Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP10_T7_J09
(788 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC23E2.01 |fep1|gaf2|iron-sensing transcription factor Fep1|Sc... 29 1.0
SPAC821.09 |eng1||endo-1,3-beta-glucanase Eng1|Schizosaccharomyc... 27 3.1
SPBC26H8.13c |||sequence orphan|Schizosaccharomyces pombe|chr 2|... 27 4.0
SPAC17A5.04c |mde10|mug139|spore wall assembly peptidase Mde10|S... 27 4.0
SPBC337.12 |||human ZC3H3 homolog|Schizosaccharomyces pombe|chr ... 27 4.0
SPCC777.02 |||transcription factor |Schizosaccharomyces pombe|ch... 26 5.4
SPAC1751.01c |gti1||gluconate transporter inducer Gti1|Schizosac... 26 7.1
SPAC18G6.10 |||chromosome segregation protein |Schizosaccharomyc... 26 7.1
SPAC2F3.16 |||ubiquitin-protein ligase E3 |Schizosaccharomyces p... 25 9.4
>SPAC23E2.01 |fep1|gaf2|iron-sensing transcription factor
Fep1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 564
Score = 28.7 bits (61), Expect = 1.0
Identities = 14/37 (37%), Positives = 16/37 (43%)
Frame = -2
Query: 319 CENGRCSLDGACECDSGYILSNGTCIRNNTACSANCS 209
C+NG C+ DG C G G NN S N S
Sbjct: 65 CKNGTCAGDGFCNGTGGSASCTGCPALNNRIRSLNAS 101
>SPAC821.09 |eng1||endo-1,3-beta-glucanase Eng1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1016
Score = 27.1 bits (57), Expect = 3.1
Identities = 23/95 (24%), Positives = 31/95 (32%), Gaps = 2/95 (2%)
Frame = -2
Query: 523 NGACSEPDKCTCDDGYRLSPEDPFVCLPVCSERCVNSHCSSPNTCTCFKDYERNDTNSNV 344
NGAC P + CD+G L P + + +P T T +
Sbjct: 822 NGACYNPSQYGCDNG-ALGPVQSSSTTSSITPTPTTTSSITPTPTTTSTTTTAQSTGMQL 880
Query: 343 CYKKCDGACENGRCSLDGACECDSG--YILSNGTC 245
C A + C D C G Y+ NG C
Sbjct: 881 CGSNYYDA-SSYYCDNDQLCPIIDGVDYLSCNGAC 914
Score = 26.6 bits (56), Expect = 4.0
Identities = 18/60 (30%), Positives = 26/60 (43%)
Frame = -2
Query: 523 NGACSEPDKCTCDDGYRLSPEDPFVCLPVCSERCVNSHCSSPNTCTCFKDYERNDTNSNV 344
NGAC P + C DG LSP V + + + +P T T + T++NV
Sbjct: 911 NGACYNPSQYVCSDG-SLSPN------TVTTTKATTTFTPTPTTTTTPTPTTTSATSTNV 963
>SPBC26H8.13c |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 124
Score = 26.6 bits (56), Expect = 4.0
Identities = 13/47 (27%), Positives = 20/47 (42%)
Frame = -1
Query: 683 TCDSGYKNIDDVCVPQCLDCRNGECVAPNDCLCHDNYAMSNGTCAPC 543
TC+S K+ +C+ QC C + C + C + S C C
Sbjct: 75 TCESCKKHTCAICIRQCHKCESNVC---SMCSKQERTFESEAFCPSC 118
>SPAC17A5.04c |mde10|mug139|spore wall assembly peptidase
Mde10|Schizosaccharomyces pombe|chr 1|||Manual
Length = 512
Score = 26.6 bits (56), Expect = 4.0
Identities = 11/34 (32%), Positives = 14/34 (41%)
Frame = -2
Query: 436 CSERCVNSHCSSPNTCTCFKDYERNDTNSNVCYK 335
C E C N+ C TC K +D CY+
Sbjct: 331 CGEDCENNPCCDGKTCKLTKGSLCDDQQDACCYQ 364
>SPBC337.12 |||human ZC3H3 homolog|Schizosaccharomyces pombe|chr
2|||Manual
Length = 377
Score = 26.6 bits (56), Expect = 4.0
Identities = 17/71 (23%), Positives = 27/71 (38%)
Frame = -1
Query: 728 CERCVNGTCTEPGLCTCDSGYKNIDDVCVPQCLDCRNGECVAPNDCLCHDNYAMSNGTCA 549
C + +NG C + C +D +P C G+C PN H +Y+ + C
Sbjct: 236 CPKFLNGRCNKAEDCNLSH---ELDPRRIPACRYFLLGKCNNPNCRYVHIHYSENAPICF 292
Query: 548 PCVSSGLHKWG 516
G + G
Sbjct: 293 EFAKYGFCELG 303
>SPCC777.02 |||transcription factor |Schizosaccharomyces pombe|chr
3|||Manual
Length = 632
Score = 26.2 bits (55), Expect = 5.4
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = +2
Query: 488 ARALIGLRARPICAGPTTHRGRTCRYSWRNCRDRGNHWEPR 610
A+ L+ L I G T+H C ++R +D G H +PR
Sbjct: 260 AQCLLCLGFYKIAMGNTSHGWLLCGMAFRMGQDLGFHLDPR 300
>SPAC1751.01c |gti1||gluconate transporter inducer
Gti1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 25.8 bits (54), Expect = 7.1
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = +1
Query: 406 NSESSRSAQNRPAGRRKDPRDSTGSHRRTCTYRAPSTPH 522
NS S ++QN ++ +S G+ ++ Y A STPH
Sbjct: 579 NSNSELASQNPLYAQQAVSMESMGNAIQSSAYSAMSTPH 617
>SPAC18G6.10 |||chromosome segregation protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 688
Score = 25.8 bits (54), Expect = 7.1
Identities = 10/27 (37%), Positives = 12/27 (44%)
Frame = -2
Query: 550 PPVCRRACTNGACSEPDKCTCDDGYRL 470
P +CR N C P+ C GY L
Sbjct: 365 PSLCRTCPPNAICPSPNYVECKPGYVL 391
>SPAC2F3.16 |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 425
Score = 25.4 bits (53), Expect = 9.4
Identities = 11/32 (34%), Positives = 15/32 (46%)
Frame = -2
Query: 430 ERCVNSHCSSPNTCTCFKDYERNDTNSNVCYK 335
ER + CS P C ++Y R + CYK
Sbjct: 283 ERVIFLSCSHPLHQRCHEEYIRTNYRCPTCYK 314
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,835,615
Number of Sequences: 5004
Number of extensions: 58436
Number of successful extensions: 154
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 143
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 154
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 383374054
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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