.
Length = 338
Score = 30.3 bits (65), Expect = 8.7
Identities = 22/58 (37%), Positives = 26/58 (44%), Gaps = 7/58 (12%)
Frame = -1
Query: 267 SEGQGQGKEFTSPP-------FPSG*YSTCHRGGQRNSGYPDGRGEPSTTGHKAPPGP 115
S Q QG+ S P P YST G +SG G G PST+G + PGP
Sbjct: 78 SMAQSQGQPLASQPPVVDPYDMPGTSYSTPGMSGY-SSGGASGSGGPSTSGTTSGPGP 134
>AK127518-1|BAC87015.1| 178|Homo sapiens protein ( Homo sapiens
cDNA FLJ45611 fis, clone BRTHA3024600. ).
Length = 178
Score = 30.3 bits (65), Expect = 8.7
Identities = 19/65 (29%), Positives = 26/65 (40%), Gaps = 1/65 (1%)
Frame = -3
Query: 544 AARPSDTPPTTATEQSAA-CDVRVSTLWRTARGQGRDPSSAPTAGRATPLLTSGVCSTAG 368
+AR T P ++S +TLWR R RD +S + G + AG
Sbjct: 55 SARQPPTAPRGGPQRSGGRAPAAPTTLWRGGRSTRRDETSLRSGGESGHPPAGETAPPAG 114
Query: 367 GRG*W 353
G G W
Sbjct: 115 GDGLW 119
>AK092426-1|BAC03887.1| 258|Homo sapiens protein ( Homo sapiens
cDNA FLJ35107 fis, clone PLACE6006871, moderately
similar to SUPPRESSOR PROTEIN SRP40. ).
Length = 258
Score = 30.3 bits (65), Expect = 8.7
Identities = 21/88 (23%), Positives = 35/88 (39%)
Frame = -1
Query: 342 SSPRTASEARRSSPYPCSTSRTKSISEGQGQGKEFTSPPFPSG*YSTCHRGGQRNSGYPD 163
SSP ++S + SSP S+S + S S +S P S S+ +S P
Sbjct: 116 SSPSSSSSSSSSSPSSSSSSPSSSSSSSSSSPSSSSSSPSSSS-SSSSSSSSSPSSSSPS 174
Query: 162 GRGEPSTTGHKAPPGPPFNQQGRD*SPT 79
G ++ + +P + SP+
Sbjct: 175 SSGSSPSSSNSSPSSSSSSPSSSSSSPS 202
>AK074500-1|BAC11025.1| 401|Homo sapiens protein ( Homo sapiens
cDNA FLJ90019 fis, clone HEMBA1000745, weakly similar to
COLLAGEN ALPHA 1(I) CHAIN. ).
Length = 401
Score = 30.3 bits (65), Expect = 8.7
Identities = 25/80 (31%), Positives = 33/80 (41%), Gaps = 5/80 (6%)
Frame = -1
Query: 375 PQEGADDGGHYSSPRTASEARRSS-----PYPCSTSRTKSISEGQGQGKEFTSPPFPSG* 211
P +G +S P+ + A SS YP S SR S SE + +G PP G
Sbjct: 210 PADGLHSWHIFSQPQAGARASCSSSSIAASYPVSRSRAASSSEEEEEG-----PPQLPGA 264
Query: 210 YSTCHRGGQRNSGYPDGRGE 151
S + GG + D GE
Sbjct: 265 QSPAYHGGHSSGSDDDRDGE 284
>AJ245553-1|CAB53100.1| 556|Homo sapiens AP4 protein protein.
Length = 556
Score = 30.3 bits (65), Expect = 8.7
Identities = 21/73 (28%), Positives = 27/73 (36%), Gaps = 1/73 (1%)
Frame = -2
Query: 605 YLPGVSVEGWRPSRGPAQCHRCQAFGHASNNCHRAVRCVRCAGEHIV-ADCPRPREGPFI 429
+L G S GW + H A C R + H+ P P PFI
Sbjct: 108 HLCGQSFRGWVALVLHLRAHSAAKRPIACPKCERRFWRRKQLRAHLQRCHPPAPAARPFI 167
Query: 428 CANCGKGHAAVDK 390
C NCG+ A D+
Sbjct: 168 CGNCGRSFAQWDQ 180
>AF378754-1|AAL11991.1| 2063|Homo sapiens tumor endothelial marker 4
protein.
Length = 2063
Score = 30.3 bits (65), Expect = 8.7
Identities = 25/80 (31%), Positives = 33/80 (41%), Gaps = 5/80 (6%)
Frame = -1
Query: 375 PQEGADDGGHYSSPRTASEARRSS-----PYPCSTSRTKSISEGQGQGKEFTSPPFPSG* 211
P +G +S P+ + A SS YP S SR S SE + +G PP G
Sbjct: 210 PADGLHSWHIFSQPQAGARASCSSSSIAASYPVSRSRAASSSEEEEEG-----PPQLPGA 264
Query: 210 YSTCHRGGQRNSGYPDGRGE 151
S + GG + D GE
Sbjct: 265 QSPAYHGGHSSGSDDDRDGE 284
>AF201303-1|AAF26712.1| 567|Homo sapiens dhfr oribeta-binding
protein RIP60 protein.
Length = 567
Score = 30.3 bits (65), Expect = 8.7
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = -2
Query: 455 PRPREGPFICANCGKGHAAVDK 390
P P PFIC NCG+ A D+
Sbjct: 170 PAPEARPFICGNCGRSFAQWDQ 191
>AC005586-2|AAS00386.1| 556|Homo sapiens unknown protein.
Length = 556
Score = 30.3 bits (65), Expect = 8.7
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = -2
Query: 455 PRPREGPFICANCGKGHAAVDK 390
P P PFIC NCG+ A D+
Sbjct: 159 PAPEARPFICGNCGRSFAQWDQ 180
>AC005586-1|AAS00385.1| 567|Homo sapiens unknown protein.
Length = 567
Score = 30.3 bits (65), Expect = 8.7
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = -2
Query: 455 PRPREGPFICANCGKGHAAVDK 390
P P PFIC NCG+ A D+
Sbjct: 170 PAPEARPFICGNCGRSFAQWDQ 191
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 126,155,509
Number of Sequences: 237096
Number of extensions: 3453832
Number of successful extensions: 26328
Number of sequences better than 10.0: 162
Number of HSP's better than 10.0 without gapping: 16079
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25539
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10092110758
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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