Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP10_T7_J10
         (813 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    25   0.63 
AF144379-1|AAD34586.1|  543|Apis mellifera glutamate transporter...    23   4.4  
EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    22   5.9  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    22   5.9  
DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chlor...    22   7.8  

>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 25.4 bits (53), Expect = 0.63
 Identities = 11/43 (25%), Positives = 19/43 (44%), Gaps = 3/43 (6%)
 Frame = -2

Query: 527 HASNNCHRAVRCVRC---AGEHIVADCPRPREGPFICANCGKG 408
           H     H+   C +    +G+ ++       E P++C  CGKG
Sbjct: 170 HTGERPHKCTVCSKTFIQSGQLVIHMRTHTGEKPYVCKACGKG 212


>AF144379-1|AAD34586.1|  543|Apis mellifera glutamate transporter
           Am-EAAT protein.
          Length = 543

 Score = 22.6 bits (46), Expect = 4.4
 Identities = 9/17 (52%), Positives = 13/17 (76%)
 Frame = +1

Query: 421 LAQMKGPSLGLGQSATM 471
           +AQM G SLG+G+  T+
Sbjct: 411 IAQMNGISLGIGEVITV 427


>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 22.2 bits (45), Expect = 5.9
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = -2

Query: 530 GHASNNCHRAVRCVRCAGEHI 468
           G A N+CH  V   RC  E++
Sbjct: 311 GGALNDCHAEVVARRCLCEYL 331


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
            protein.
          Length = 1370

 Score = 22.2 bits (45), Expect = 5.9
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = -1

Query: 561  TCAVSSLPGLRTRLQQLPPSSP 496
            +C   S+P    + QQLPPSSP
Sbjct: 1273 SCGTVSVP----QQQQLPPSSP 1290


>DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 428

 Score = 21.8 bits (44), Expect = 7.8
 Identities = 9/22 (40%), Positives = 11/22 (50%)
 Frame = -1

Query: 156 GEPSTTGHKAPPGPPFNQQGRD 91
           G+  T    APP PP +  G D
Sbjct: 333 GDSDTPPKPAPPPPPPSSSGPD 354


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 221,466
Number of Sequences: 438
Number of extensions: 5303
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25853301
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)